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Xu S, Yang H, Menon V, Lemire AL, Wang L, Henry FE, Turaga SC, Sternson SM. Behavioral state coding by molecularly defined paraventricular
hypothalamic cell type ensembles. Science 2020; 370:370/6514/eabb2494. [DOI: 10.1126/science.abb2494] [Citation(s) in RCA: 51] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2020] [Accepted: 08/18/2020] [Indexed: 12/11/2022]
Abstract
Brains encode behaviors using neurons amenable to systematic
classification by gene expression. The contribution of molecular identity to
neural coding is not understood because of the challenges involved with
measuring neural dynamics and molecular information from the same cells. We
developed CaRMA (calcium and RNA multiplexed activity) imaging based on
recording in vivo single-neuron calcium dynamics followed by gene expression
analysis. We simultaneously monitored activity in hundreds of neurons in
mouse paraventricular hypothalamus (PVH). Combinations of cell-type marker
genes had predictive power for neuronal responses across 11 behavioral
states. The PVH uses combinatorial assemblies of molecularly defined neuron
populations for grouped-ensemble coding of survival behaviors. The
neuropeptide receptor neuropeptide Y receptor type 1 (Npy1r) amalgamated
multiple cell types with similar responses. Our results show that
molecularly defined neurons are important processing units for brain
function.
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Affiliation(s)
- Shengjin Xu
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Hui Yang
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
- Dominick P. Purpura Department of Neuroscience, Albert Einstein College of Medicine, Bronx, NY 10461, USA
| | - Vilas Menon
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Andrew L. Lemire
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Lihua Wang
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Fredrick E. Henry
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Srinivas C. Turaga
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Scott M. Sternson
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
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