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Blank HM, Perez R, He C, Maitra N, Metz R, Hill J, Lin Y, Johnson CD, Bankaitis VA, Kennedy BK, Aramayo R, Polymenis M. Translational control of lipogenic enzymes in the cell cycle of synchronous, growing yeast cells. EMBO J 2017; 36:487-502. [PMID: 28057705 PMCID: PMC5694946 DOI: 10.15252/embj.201695050] [Citation(s) in RCA: 49] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2016] [Revised: 11/09/2016] [Accepted: 11/18/2016] [Indexed: 02/04/2023] Open
Abstract
Translational control during cell division determines when cells start a new cell cycle, how fast they complete it, the number of successive divisions, and how cells coordinate proliferation with available nutrients. The translational efficiencies of mRNAs in cells progressing synchronously through the mitotic cell cycle, while preserving the coupling of cell division with cell growth, remain uninvestigated. We now report comprehensive ribosome profiling of a yeast cell size series from the time of cell birth, to identify mRNAs under periodic translational control. The data reveal coordinate translational activation of mRNAs encoding lipogenic enzymes late in the cell cycle including Acc1p, the rate-limiting enzyme acetyl-CoA carboxylase. An upstream open reading frame (uORF) confers the translational control of ACC1 and adjusts Acc1p protein levels in different nutrients. The ACC1 uORF is relevant for cell division because its ablation delays cell cycle progression, reduces cell size, and suppresses the replicative longevity of cells lacking the Sch9p protein kinase regulator of ribosome biogenesis. These findings establish an unexpected relationship between lipogenesis and protein synthesis in mitotic cell divisions.
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Affiliation(s)
- Heidi M Blank
- Department of Biochemistry and Biophysics, Texas A&M University, College Station, TX, USA
| | - Ricardo Perez
- Department of Biology, Texas A&M University, College Station, TX, USA
| | - Chong He
- The Buck Institute for Research on Aging, Novato, CA, USA
| | - Nairita Maitra
- Department of Biochemistry and Biophysics, Texas A&M University, College Station, TX, USA
| | - Richard Metz
- Genomics and Bioinformatics Services, Texas A&M Agrilife Research, College Station, TX, USA
| | - Joshua Hill
- Genomics and Bioinformatics Services, Texas A&M Agrilife Research, College Station, TX, USA
| | - Yuhong Lin
- Department of Biochemistry and Biophysics, Texas A&M University, College Station, TX, USA
| | - Charles D Johnson
- Genomics and Bioinformatics Services, Texas A&M Agrilife Research, College Station, TX, USA
| | - Vytas A Bankaitis
- Department of Biochemistry and Biophysics, Texas A&M University, College Station, TX, USA
- Department of Molecular & Cellular Medicine, Texas A&M Health Sciences Center, College Station, TX, USA
- Department of Chemistry, Texas A&M University, College Station, TX, USA
| | | | - Rodolfo Aramayo
- Department of Biology, Texas A&M University, College Station, TX, USA
| | - Michael Polymenis
- Department of Biochemistry and Biophysics, Texas A&M University, College Station, TX, USA
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