Aerobic methylation of hydrogen sulfide to dimethylsulfide in diverse microorganisms and environments

Virus-bacterium interaction involved in element cycles in biological treatment of coking wastewater

Although prokaryotic microbes in coking wastewater (CWW) treatment have been comprehensively studied, the ecological functions of viruses remain unclear. A full-scale CWW biological treatment AOHO combination was studied for the virus-bacterium interactions involved in element cycles by metaviromics, metagenomics and physicochemical characteristics. Results showed the unique viromic profile with Cirlivirales and Petitvirales as the dominant viruses infecting functional bacteria hosts. The auxiliary metabolic genes (AMGs) focused on element cycles, including metabolisms of carbon (fadA), nitrogen (glnA), sulfur (mddA and cysK) and phosphorus (phoH). Other AMGs were involved in toxic tolerance of hosts, improving their cell membrane and wall robustness, antioxidant, DNA repair and cobalamin biosynthesis. Vice versa, the bloomed host provided fitness advantages for viruses. Dissolved oxygen was found to be the key factor shaping the distributions of viral community and AMGs. Summarizing, the study exposed the mutual virus-bacterium interaction in the AOHO combination providing stable treatment efficiency.

Sulfide and Hydrogen Bond Networks in the Electric Double Layer: Key Factors for Titanium Passivation Film Stability

Hydrogen sulfide (H2S), carbonyl sulfide (COS), and dimethyl sulfide (DMS) are the primary sulfur compounds found in seawater, which cause pitting corrosion on the oxide passivation film of titanium, known as "the marine metals". In this study, density functional theory (DFT) was used to analyze the adsorption and surface electronic properties of these three small molecules on the anatase TiO2(101) surface. The analysis was conducted through adsorption energy, work function, Mulliken charge population, and density of states (DOS). The hydrogen bond network structure of the electric double layer (EDL) was studied for these small-molecule systems using ab initio molecular dynamics (AIMD). The optimal adsorption configurations for H2S, COS, and DMS on the anatase TiO2(101) surface are 2Ob-vertical, O-down-vertical, and Ob-parallel, with adsorption energies of -1.32, -0.67, and -1.86 eV, respectively. The surface charge transfer was also investigated. Through comparative AIMD simulations of three different aqueous solutions on the TiO2(101) surface, we observed that COS exerts a more pronounced influence on the electrical double layer within 3.00 Å of the TiO2(101) surface. Specifically, the hydrogen atoms of water tend to aggregate toward the Ob atoms, forming hydrogen bonds, which significantly impacts the corrosion resistance of the TiO2 surface.

Analysis of optical properties and response mechanism of H2S fluorescent probe based on rhodamine derivatives

H2S plays a crucial role in numerous physiological and pathological processes. In this project, a new fluorescent probe, SG-H2S, for the detection of H2S, was developed by introducing the recognition group 2,4-dinitrophenyl ether. The combination of rhodamine derivatives can produce both colorimetric reactions and fluorescence reactions. Compared with the current H2S probes, the main advantages of SG-H2S are its wide pH range (5-9), fast response (30 min), and high selectivity in competitive species (including biological mercaptan). The probe SG-H2S has low cytotoxicity and has been successfully applied to imaging in MCF-7 cells, HeLa cells, and BALB/c nude mice. We hope that SG-H2S will provide a vital method for the field of biology.

An S-methyltransferase that produces the climate-active gas dimethylsulfide is widespread across diverse marine bacteria

Hydrogen sulfide (H2S), methanethiol (MeSH) and dimethylsulfide (DMS) are abundant sulfur gases with roles in biogeochemical cycling, chemotaxis and/or climate regulation. Catabolism of the marine osmolyte dimethylsulfoniopropionate (DMSP) is a major source of DMS and MeSH, but both also result from S-methylation of H2S via MddA, an H2S and MeSH S-methyltransferase whose gene is abundant in soil but scarce in marine environments. Here we identify the S-adenosine methionine (SAM)-dependent MeSH and H2S S-methyltransferase 'MddH', which is widespread in diverse marine bacteria and some freshwater and soil bacteria. mddH is predicted in up to ~5% and ~15% of seawater and coastal sediment bacteria, respectively, which is considerably higher than mddA. Furthermore, marine mddH transcript levels are similar to those for the most abundant DMSP lyase gene dddP. This study implies that the importance of H2S and MeSH S-methylation pathways in marine environments is significantly underestimated.

Role of gasotransmitters in necroptosis

Gasotransmitters are endogenous gaseous signaling molecules that can freely pass through cell membranes and transmit signals between cells, playing multiple roles in cell signal transduction. Due to extensive and ongoing research in this field, we have successfully identified many gasotransmitters so far, among which nitric oxide, carbon monoxide, and hydrogen sulfide are best studied. Gasotransmitters are implicated in various diseases related to necroptosis, such as cardiovascular diseases, inflammation, ischemia-reperfusion, infectious diseases, and neurological diseases. However, the mechanisms of their effects on necroptosis are not fully understood. This review focuses on endogenous gasotransmitter synthesis and metabolism and discusses their roles in necroptosis, aiming to offer new insights for the therapeutic approaches to necroptosis-associated diseases.

Novel insights into dimethylsulfoniopropionate cleavage by deep subseafloor fungi

Dimethylsulfoniopropionate (DMSP), a key organic sulfur compound in marine and subseafloor sediments, is degraded by phytoplankton and bacteria, resulting in the release of the climate-active volatile gas dimethylsulfide (DMS). However, it remains unclear if dominant eukaryotic fungi in subseafloor sediments possess specific abilities and metabolic mechanisms for DMSP degradation and DMS formation. Our study provides the first evidence that fungi from coal-bearing sediments ∼2 km below the seafloor, such as Aspergillus spp., Chaetomium globosum, Cladosporium sphaerospermum, and Penicillium funiculosum, can degrade DMSP and produce DMS. In Aspergillus sydowii 29R-4-F02, which exhibited the highest DMSP-dependent DMS production rate (16.95 pmol/μg protein/min), two DMSP lyase genes, dddP and dddW, were identified. Remarkably, the dddW gene, previously observed only in bacteria, was found to be crucial for fungal DMSP cleavage. These findings not only extend the list of fungi capable of degrading DMSP, but also enhance our understanding of DMSP lyase diversity and the role of fungi in DMSP decomposition in subseafloor sedimentary ecosystems.

Evaluation of three granular activated carbon filters for the treatment of collections foul air entering a water resource recovery facility

The treatment of raw foul air that could escape to the atmosphere from the head space of the incoming wastewater sewer lines into a Southern California Water Resource Recovery Facility was evaluated by using a 1/20th scale pilot unit consisting of three different granular activated carbon filter technologies, operating side by side, under similar operating conditions, each having an average 3.8-s contact time. The three activated carbon filters contained each 0.07 m3 of coconut, coal, and coconut mixed with permanganate media. The foul air entering the granular activated carbon filters contained 82% to 83% relative humidity. No moisture removal mechanism was used prior to treatment. The removal of six different odor characters from eight chemical odorants present in the foul air were assessed. These were rotten egg (hydrogen sulfide), rotten vegetables (methyl mercaptan), canned corn (dimethyl sulfide), rotten garlic (dimethyl disulfide), earthy/musty (2-methyl isoborneol and 2-isopropyl 3-methoxy pyrazine), and fecal (skatole and indole). This is the first time a study evaluates the removal of specific odors by simultaneously employing sensory analyses using the odor profile method, which defines the different odor characters and intensities, together with chemical analyses of the odorants causing these odors. The results show that the three granular activated carbon filters, before hydrogen sulfide breakthrough, provided significant improvement in odor intensity and odorant removal. Breakthrough was reached after 57 days for the coconut mixed with permanganate, 107 days for the coconut, and 129 days for the coal granular activated carbon filter. Breakthrough (the critical saturation point of the activated carbon media) was considered reached when the hydrogen sulfide percentage removal diminished to 90% and continued downward. The coconut mixed with permanganate granular activated carbon filter provided the best treatment among the media tested, achieving very good reduction of odorants, as measured by chemical analyses, and reasonable removal of odor intensities, as measured by the odor profile method. The coconut mixed with permanganate granular activated carbon is recommended for short-term odor control systems at sewer networks or emergency plant maintenance situations given its shorter time to breakthrough compared with the other granular activated carbons. The coal and coconut granular activated carbon filters are generally used as the last stage of an odor treatment system. Because of the observed poor to average performance in removing odorants other than hydrogen sulfide, the treatment stage(s) prior to the use of these granulated activated carbons should provide a good methyl mercaptan removal of at least 90% in order to avoid the formation of dimethyl disulfide, which, in the presence of moisture in the carbon filter, emit the characteristic rotten garlic odor. The differences observed between the performances based on odorant removal by chemical analysis compared with those based on sensorial analyses by the odor profile method indicate that both analyses are required to understand more fully the odor dynamics. PRACTITIONER POINTS: Three virgin granulated activated carbon media were evaluated in a field pilot unit using raw collections foul air. Coal, coconut, and coconut mixed with permanganate were tested until breakthrough. Samples were analyzed both chemically (odorants) and sensorially (odors). Coconut mixed with permanganate proved to be the media that better reduced odorants and odors.

Quorum Sensing Regulates the Production of Methanethiol in Vibrio harveyi

Methanethiol (MeSH) and dimethyl sulfide (DMS) are important volatile organic sulfur compounds involved in atmospheric chemistry and climate regulation. However, little is known about the metabolism of these compounds in the ubiquitous marine vibrios. Here, we investigated MeSH/DMS production and whether these processes were regulated by quorum-sensing (QS) systems in Vibrio harveyi BB120. V. harveyi BB120 exhibited strong MeSH production from methionine (Met) (465 nmol mg total protein-1) and weak DMS production from dimethylsulfoniopropionate (DMSP) cleavage. The homologs of MegL responsible for MeSH production from L-Met widely existed in vibrio genomes. Using BB120 and its nine QS mutants, we found that the MeSH production was regulated by HAI-1, AI-2 and CAI-1 QS pathways, as well as the luxO gene located in the center of this QS cascade. The regulation role of HAI-1 and AI-2 QS systems in MeSH production was further confirmed by applying quorum-quenching enzyme MomL and exogenous autoinducer AI-2. By contrast, the DMS production from DMSP cleavage showed no significant difference between BB120 and its QS mutants. Such QS-regulated MeSH production may help to remove excess Met that can be harmful for vibrio growth. These results emphasize the importance of QS systems and the MeSH production process in vibrios.