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Mancini AN, Chandrashekar A, Lahitsara JP, Ogbeta DG, Rajaonarivelo JA, Ranaivorazo NR, Rasoazanakolona J, Safwat M, Solo J, Razafindraibe JG, Razafindrakoto G, Baden AL. Terrain Ruggedness and Canopy Height Predict Short-Range Dispersal in the Critically Endangered Black-and-White Ruffed Lemur. Genes (Basel) 2023; 14:746. [PMID: 36981017 PMCID: PMC10048730 DOI: 10.3390/genes14030746] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/01/2023] [Revised: 03/06/2023] [Accepted: 03/09/2023] [Indexed: 03/30/2023] Open
Abstract
Dispersal is a fundamental aspect of primates' lives and influences both population and community structuring, as well as species evolution. Primates disperse within an environmental context, where both local and intervening environmental factors affect all phases of dispersal. To date, research has primarily focused on how the intervening landscape influences primate dispersal, with few assessing the effects of local habitat characteristics. Here, we use a landscape genetics approach to examine between- and within-site environmental drivers of short-range black-and-white ruffed lemur (Varecia variegata) dispersal in the Ranomafana region of southeastern Madagascar. We identified the most influential drivers of short-range ruffed lemur dispersal as being between-site terrain ruggedness and canopy height, more so than any within-site habitat characteristic evaluated. Our results suggest that ruffed lemurs disperse through the least rugged terrain that enables them to remain within their preferred tall-canopied forest habitat. Furthermore, we noted a scale-dependent environmental effect when comparing our results to earlier landscape characteristics identified as driving long-range ruffed lemur dispersal. We found that forest structure drives short-range dispersal events, whereas forest presence facilitates long-range dispersal and multigenerational gene flow. Together, our findings highlight the importance of retaining high-quality forests and forest continuity to facilitate dispersal and maintain functional connectivity in ruffed lemurs.
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Affiliation(s)
- Amanda N. Mancini
- Department of Anthropology, The Graduate Center, City University of New York, New York, NY 10016, USA
- The New York Consortium in Evolutionary Primatology (NYCEP), New York, NY 10065, USA
| | - Aparna Chandrashekar
- Department of Anthropology, The Graduate Center, City University of New York, New York, NY 10016, USA
- The New York Consortium in Evolutionary Primatology (NYCEP), New York, NY 10065, USA
| | | | - Daisy Gold Ogbeta
- Department of Nursing, Helene Fuld College of Nursing, New York, NY 10035, USA
- Department of Chemistry, Hunter College, New York, NY 10065, USA
| | - Jeanne Arline Rajaonarivelo
- UMI 233 TransVIHMI, Institut de Recherche pour le Développement (IRD), University of Montpellier, Inserm U 1175, 34000 Montpellier, France
| | | | - Joseane Rasoazanakolona
- Department of Zoology and Animal Biodiversity, Faculty of Science, University of Antananarivo, Antananarivo 101, Madagascar
| | - Mayar Safwat
- Department of Chemistry, Hunter College, New York, NY 10065, USA
| | - Justin Solo
- Centre ValBio Research Center, Ranomafana, Ifanadiana 312, Madagascar (J.G.R.)
| | | | | | - Andrea L. Baden
- Department of Anthropology, The Graduate Center, City University of New York, New York, NY 10016, USA
- The New York Consortium in Evolutionary Primatology (NYCEP), New York, NY 10065, USA
- Department of Anthropology, Hunter College, New York, NY 10065, USA
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Painter LE, Weldy MJ, Crowhurst RS, Carraway LN, Epps CW. Landscape Genetics of the Camas Pocket Gopher (Thomomys bulbivorus), an Endemic Mammal of Oregon's Willamette Valley. WEST N AM NATURALIST 2022. [DOI: 10.3398/064.082.0305] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Luke E. Painter
- Department of Fisheries, Wildlife, and Conservation Sciences, Oregon State University, 104 Nash Hall, 2820 SW Campus Way, Corvallis, OR 97331
| | - Matthew J. Weldy
- Department of Fisheries, Wildlife, and Conservation Sciences, Oregon State University, 104 Nash Hall, 2820 SW Campus Way, Corvallis, OR 97331
| | - Rachel S. Crowhurst
- Department of Fisheries, Wildlife, and Conservation Sciences, Oregon State University, 104 Nash Hall, 2820 SW Campus Way, Corvallis, OR 97331
| | - Leslie N. Carraway
- Department of Fisheries, Wildlife, and Conservation Sciences, Oregon State University, 104 Nash Hall, 2820 SW Campus Way, Corvallis, OR 97331
| | - Clinton W. Epps
- Department of Fisheries, Wildlife, and Conservation Sciences, Oregon State University, 104 Nash Hall, 2820 SW Campus Way, Corvallis, OR 97331
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Landscape genetics of an endangered salt marsh endemic: Identifying population continuity and barriers to dispersal. CONSERV GENET 2022. [DOI: 10.1007/s10592-022-01446-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Abstract
AbstractPreserving the genetic diversity of endangered species is fundamental to their conservation and requires an understanding of genetic structure. In turn, identification of landscape features that impede gene flow can facilitate management to mitigate such obstacles and help with identifying isolated populations. We conducted a landscape genetic study of the endangered salt marsh harvest mouse (Reithrodontomys raviventris), a species endemic to the coastal marshes of the San Francisco Estuary of California. We collected and genotyped > 500 samples from across the marshes of Suisun Bay which contain the largest remaining tracts of habitat for the species. Cluster analyses and a population tree identified three geographically discrete populations. Next, we conducted landscape genetic analyses at two scales (the entire study area and across the Northern Marshes) where we tested 65 univariate models of landscape features and used the best supported to test multivariable analyses. Our analysis of the entire study area indicated that open water and elevation (> 2 m) constrained gene flow. Analysis of the Northern Marshes, where low elevation marsh habitat is more continuous, indicated that geographic distance was the only significant predictor of genetic distance at this scale. The identification of a large, connected population across Northern Marshes achieves a number of recovery targets for this stronghold of the species. The identification of landscape features that act as barriers to dispersal enables the identification of isolated and vulnerable populations more broadly across the species range, thus aiding conservation prioritization.
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Martin ME, Delheimer MS, Gabriel MW, Wengert GM, Moriarty KM. Combined field and clinical methods clarify mortality causes and survival patterns of Pacific martens. J Wildl Manage 2022. [DOI: 10.1002/jwmg.22131] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Marie E. Martin
- Oregon State University Institute for Natural Resources 2112 Southwest 5th Avenue Portland OR 97212 USA
| | - Matthew S. Delheimer
- USDA Forest Service Pacific Southwest Research Station 2480 Carson Road Placerville CA 95667 USA
| | - Mourad W. Gabriel
- Integral Ecology Research Center 239 Railroad Avenue Blue Lake CA 95525 USA
| | - Greta M. Wengert
- Integral Ecology Research Center 239 Railroad Avenue Blue Lake CA 95525 USA
| | - Katie M. Moriarty
- National Council for Air and Stream Improvement, Inc. 227 3rd StreetCorvallis OR 97330 USA
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Cancellare IA, Kierepka EM, Janecka J, Weckworth B, Kazmaier RT, Ward R. Multiscale patterns of isolation by ecology and fine-scale population structure in Texas bobcats. PeerJ 2021; 9:e11498. [PMID: 34141475 PMCID: PMC8180196 DOI: 10.7717/peerj.11498] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2020] [Accepted: 05/01/2021] [Indexed: 12/03/2022] Open
Abstract
Patterns of spatial genetic variation can be generated by a variety of ecological processes, including individual preferences based on habitat. These ecological processes act at multiple spatial and temporal scales, generating scale-dependent effects on gene flow. In this study, we focused on bobcats (Lynx rufus), a highly mobile, generalist felid that exhibits ecological and behavioral plasticity, high abundance, and broad connectivity across much of their range. However, bobcats also show genetic differentiation along habitat breaks, a pattern typically observed in cases of isolation-by-ecology (IBE). The IBE observed in bobcats is hypothesized to occur due to habitat-biased dispersal, but it is unknown if this occurs at other habitat breaks across their range or at what spatial scale IBE becomes most apparent. Thus, we used a multiscale approach to examine isolation by ecology (IBE) patterns in bobcats (Lynx rufus) at both fine and broad spatial scales in western Texas. We genotyped 102 individuals at nine microsatellite loci and used partial redundancy analysis (pRDA) to test if a suite of landscape variables influenced genetic variation in bobcats. Bobcats exhibited a latitudinal cline in population structure with a spatial signature of male-biased dispersal, and no clear barriers to gene flow. Our pRDA tests revealed high genetic similarity in similar habitats, and results differed by spatial scale. At the fine spatial scale, herbaceous rangeland was an important influence on gene flow whereas mixed rangeland and agriculture were significant at the broad spatial scale. Taken together, our results suggests that complex interactions between spatial-use behavior and landscape heterogeneity can create non-random gene flow in highly mobile species like bobcats. Furthermore, our results add to the growing body of data highlighting the importance of multiscale study designs when assessing spatial genetic structure.
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Affiliation(s)
- Imogene A Cancellare
- Department of Life, Earth, and Environmental Sciences, West Texas A&M University, Canyon, Texas, USA.,Department of Entomology and Wildlife Ecology, University of Delaware, Newark, DE, USA
| | - Elizabeth M Kierepka
- Department of Forestry and Environmental Resources, North Carolina Museum of Natural Sciences, Raleigh, North Carolina, USA
| | - Jan Janecka
- Department of Biological Sciences, Duquesne University, Pittsburgh, Pennsylvania, USA
| | | | - Richard T Kazmaier
- Department of Life, Earth, and Environmental Sciences, West Texas A&M University, Canyon, Texas, USA
| | - Rocky Ward
- Department of Life, Earth, and Environmental Sciences, West Texas A&M University, Canyon, Texas, USA
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