1
|
Dong X, Li W, Li C, Akan OD, Liao C, Cao J, Zhang L. Integrated transcriptomics and metabolomics revealed the mechanism of catechin biosynthesis in response to lead stress in tung tree (Vernicia fordii). THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 930:172796. [PMID: 38692325 DOI: 10.1016/j.scitotenv.2024.172796] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2024] [Revised: 04/24/2024] [Accepted: 04/24/2024] [Indexed: 05/03/2024]
Abstract
Lead (Pb) affects gene transcription, metabolite biosynthesis and growth in plants. The tung tree (Vernicia fordii) is highly adaptive to adversity, whereas the mechanisms underlying its response to Pb remain uncertain. In this work, transcriptomic and metabolomic analyses were employed to study tung trees under Pb stress. The results showed that the biomass of tung seedlings decreased with increasing Pb doses, and excessive Pb doses resulted in leaf wilting, root rot, and disruption of Pb homeostasis. Under non-excessive Pb stress, a significant change in the expression patterns of flavonoid biosynthesis genes was observed in the roots of tung seedlings, leading to changes in the accumulation of flavonoids in the roots, especially the upregulation of catechins, which can chelate Pb and reduce its toxicity in plants. In addition, Pb-stressed roots showed a large accumulation of VfWRKY55, VfWRKY75, and VfLRR1 transcripts, which were shown to be involved in the flavonoid biosynthesis pathway by gene module analysis. Overexpression of VfWRKY55, VfWRKY75, and VfLRR1 significantly increased catechin concentrations in tung roots, respectively. These data indicate that Pb stress-induced changes in the expression patterns of those genes regulate the accumulation of catechins. Our findings will help to clarify the molecular mechanism of Pb response in plants.
Collapse
Affiliation(s)
- Xiang Dong
- Key Laboratory of Cultivation and Protection for Non-wood Forest Trees, Ministry of Education, Central South University of Forestry and Technology, Changsha 410004, China
| | - Wenying Li
- Key Laboratory of Cultivation and Protection for Non-wood Forest Trees, Ministry of Education, Central South University of Forestry and Technology, Changsha 410004, China; College of Biology and Agricultural Resources, Huanggang Normal University, Huanggang, Hubei 438000, China
| | - Changzhu Li
- State Key Laboratory of Utilization of Woody Oil Resource, Hunan Academy of Forestry, Changsha 410004, China
| | - Otobong Donald Akan
- Key Laboratory of Cultivation and Protection for Non-wood Forest Trees, Ministry of Education, Central South University of Forestry and Technology, Changsha 410004, China; Faculty of Biological Science, Akwa-Ibom State University, Akwa-Ibom State, Uyo 1167, Nigeria
| | - Chancan Liao
- Key Laboratory of Cultivation and Protection for Non-wood Forest Trees, Ministry of Education, Central South University of Forestry and Technology, Changsha 410004, China
| | - Jie Cao
- Key Laboratory of Cultivation and Protection for Non-wood Forest Trees, Ministry of Education, Central South University of Forestry and Technology, Changsha 410004, China
| | - Lin Zhang
- Key Laboratory of Cultivation and Protection for Non-wood Forest Trees, Ministry of Education, Central South University of Forestry and Technology, Changsha 410004, China.
| |
Collapse
|
2
|
Dong QJ, Xu XY, Fan CX, Xiao JP. Transcriptome and metabolome analyses reveal chlorogenic acid accumulation in pigmented potatoes at different altitudes. Genomics 2024; 116:110883. [PMID: 38857813 DOI: 10.1016/j.ygeno.2024.110883] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2024] [Revised: 06/06/2024] [Accepted: 06/08/2024] [Indexed: 06/12/2024]
Abstract
Pigmented potato tubers are abundant in chlorogenic acids (CGAs), a metabolite with pharmacological activity. This article comprehensively analyzed the transcriptome and metabolome of pigmented potato Huaxingyangyu and Jianchuanhong at four altitudes of 1800 m, 2300 m, 2800 m, and 3300 m. A total of 20 CGAs and intermediate CGA compounds were identified, including 3-o-caffeoylquinic acid, 4-o-caffeoylquinic acid, and 5-o-caffeoylquinic acid. CGA contents in Huaxinyangyu and Jianchuanhong reached its maximum at an altitude of 2800 m and slightly decreased at 3300 m. 48 candidate genes related to the biosynthesis pathway of CGAs were screened through transcriptome analysis. Weighted gene co-expression network analysis (WGCNA) identified that the structural genes of phenylalanine deaminase (PAL), coumarate-3 hydroxylase (C3H), cinnamic acid 4-hydroxylase (C4H) and the transcription factors of MYB and bHLH co-regulate CGA biosynthesis. The results of this study provide valuable information to reveal the changes in CGA components in pigmented potato at different altitudes.
Collapse
Affiliation(s)
- Qiu-Ju Dong
- College of Agronomy and Biotechnology, Yunnan Agricultural University, No.95 Jinhei Road, Panlong District, Kunming City, Yunnan 650201, China
| | - Xiao-Yu Xu
- College of Agronomy and Biotechnology, Yunnan Agricultural University, No.95 Jinhei Road, Panlong District, Kunming City, Yunnan 650201, China
| | - Cai-Xia Fan
- College of Agronomy and Biotechnology, Yunnan Agricultural University, No.95 Jinhei Road, Panlong District, Kunming City, Yunnan 650201, China
| | - Ji-Ping Xiao
- College of Agronomy and Biotechnology, Yunnan Agricultural University, No.95 Jinhei Road, Panlong District, Kunming City, Yunnan 650201, China.
| |
Collapse
|
3
|
Luo Q, Chen P, Zong J, Gao J, Qin R, Wu C, Lv Q, Xu Y, Zhao T, Fu Y. Integrated transcriptomic and CGAs analysis revealed IbGLK1 is a key transcription factor for chlorogenic acid accumulation in sweetpotato (Ipomoea batatas [L.] Lam.) blades. Int J Biol Macromol 2024; 266:131045. [PMID: 38547942 DOI: 10.1016/j.ijbiomac.2024.131045] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2023] [Revised: 03/01/2024] [Accepted: 03/19/2024] [Indexed: 04/02/2024]
Abstract
Sweetpotato blades are rich in the functional secondary metabolite chlorogenic acid (CGA), which deepen potential for effective utilization of the blade in industry. In this study, we evaluated the type and content of CGA in the blades of 16 sweetpotato genotypes and analyzed the correlation between CGA content and antioxidant capacity. Then we isolated and characterized IbGLK1, a GARP-type transcription factor, by comparative transcriptome analysis. A subcellular localization assay indicated that IbGLK1 is located in the nucleus. Overexpression and silencing of IbGLK1 in sweetpotato blade resulted in a 0.90-fold increase and 1.84-fold decrease, respectively, in CGA content compared to the control. Yeast one-hybrid and dual-luciferase assays showed that IbGLK1 binds and activates the promoters of IbHCT, IbHQT, IbC4H, and IbUGCT, resulting in the promotion of CGA biosynthesis. In conclusion, our study provides insights into a high-quality gene for the regulation of CGA metabolism and germplasm resources for breeding sweetpotato.
Collapse
Affiliation(s)
- Qingqing Luo
- Engineering and Technology Research Center for Sweetpotato of Chongqing, School of Life Science, Southwest University, Chongqing 400715, PR China
| | - Peitao Chen
- Engineering and Technology Research Center for Sweetpotato of Chongqing, School of Life Science, Southwest University, Chongqing 400715, PR China
| | - Jikai Zong
- Engineering and Technology Research Center for Sweetpotato of Chongqing, School of Life Science, Southwest University, Chongqing 400715, PR China
| | - Jilong Gao
- Engineering and Technology Research Center for Sweetpotato of Chongqing, School of Life Science, Southwest University, Chongqing 400715, PR China
| | - Ruihua Qin
- Engineering and Technology Research Center for Sweetpotato of Chongqing, School of Life Science, Southwest University, Chongqing 400715, PR China
| | - Chunli Wu
- Engineering and Technology Research Center for Sweetpotato of Chongqing, School of Life Science, Southwest University, Chongqing 400715, PR China
| | - Qina Lv
- Engineering and Technology Research Center for Sweetpotato of Chongqing, School of Life Science, Southwest University, Chongqing 400715, PR China
| | - Yuanjiang Xu
- Chongqing Research Institute of Traditional Chinese Medicine, Chongqing 400065, PR China
| | - Tengfei Zhao
- Engineering and Technology Research Center for Sweetpotato of Chongqing, School of Life Science, Southwest University, Chongqing 400715, PR China
| | - Yufan Fu
- Engineering and Technology Research Center for Sweetpotato of Chongqing, School of Life Science, Southwest University, Chongqing 400715, PR China.
| |
Collapse
|
4
|
Liu S, Gao X, Shi M, Sun M, Li K, Cai Y, Chen C, Wang C, Maoz I, Guo X, Kai G. Jasmonic acid regulates the biosynthesis of medicinal metabolites via the JAZ9-MYB76 complex in Salvia miltiorrhiza. HORTICULTURE RESEARCH 2023; 10:uhad004. [PMID: 36938574 PMCID: PMC10022484 DOI: 10.1093/hr/uhad004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/03/2022] [Accepted: 01/03/2023] [Indexed: 06/18/2023]
Abstract
Jasmonic acid (JA) signaling pathway plays an important role in tanshinone and phenolic acid biosynthesis in Salvia miltiorrhiza. However, the specific regulatory mechanism remains largely unclear. Previous work showed that a JASMONATE ZIM-domain (JAZ) protein, SmJAZ9, acted as a repressor of tanshinone production in S. miltiorrhiza. In this study, we revealed that SmJAZ9 reduced both phenolic acid accumulation and related biosynthetic gene expression, confirming that SmJAZ9 also negatively affected phenolic acid biosynthesis. Then, we identified a novel MYB transcription factor, SmMYB76, which interacted with SmJAZ9. SmMYB76 repressed phenolic acid biosynthesis by directly downregulating SmPAL1, Sm4CL2, and SmRAS1. Further investigation demonstrated that JA mediated phenolic acids biosynthesis via SmJAZ9-SmMYB76 complex. Taken together, these findings state the molecular mechanism that SmJAZ9-SmMYB76 regulated phenolic acid biosynthesis at the transcriptional and protein levels, which provided new insights into JA signaling pathway regulating plant metabolism.
Collapse
Affiliation(s)
| | | | - Min Shi
- Laboratory of Medicinal Plant Biotechnology, School of Pharmaceutical Sciences, Jinhua Academy, Zhejiang Chinese Medical University, Hangzhou, Zhejiang 310053, China
| | - Meihong Sun
- Institute of Plant Biotechnology, School of Life Sciences, Shanghai Normal University, Shanghai 200234, China
| | - Kunlun Li
- Laboratory of Medicinal Plant Biotechnology, School of Pharmaceutical Sciences, Jinhua Academy, Zhejiang Chinese Medical University, Hangzhou, Zhejiang 310053, China
| | - Yan Cai
- Laboratory of Medicinal Plant Biotechnology, School of Pharmaceutical Sciences, Jinhua Academy, Zhejiang Chinese Medical University, Hangzhou, Zhejiang 310053, China
| | - Chengan Chen
- Laboratory of Medicinal Plant Biotechnology, School of Pharmaceutical Sciences, Jinhua Academy, Zhejiang Chinese Medical University, Hangzhou, Zhejiang 310053, China
| | - Can Wang
- Laboratory of Medicinal Plant Biotechnology, School of Pharmaceutical Sciences, Jinhua Academy, Zhejiang Chinese Medical University, Hangzhou, Zhejiang 310053, China
| | - Itay Maoz
- Department of Postharvest Science, ARO, The Volcani Center, HaMaccabim Rd 68, POB 15159, Rishon LeZion, 7528809, Israel
| | | | | |
Collapse
|
5
|
Liu T, Liao J, Shi M, Li L, Liu Q, Cui X, Ning W, Kai G. A jasmonate-responsive bHLH transcription factor TaMYC2 positively regulates triterpenes biosynthesis in Taraxacum antungense Kitag. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2023; 326:111506. [PMID: 36283577 DOI: 10.1016/j.plantsci.2022.111506] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/13/2022] [Revised: 09/18/2022] [Accepted: 10/19/2022] [Indexed: 06/16/2023]
Abstract
Dandelion is a well-known traditional medical herb, also used as functional food. Dandelion possesses many medical properties, such as anti-bacterial and antioxidant activity and contains a variety of triterpenes, such as α-amyrin, β-amyrin, taraxerol and taraxasterol. In this study, we found that triterpenes biosynthesis was promoted by methyl jasmonate (MeJA), while the transcriptional mechanism underlying triterpenes biosynthesis was rarely investigated. Here, a MeJA-induced bHLH transcription factor TaMYC2 was identified. The content of taraxasterol and taraxerol in dandelion was obviously enhanced in overexpression TaMYC2 transgenic lines and expression level of the squalene synthase gene (TaSS) was elevated to about 3-5 folds compared with the control lines. Dual-LUC, Y1H and EMSA experiments revealed that TaMYC2 bound to the E-box motif in the promoter of TaSS and activated its transcription. Taken together, this study suggested that TaMYC2 acted as a positive regulator for bioengineering approaches to produce high content triterpenes-producing dandelions.
Collapse
Affiliation(s)
- Tingyao Liu
- College of Horticulture, Shenyang Agricultural University, Shenyang 110866, PR China
| | - Jingjing Liao
- Artemisinin Research Center, and Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing 100700, PR China
| | - Min Shi
- Laboratory for Core Technology of TCM Quality Improvement and Transformation, School of Pharmaceutical Sciences, The Third Affiliated Hospital, School of Pharmacy and Academy of Chinese Medical Science, Zhejiang Chinese Medical University, Hangzhou 311402, PR China
| | - Li Li
- College of Horticulture, Shenyang Agricultural University, Shenyang 110866, PR China
| | - Qun Liu
- Laboratory for Core Technology of TCM Quality Improvement and Transformation, School of Pharmaceutical Sciences, The Third Affiliated Hospital, School of Pharmacy and Academy of Chinese Medical Science, Zhejiang Chinese Medical University, Hangzhou 311402, PR China; Institute o f Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem.SunYat-Sen), Nanjing 210014, PR China
| | - Xin Cui
- College of Horticulture, Shenyang Agricultural University, Shenyang 110866, PR China
| | - Wei Ning
- College of Horticulture, Shenyang Agricultural University, Shenyang 110866, PR China.
| | - Guoyin Kai
- Laboratory for Core Technology of TCM Quality Improvement and Transformation, School of Pharmaceutical Sciences, The Third Affiliated Hospital, School of Pharmacy and Academy of Chinese Medical Science, Zhejiang Chinese Medical University, Hangzhou 311402, PR China.
| |
Collapse
|
6
|
Zhu Y, Gu W, Tian R, Li C, Ji Y, Li T, Wei C, Chen Z. Morphological, physiological, and secondary metabolic responses of Taraxacum officinale to salt stress. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2022; 189:71-82. [PMID: 36055055 DOI: 10.1016/j.plaphy.2022.08.002] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/27/2022] [Revised: 06/17/2022] [Accepted: 08/02/2022] [Indexed: 06/15/2023]
Abstract
Salt stress has a major effect on growth and secondary metabolism in medicinal plants, however, the effect of salt stress on Taraxacum officinale F. H. Wigg. is still scarce. In this study, we evaluated the effects of salt stress on the physiology, morphology, phenolic acid accumulation, and expression of genes involved in phenolic acid biosynthesis in T. officinale. We found that plants grew well at 1 g kg-1 NaCl, and the state of photosystem Ⅱ (PSⅡ) and the organization of the chloroplasts at 0.5 g kg-1 NaCl showed no significant differences compared with the control. However, 2 g kg-1 and 4 g kg-1 NaCl inhibited growth and accelerated leaf senescence. At 4 g kg-1 NaCl, the fresh and dry weights decreased to 28% and 42% of the control, while chlorosis and necrosis were observed on the leaves. Furthermore, up-regulation of the expression of ToC3'H corresponded with an increase in the levels of caffeoylquinic acids (chlorogenic acid and isochlorogenic acid A) at NaCl concentration ≤ 1 g kg-1. Expressions of four phenolic acid biosynthesis genes, ToC4H, To4CL, ToHCT, and ToHQT, were down-regulated with increasing NaCl concentrations, consistent with the observed decreases in caftaric and cichoric acids. In summary, cultivation of T. officinale under mild salt stress (NaCl ≤ 1 g kg-1) is feasible and facilitates the accumulation of caffeoylquinic acids; thus this species may be recommended for saline soils.
Collapse
Affiliation(s)
- Yu Zhu
- School of Medicine & Holistic Integrative Medicine, Nanjing University of Chinese Medicine, 138 Xianlin Avenue, Nanjing, 210023, China; School of Pharmacy, Nanjing University of Chinese Medicine, 138 Xianlin Avenue, Nanjing, 210023, China
| | - Wei Gu
- School of Pharmacy, Nanjing University of Chinese Medicine, 138 Xianlin Avenue, Nanjing, 210023, China; Jiangsu Collaborative Innovation Center of Chinese Medicinal Resources Industrialization, Nanjing University of Chinese Medicine, Nanjing, 210023, China.
| | - Rong Tian
- School of Pharmacy, Nanjing University of Chinese Medicine, 138 Xianlin Avenue, Nanjing, 210023, China
| | - Chao Li
- Chinese Medicine Research Institute, Jumpcan Pharmaceutical Group Co., Ltd, 8 Baotawan, Daqing West Road, Taixing, 25441, China
| | - Yuanyuan Ji
- School of Pharmacy, Nanjing University of Chinese Medicine, 138 Xianlin Avenue, Nanjing, 210023, China
| | - Tao Li
- School of Pharmacy, Nanjing University of Chinese Medicine, 138 Xianlin Avenue, Nanjing, 210023, China
| | - Chenbin Wei
- School of Pharmacy, Nanjing University of Chinese Medicine, 138 Xianlin Avenue, Nanjing, 210023, China
| | - Ziyun Chen
- School of Pharmacy, Nanjing University of Chinese Medicine, 138 Xianlin Avenue, Nanjing, 210023, China
| |
Collapse
|
7
|
Naoya Fukuda ME, Yoshida H, Kusano M. Effects of light quality, photoperiod, CO 2 concentration, and air temperature on chlorogenic acid and rutin accumulation in young lettuce plants. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2022; 186:290-298. [PMID: 35932653 DOI: 10.1016/j.plaphy.2022.07.010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/25/2022] [Revised: 06/08/2022] [Accepted: 07/09/2022] [Indexed: 06/15/2023]
Abstract
Environmental stimuli modulate plant metabolite accumulation, facilitating adaptation to stressful conditions. In this study, the effects of blue and red light, photoperiod, CO2 concentration, and air temperature on the chlorogenic acid (CGA) and rutin contents of lettuce (Lactuca sativa L.) were evaluated. Under continuous blue light and a high CO2 concentration (1000 ppm), the CGA level increased. The increased expression of phenylalanine ammonia-lyase (PAL) and activity of its product were correlated with high expression of cinnamate 4-hydroxylase (C4H) and coumarate 3-hydroxylase (C3H). Furthermore, changes in PAL activity altered the CGA content in lettuce exposed to the three environmental factors, blue light, continuous lighting and high CO2 concentration. In addition, the expression levels of genes related to flavonoid biosynthesis increased in accordance with the promotion of CGA accumulation by the environmental factors. Under continuous blue light, 400 ppm CO2 promoted rutin accumulation to a greater degree compared to 1000 ppm CO2, by downregulating DFR expression. Low air temperature induced CGA accumulation in lettuce grown under continuous blue light and 1000 ppm CO2. Therefore, light quality, photoperiod, CO2 concentration, and air temperature exert synergistic effects on the CGA and rutin contents of lettuce by modulating activity in the corresponding biosynthesis pathways.
Collapse
Affiliation(s)
- Mirai Endo Naoya Fukuda
- Graduate School of Life and Environmental Sciences, University of Tsukuba 1-1-1 Tennodai, Tsukuba, Ibaraki, 305-8572, Japan.
| | - Hideo Yoshida
- Graduate School of Life and Environmental Sciences, University of Tsukuba 1-1-1 Tennodai, Tsukuba, Ibaraki, 305-8572, Japan
| | - Miyako Kusano
- Graduate School of Life and Environmental Sciences, University of Tsukuba 1-1-1 Tennodai, Tsukuba, Ibaraki, 305-8572, Japan
| |
Collapse
|
8
|
Su Z, Jia H, Sun M, Cai Z, Shen Z, Zhao B, Li J, Ma R, Yu M, Yan J. Integrative analysis of the metabolome and transcriptome reveals the molecular mechanism of chlorogenic acid synthesis in peach fruit. Front Nutr 2022; 9:961626. [PMID: 35928835 PMCID: PMC9344011 DOI: 10.3389/fnut.2022.961626] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2022] [Accepted: 06/30/2022] [Indexed: 01/01/2023] Open
Abstract
As the most abundant phenolic acid in peach fruit, chlorogenic acid (CGA) is an important entry point for the development of natural dietary supplements and functional foods. However, the metabolic and regulation mechanisms underlying its accumulation in peach fruits remain unclear. In this study, we evaluated the composition and content of CGAs in mature fruits of 205 peach cultivars. In peach fruits, three forms of CGA (52.57%), neochlorogenic acid (NCGA, 47.13%), and cryptochlorogenic acid (CCGA, 0.30%) were identified. During the growth and development of peach fruits, the content of CGAs generally showed a trend of rising first and then decreasing. Notably, the contents of quinic acid, shikimic acid, p-coumaroyl quinic acid, and caffeoyl shikimic acid all showed similar dynamic patterns to that of CGA, which might provide the precursor material basis for the accumulation of CGA in the later stage. Moreover, CGA, lignin, and anthocyanins might have a certain correlation and these compounds work together to maintain a dynamic balance. By the comparative transcriptome analysis, 8 structural genes (Pp4CL, PpCYP98A, and PpHCT) and 15 regulatory genes (PpMYB, PpWRKY, PpERF, PpbHLH, and PpWD40) were initially screened as candidate genes of CGA biosynthesis. Our findings preliminarily analyzed the metabolic and molecular regulation mechanisms of CGA biosynthesis in peach fruit, which provided a theoretical basis for developing high-CGA content peaches in future breeding programs.
Collapse
Affiliation(s)
- Ziwen Su
- Institute of Pomology, Jiangsu Academy of Agricultural Sciences, Jiangsu Key Laboratory for Horticultural Crop Genetic Improvement, Nanjing, China
- College of Horticulture, Nanjing Agricultural University, Nanjing, China
| | - Haoran Jia
- College of Horticulture, Nanjing Agricultural University, Nanjing, China
- College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China
| | - Meng Sun
- Institute of Pomology, Jiangsu Academy of Agricultural Sciences, Jiangsu Key Laboratory for Horticultural Crop Genetic Improvement, Nanjing, China
| | - Zhixiang Cai
- Institute of Pomology, Jiangsu Academy of Agricultural Sciences, Jiangsu Key Laboratory for Horticultural Crop Genetic Improvement, Nanjing, China
| | - Zhijun Shen
- Institute of Pomology, Jiangsu Academy of Agricultural Sciences, Jiangsu Key Laboratory for Horticultural Crop Genetic Improvement, Nanjing, China
| | - Bintao Zhao
- Institute of Pomology, Jiangsu Academy of Agricultural Sciences, Jiangsu Key Laboratory for Horticultural Crop Genetic Improvement, Nanjing, China
- College of Horticulture, Nanjing Agricultural University, Nanjing, China
| | - Jiyao Li
- Institute of Pomology, Jiangsu Academy of Agricultural Sciences, Jiangsu Key Laboratory for Horticultural Crop Genetic Improvement, Nanjing, China
- College of Horticulture, Nanjing Agricultural University, Nanjing, China
| | - Ruijuan Ma
- Institute of Pomology, Jiangsu Academy of Agricultural Sciences, Jiangsu Key Laboratory for Horticultural Crop Genetic Improvement, Nanjing, China
| | - Mingliang Yu
- Institute of Pomology, Jiangsu Academy of Agricultural Sciences, Jiangsu Key Laboratory for Horticultural Crop Genetic Improvement, Nanjing, China
- College of Horticulture, Nanjing Agricultural University, Nanjing, China
| | - Juan Yan
- Institute of Pomology, Jiangsu Academy of Agricultural Sciences, Jiangsu Key Laboratory for Horticultural Crop Genetic Improvement, Nanjing, China
- *Correspondence: Juan Yan,
| |
Collapse
|
9
|
Shen G, Wu R, Xia Y, Pang Y. Identification of Transcription Factor Genes and Functional Characterization of PlMYB1 From Pueraria lobata. FRONTIERS IN PLANT SCIENCE 2021; 12:743518. [PMID: 34691120 PMCID: PMC8531098 DOI: 10.3389/fpls.2021.743518] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2021] [Accepted: 09/13/2021] [Indexed: 05/10/2023]
Abstract
Kudzu, Pueraria lobata, is a traditional Chinese food and medicinal herb that has been commonly used since ancient times. Kudzu roots are rich sources of isoflavonoids, e.g., puerarin, with beneficial effects on human health. To gain global information on the isoflavonoid biosynthetic regulation network in kudzu, de novo transcriptome sequencings were performed using two genotypes of kudzu with and without puerarin accumulation in roots. RNAseq data showed that the genes of the isoflavonoid biosynthetic pathway were significantly represented in the upregulated genes in the kudzu with puerarin. To discover regulatory genes, 105, 112, and 143 genes encoding MYB, bHLH, and WD40 transcription regulators were identified and classified, respectively. Among them, three MYB, four bHLHs, and one WD40 gene were found to be highly identical to their orthologs involved in flavonoid biosynthesis in other plants. Notably, the expression profiles of PlMYB1, PlHLH3-4, and PlWD40-1 genes were closely correlated with isoflavonoid accumulation profiles in different tissues and cell cultures of kudzu. Over-expression of PlMYB1 in Arabidopsis thaliana significantly increased the accumulation of anthocyanins in leaves and proanthocyanidins in seeds, by activating AtDFR, AtANR, and AtANS genes. Our study provided valuable comparative transcriptome information for further identification of regulatory or structural genes involved in the isoflavonoid pathway in P. lobata, as well as for bioengineering of bioactive isoflavonoid compounds.
Collapse
Affiliation(s)
- Guoan Shen
- The Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences, Peking Union Medical College, Beijing, China
| | - Ranran Wu
- Key Laboratory of Plant Resources/Beijing Botanical Garden, Institute of Botany, Chinese Academy of Sciences, Beijing, China
| | - Yaying Xia
- Key Laboratory of Plant Resources/Beijing Botanical Garden, Institute of Botany, Chinese Academy of Sciences, Beijing, China
- Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Yongzhen Pang
- Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, China
- *Correspondence: Yongzhen Pang,
| |
Collapse
|