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For: Bertorelle G, Raffini F, Bosse M, Bortoluzzi C, Iannucci A, Trucchi E, Morales HE, van Oosterhout C. Genetic load: genomic estimates and applications in non-model animals. Nat Rev Genet 2022. [PMID: 35136196 DOI: 10.1038/s41576-022-00448-x] [Citation(s) in RCA: 80] [Impact Index Per Article: 40.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 01/10/2022] [Indexed: 12/11/2022]
Number Cited by Other Article(s)
1
Kardos M, Keller LF, Funk WC. What Can Genome Sequence Data Reveal About Population Viability? Mol Ecol 2024:e17608. [PMID: 39681836 DOI: 10.1111/mec.17608] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2024] [Revised: 11/08/2024] [Accepted: 11/26/2024] [Indexed: 12/18/2024]
2
Hoffman JI, Vendrami DLJ, Hench K, Chen RS, Stoffel MA, Kardos M, Amos W, Kalinowski J, Rickert D, Köhrer K, Wachtmeister T, Goebel ME, Bonin CA, Gulland FMD, Dasmahapatra KK. Genomic and fitness consequences of a near-extinction event in the northern elephant seal. Nat Ecol Evol 2024;8:2309-2324. [PMID: 39333394 PMCID: PMC11618080 DOI: 10.1038/s41559-024-02533-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2024] [Accepted: 08/07/2024] [Indexed: 09/29/2024]
3
Fang B, Edwards SV. Fitness consequences of structural variation inferred from a House Finch pangenome. Proc Natl Acad Sci U S A 2024;121:e2409943121. [PMID: 39531493 PMCID: PMC11588099 DOI: 10.1073/pnas.2409943121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2024] [Accepted: 10/03/2024] [Indexed: 11/16/2024]  Open
4
Yi H, Wang J, Dong S, Kang M. Genomic signatures of inbreeding and mutation load in tree ferns. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2024;120:1522-1535. [PMID: 39387366 DOI: 10.1111/tpj.17064] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/28/2024] [Revised: 09/11/2024] [Accepted: 09/23/2024] [Indexed: 10/15/2024]
5
Garcia-Erill G, Wang X, Rasmussen MS, Quinn L, Khan A, Bertola LD, Santander CG, Balboa RF, Ogutu JO, Pečnerová P, Hanghøj K, Kuja J, Nursyifa C, Masembe C, Muwanika V, Bibi F, Moltke I, Siegismund HR, Albrechtsen A, Heller R. Extensive Population Structure Highlights an Apparent Paradox of Stasis in the Impala (Aepyceros melampus). Mol Ecol 2024;33:e17539. [PMID: 39373069 DOI: 10.1111/mec.17539] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2024] [Revised: 08/30/2024] [Accepted: 09/18/2024] [Indexed: 10/08/2024]
6
Martin EJ, Speak SA, Urban L, Morales HE, van Oosterhout C. Sonification of Genomic Data to Represent Genetic Load in Zoo Populations. Zoo Biol 2024;43:513-519. [PMID: 39228291 PMCID: PMC11624621 DOI: 10.1002/zoo.21859] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2023] [Revised: 06/13/2024] [Accepted: 08/14/2024] [Indexed: 09/05/2024]
7
Zhu X, Wang J, Chen H, Kang M. Lineage Differentiation and Genomic Vulnerability in a Relict Tree From Subtropical Forests. Evol Appl 2024;17:e70033. [PMID: 39494192 PMCID: PMC11530410 DOI: 10.1111/eva.70033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2024] [Revised: 10/09/2024] [Accepted: 10/11/2024] [Indexed: 11/05/2024]  Open
8
Feng J, Dan X, Cui Y, Gong Y, Peng M, Sang Y, Ingvarsson PK, Wang J. Integrating evolutionary genomics of forest trees to inform future tree breeding amid rapid climate change. PLANT COMMUNICATIONS 2024;5:101044. [PMID: 39095989 PMCID: PMC11573912 DOI: 10.1016/j.xplc.2024.101044] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/12/2024] [Revised: 06/03/2024] [Accepted: 07/31/2024] [Indexed: 08/04/2024]
9
Ho TAT, Downing PA, Schou MF, Bechsgaard J, Thomsen PF, Jorgensen TH, Bilde T. The relationship between neutral genetic diversity and performance in wild arthropod populations. J Evol Biol 2024;37:1170-1180. [PMID: 39119920 DOI: 10.1093/jeb/voae099] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2024] [Revised: 06/14/2024] [Accepted: 08/05/2024] [Indexed: 08/10/2024]
10
Zhang L, Leonard N, Passaro R, Luan MS, Van Tuyen P, Han LTN, Cam NH, Vogelnest L, Lynch M, Fine AE, Nga NTT, Van Long N, Rawson BM, Behie A, Van Nguyen T, Le MD, Nadler T, Walter L, Marques-Bonet T, Hofreiter M, Li M, Liu Z, Roos C. Genomic adaptation to small population size and saltwater consumption in the critically endangered Cat Ba langur. Nat Commun 2024;15:8531. [PMID: 39358348 PMCID: PMC11447269 DOI: 10.1038/s41467-024-52811-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2023] [Accepted: 09/23/2024] [Indexed: 10/04/2024]  Open
11
Jensen EL, Gray R, Miller JM. Leveraging genomic load estimates to optimize captive breeding programmes. Mol Ecol Resour 2024;24:e14007. [PMID: 39139031 DOI: 10.1111/1755-0998.14007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2024] [Revised: 07/05/2024] [Accepted: 08/06/2024] [Indexed: 08/15/2024]
12
Telizhenko V, Kosiol C, McGowen MR, Gol'din P. Relaxed selection in evolution of genes regulating limb development gives clue to variation in forelimb morphology of cetaceans and other mammals. Proc Biol Sci 2024;291:20241106. [PMID: 39378996 PMCID: PMC11606503 DOI: 10.1098/rspb.2024.1106] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2024] [Revised: 07/29/2024] [Accepted: 09/02/2024] [Indexed: 10/10/2024]  Open
13
Armstrong EE, Mooney JA, Solari KA, Kim BY, Barsh GS, Grant VB, Greenbaum G, Kaelin CB, Panchenko K, Pickrell JK, Rosenberg N, Ryder OA, Yokoyama T, Ramakrishnan U, Petrov DA, Hadly EA. Unraveling the genomic diversity and admixture history of captive tigers in the United States. Proc Natl Acad Sci U S A 2024;121:e2402924121. [PMID: 39298482 PMCID: PMC11441546 DOI: 10.1073/pnas.2402924121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2024] [Accepted: 08/09/2024] [Indexed: 09/21/2024]  Open
14
Quinn CB, Preckler-Quisquater S, Buchalski MR, Sacks BN. Whole Genomes Inform Genetic Rescue Strategy for Montane Red Foxes in North America. Mol Biol Evol 2024;41:msae193. [PMID: 39288165 PMCID: PMC11424165 DOI: 10.1093/molbev/msae193] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2024] [Revised: 08/07/2024] [Accepted: 09/03/2024] [Indexed: 09/19/2024]  Open
15
Lan T, Yang S, Li H, Zhang Y, Li R, Sahu SK, Deng W, Liu B, Shi M, Wang S, Du H, Huang X, Lu H, Liu S, Deng T, Chen J, Wang Q, Han L, Zhou Y, Li Q, Li D, Kristiansen K, Wan QH, Liu H, Fang SG. Large-scale genome sequencing of giant pandas improves the understanding of population structure and future conservation initiatives. Proc Natl Acad Sci U S A 2024;121:e2406343121. [PMID: 39186654 PMCID: PMC11388402 DOI: 10.1073/pnas.2406343121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2024] [Accepted: 07/23/2024] [Indexed: 08/28/2024]  Open
16
Kou YX, Liu ML, López-Pujol J, Zhang QJ, Zhang ZY, Li ZH. Contrasting demographic history and mutational load in three threatened whitebark pines (Pinus subsect. Gerardianae): implications for conservation. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2024;119:2967-2981. [PMID: 39115017 DOI: 10.1111/tpj.16965] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2024] [Revised: 07/12/2024] [Accepted: 07/25/2024] [Indexed: 11/15/2024]
17
Lovinskaya A, Shalakhmetova T, Kolumbayeva S. Study of the cyto- and genotoxic activity of water from the Kapshagai reservoir (Kazakhstan) on laboratory mice. ENVIRONMENTAL TOXICOLOGY AND PHARMACOLOGY 2024;110:104522. [PMID: 39074520 DOI: 10.1016/j.etap.2024.104522] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2024] [Revised: 07/15/2024] [Accepted: 07/26/2024] [Indexed: 07/31/2024]
18
Kyriazis CC, Lohmueller KE. Constraining models of dominance for nonsynonymous mutations in the human genome. PLoS Genet 2024;20:e1011198. [PMID: 39302992 PMCID: PMC11446423 DOI: 10.1371/journal.pgen.1011198] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2024] [Revised: 10/02/2024] [Accepted: 09/04/2024] [Indexed: 09/22/2024]  Open
19
Chen Y, Dong L, Yi H, Kidner C, Kang M. Genomic divergence and mutation load in the Begonia masoniana complex from limestone karsts. PLANT DIVERSITY 2024;46:575-584. [PMID: 39290887 PMCID: PMC11403149 DOI: 10.1016/j.pld.2024.04.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/17/2023] [Revised: 04/01/2024] [Accepted: 04/03/2024] [Indexed: 09/19/2024]
20
Dehasque M, Morales HE, Díez-Del-Molino D, Pečnerová P, Chacón-Duque JC, Kanellidou F, Muller H, Plotnikov V, Protopopov A, Tikhonov A, Nikolskiy P, Danilov GK, Giannì M, van der Sluis L, Higham T, Heintzman PD, Oskolkov N, Gilbert MTP, Götherström A, van der Valk T, Vartanyan S, Dalén L. Temporal dynamics of woolly mammoth genome erosion prior to extinction. Cell 2024;187:3531-3540.e13. [PMID: 38942016 DOI: 10.1016/j.cell.2024.05.033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2023] [Revised: 02/08/2024] [Accepted: 05/17/2024] [Indexed: 06/30/2024]
21
Fava S, Sollitto M, Racaku M, Iannucci A, Benazzo A, Ancona L, Gratton P, Florian F, Pallavicini A, Ciofi C, Cesaroni D, Gerdol M, Sbordoni V, Bertorelle G, Trucchi E. Chromosome-Level Reference Genome of the Ponza Grayling (Hipparchia sbordonii), an Italian Endemic and Endangered Butterfly. Genome Biol Evol 2024;16:evae136. [PMID: 39023104 PMCID: PMC11255612 DOI: 10.1093/gbe/evae136] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 06/13/2024] [Indexed: 07/20/2024]  Open
22
Steux C, Szpiech ZA. The Maintenance of Deleterious Variation in Wild Chinese Rhesus Macaques. Genome Biol Evol 2024;16:evae115. [PMID: 38795368 PMCID: PMC11157460 DOI: 10.1093/gbe/evae115] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2023] [Revised: 04/25/2024] [Accepted: 05/22/2024] [Indexed: 05/27/2024]  Open
23
Wang Y, Yang Y, Han Z, Li J, Luo J, Yang H, Kuang J, Wu D, Wang S, Tso S, Ju T, Liu J, Renner SS, Kangshan M. Efficient purging of deleterious mutations contributes to the survival of a rare conifer. HORTICULTURE RESEARCH 2024;11:uhae108. [PMID: 38883334 PMCID: PMC11179848 DOI: 10.1093/hr/uhae108] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/30/2024] [Accepted: 04/01/2024] [Indexed: 06/18/2024]
24
Goli RC, Chishi KG, Ganguly I, Singh S, Dixit S, Rathi P, Diwakar V, Sree C C, Limbalkar OM, Sukhija N, Kanaka K. Global and Local Ancestry and its Importance: A Review. Curr Genomics 2024;25:237-260. [PMID: 39156729 PMCID: PMC11327809 DOI: 10.2174/0113892029298909240426094055] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2024] [Revised: 03/02/2024] [Accepted: 03/11/2024] [Indexed: 08/20/2024]  Open
25
Atağ G, Kaptan D, Yüncü E, Başak Vural K, Mereu P, Pirastru M, Barbato M, Leoni GG, Güler MN, Er T, Eker E, Yazıcı TD, Kılıç MS, Altınışık NE, Çelik EA, Morell Miranda P, Dehasque M, Floridia V, Götherström A, Bilgin CC, Togan İ, Günther T, Özer F, Hadjisterkotis E, Somel M. Population Genomic History of the Endangered Anatolian and Cyprian Mouflons in Relation to Worldwide Wild, Feral, and Domestic Sheep Lineages. Genome Biol Evol 2024;16:evae090. [PMID: 38670119 PMCID: PMC11109821 DOI: 10.1093/gbe/evae090] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2024] [Revised: 04/09/2024] [Accepted: 04/22/2024] [Indexed: 04/28/2024]  Open
26
Al Hikmani H, van Oosterhout C, Birley T, Labisko J, Jackson HA, Spalton A, Tollington S, Groombridge JJ. Can genetic rescue help save Arabia's last big cat? Evol Appl 2024;17:e13701. [PMID: 38784837 PMCID: PMC11113348 DOI: 10.1111/eva.13701] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2023] [Revised: 04/01/2024] [Accepted: 04/10/2024] [Indexed: 05/25/2024]  Open
27
Ewart KM, Ho SYW, Chowdhury AA, Jaya FR, Kinjo Y, Bennett J, Bourguignon T, Rose HA, Lo N. Pervasive relaxed selection in termite genomes. Proc Biol Sci 2024;291:20232439. [PMID: 38772424 DOI: 10.1098/rspb.2023.2439] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2023] [Accepted: 05/02/2024] [Indexed: 05/23/2024]  Open
28
Steux C, Szpiech ZA. The Maintenance of Deleterious Variation in Wild Chinese Rhesus Macaques. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.10.04.560901. [PMID: 38712222 PMCID: PMC11071285 DOI: 10.1101/2023.10.04.560901] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2024]
29
Gomes-Dos-Santos A, Fonseca E, Riccardi N, Hinzmann M, Lopes-Lima M, Froufe E. The transcriptome assembly of the European freshwater mussel Unio elongatulus C. Pfeiffer, 1825. Sci Data 2024;11:377. [PMID: 38609426 PMCID: PMC11014934 DOI: 10.1038/s41597-024-03226-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2023] [Accepted: 04/04/2024] [Indexed: 04/14/2024]  Open
30
Wilder AP, Steiner CC, Hendricks S, Haller BC, Kim C, Korody ML, Ryder OA. Genetic load and viability of a future restored northern white rhino population. Evol Appl 2024;17:e13683. [PMID: 38617823 PMCID: PMC11009427 DOI: 10.1111/eva.13683] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2023] [Revised: 03/04/2024] [Accepted: 03/06/2024] [Indexed: 04/16/2024]  Open
31
Jiang J, Xu YC, Zhang ZQ, Chen JF, Niu XM, Hou XH, Li XT, Wang L, Zhang YE, Ge S, Guo YL. Forces driving transposable element load variation during Arabidopsis range expansion. THE PLANT CELL 2024;36:840-862. [PMID: 38036296 PMCID: PMC10980350 DOI: 10.1093/plcell/koad296] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2023] [Revised: 10/25/2023] [Accepted: 11/06/2023] [Indexed: 12/02/2023]
32
Taylor RS, Manseau M, Keobouasone S, Liu P, Mastromonaco G, Solmundson K, Kelly A, Larter NC, Gamberg M, Schwantje H, Thacker C, Polfus J, Andrew L, Hervieux D, Simmons D, Wilson PJ. High genetic load without purging in caribou, a diverse species at risk. Curr Biol 2024;34:1234-1246.e7. [PMID: 38417444 DOI: 10.1016/j.cub.2024.02.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2023] [Revised: 11/17/2023] [Accepted: 02/01/2024] [Indexed: 03/01/2024]
33
Kyriazis CC, Lohmueller KE. Constraining models of dominance for nonsynonymous mutations in the human genome. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.02.25.582010. [PMID: 38463985 PMCID: PMC10925099 DOI: 10.1101/2024.02.25.582010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/12/2024]
34
Schmidt TL, Thia JA, Hoffmann AA. How Can Genomics Help or Hinder Wildlife Conservation? Annu Rev Anim Biosci 2024;12:45-68. [PMID: 37788416 DOI: 10.1146/annurev-animal-021022-051810] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/05/2023]
35
de Jong MJ, van Oosterhout C, Hoelzel AR, Janke A. Moderating the neutralist-selectionist debate: exactly which propositions are we debating, and which arguments are valid? Biol Rev Camb Philos Soc 2024;99:23-55. [PMID: 37621151 DOI: 10.1111/brv.13010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2022] [Revised: 08/04/2023] [Accepted: 08/07/2023] [Indexed: 08/26/2023]
36
Scott MF, Mackintosh C, Immler S. Gametic selection favours polyandry and selfing. PLoS Genet 2024;20:e1010660. [PMID: 38363804 PMCID: PMC10903963 DOI: 10.1371/journal.pgen.1010660] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2023] [Revised: 02/29/2024] [Accepted: 01/22/2024] [Indexed: 02/18/2024]  Open
37
Cole JB. Perspective: Can we actually do anything about inbreeding? J Dairy Sci 2024;107:643-648. [PMID: 37777000 DOI: 10.3168/jds.2023-23958] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2023] [Accepted: 09/07/2023] [Indexed: 10/02/2023]
38
Taylor RS, Manseau M, Wilson PJ. Delineating conservation units should be independent of effective population size. Trends Ecol Evol 2024;39:121-122. [PMID: 38065708 DOI: 10.1016/j.tree.2023.11.010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2023] [Revised: 11/21/2023] [Accepted: 11/22/2023] [Indexed: 02/09/2024]
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Yang S, Liu Y, Zhao X, Chen J, Li H, Liang H, Fan J, Zhou M, Wang S, Zhang X, Shi M, Han L, Yu M, Lu Y, Liu B, Xu Y, Lan T, Hou Z. Genomic exploration of the endangered oriental stork, Ciconia boyciana, sheds light on migration adaptation and future conservation. Gigascience 2024;13:giae081. [PMID: 39435574 PMCID: PMC11494145 DOI: 10.1093/gigascience/giae081] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2023] [Revised: 04/27/2024] [Accepted: 09/26/2024] [Indexed: 10/23/2024]  Open
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van Oosterhout C. AI-informed conservation genomics. Heredity (Edinb) 2024;132:1-4. [PMID: 38151537 PMCID: PMC10798949 DOI: 10.1038/s41437-023-00666-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2023] [Revised: 12/09/2023] [Accepted: 12/11/2023] [Indexed: 12/29/2023]  Open
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Pečnerová P, Lord E, Garcia-Erill G, Hanghøj K, Rasmussen MS, Meisner J, Liu X, van der Valk T, Santander CG, Quinn L, Lin L, Liu S, Carøe C, Dalerum F, Götherström A, Måsviken J, Vartanyan S, Raundrup K, Al-Chaer A, Rasmussen L, Hvilsom C, Heide-Jørgensen MP, Sinding MHS, Aastrup P, Van Coeverden de Groot PJ, Schmidt NM, Albrechtsen A, Dalén L, Heller R, Moltke I, Siegismund HR. Population genomics of the muskox' resilience in the near absence of genetic variation. Mol Ecol 2024;33:e17205. [PMID: 37971141 DOI: 10.1111/mec.17205] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2023] [Revised: 10/07/2023] [Accepted: 11/01/2023] [Indexed: 11/19/2023]
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Kardos M. Genomes of an endangered rattlesnake show that neutral genetic variation predicts adaptive genetic variation and genetic load. Proc Natl Acad Sci U S A 2023;120:e2316880120. [PMID: 38011578 PMCID: PMC10710039 DOI: 10.1073/pnas.2316880120] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2023]  Open
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Kyriazis CC, Robinson JA, Lohmueller KE. Using Computational Simulations to Model Deleterious Variation and Genetic Load in Natural Populations. Am Nat 2023;202:737-752. [PMID: 38033186 PMCID: PMC10897732 DOI: 10.1086/726736] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/02/2023]
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Maroso F, Padovani G, Muñoz Mora VH, Giannelli F, Trucchi E, Bertorelle G. Fitness consequences and ancestry loss in the Apennine brown bear after a simulated genetic rescue intervention. CONSERVATION BIOLOGY : THE JOURNAL OF THE SOCIETY FOR CONSERVATION BIOLOGY 2023;37:e14133. [PMID: 37259604 DOI: 10.1111/cobi.14133] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/2022] [Revised: 03/14/2023] [Accepted: 03/22/2023] [Indexed: 06/02/2023]
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Femerling G, van Oosterhout C, Feng S, Bristol RM, Zhang G, Groombridge J, P Gilbert MT, Morales HE. Genetic Load and Adaptive Potential of a Recovered Avian Species that Narrowly Avoided Extinction. Mol Biol Evol 2023;40:msad256. [PMID: 37995319 DOI: 10.1093/molbev/msad256] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2023] [Revised: 10/26/2023] [Accepted: 11/16/2023] [Indexed: 11/25/2023]  Open
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Mathur S, Mason AJ, Bradburd GS, Gibbs HL. Functional genomic diversity is correlated with neutral genomic diversity in populations of an endangered rattlesnake. Proc Natl Acad Sci U S A 2023;120:e2303043120. [PMID: 37844221 PMCID: PMC10614936 DOI: 10.1073/pnas.2303043120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2023] [Accepted: 09/19/2023] [Indexed: 10/18/2023]  Open
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Wang D, Salehian-Dehkordi H, Suo L, Lv F. Impacts of Population Size and Domestication Process on Genetic Diversity and Genetic Load in Genus Ovis. Genes (Basel) 2023;14:1977. [PMID: 37895326 PMCID: PMC10606048 DOI: 10.3390/genes14101977] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2023] [Revised: 10/19/2023] [Accepted: 10/20/2023] [Indexed: 10/29/2023]  Open
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Dussex N, Tørresen OK, van der Valk T, Le Moullec M, Veiberg V, Tooming-Klunderud A, Skage M, Garmann-Aarhus B, Wood J, Rasmussen JA, Pedersen ÅØ, Martin SL, Røed KH, Jakobsen KS, Dalén L, Hansen BB, Martin MD. Adaptation to the High-Arctic island environment despite long-term reduced genetic variation in Svalbard reindeer. iScience 2023;26:107811. [PMID: 37744038 PMCID: PMC10514459 DOI: 10.1016/j.isci.2023.107811] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2023] [Revised: 07/24/2023] [Accepted: 08/30/2023] [Indexed: 09/26/2023]  Open
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Dussex N, Kurland S, Olsen RA, Spong G, Ericsson G, Ekblom R, Ryman N, Dalén L, Laikre L. Range-wide and temporal genomic analyses reveal the consequences of near-extinction in Swedish moose. Commun Biol 2023;6:1035. [PMID: 37848497 PMCID: PMC10582009 DOI: 10.1038/s42003-023-05385-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2023] [Accepted: 09/25/2023] [Indexed: 10/19/2023]  Open
50
Guhlin J, Le Lec MF, Wold J, Koot E, Winter D, Biggs PJ, Galla SJ, Urban L, Foster Y, Cox MP, Digby A, Uddstrom LR, Eason D, Vercoe D, Davis T, Howard JT, Jarvis ED, Robertson FE, Robertson BC, Gemmell NJ, Steeves TE, Santure AW, Dearden PK. Species-wide genomics of kākāpō provides tools to accelerate recovery. Nat Ecol Evol 2023;7:1693-1705. [PMID: 37640765 DOI: 10.1038/s41559-023-02165-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2022] [Accepted: 07/11/2023] [Indexed: 08/31/2023]
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