X-ray diffraction tomography with limited projection information

Hybrid energy and angle dispersive X-ray diffraction computed tomography

Pixelated energy resolving detectors enable acquisition of X-ray diffraction (XRD) signals using a hybrid energy- and angle- dispersive technique, potentially paving the way for the development of novel benchtop XRD imaging or computed tomography (XRDCT) systems, utilising readily available polychromatic X-ray sources. In this work, a commercially available pixelated cadmium telluride (CdTe) detector, HEXITEC (High Energy X-ray Imaging Technology), was used to demonstrate such an XRDCT system. Specifically, a novel fly-scan technique was developed and compared to the established step-scan technique, reducing the total scan time by 42% while improving the spatial resolution, material contrast and therefore the material classification.

Depth resolved pencil beam radiography using AI - a proof of principle study

AIMS

Clinical radiographic imaging is seated upon the principle of differential keV photon transmission through an object. At clinical x-ray energies the scattering of photons causes signal noise and is utilized solely for transmission measurements. However, scatter - particularly Compton scatter, is characterizable. In this work we hypothesized that modern radiation sources and detectors paired with deep learning techniques can use scattered photon information constructively to resolve superimposed attenuators in planar x-ray imaging.

METHODS

We simulated a monoenergetic x-ray imaging system consisting of a pencil beam x-ray source directed at an imaging target positioned in front of a high spatial- and energy-resolution detector array. The setup maximizes information capture of transmitted photons by measuring off-axis scatter location and energy. The signal was analyzed by a convolutional neural network, and a description of scattering material along the axis of the beam was derived. The system was virtually designed/tested using Monte Carlo processing of simple phantoms consisting of 10 pseudo-randomly stacked air/bone/water materials, and the network was trained by solving a classification problem.

RESULTS

From our simulations we were able to resolve traversed material depth information to a high degree, within our simple imaging task. The average accuracy of the material identification along the beam was 0.91±0.01, with slightly higher accuracy towards the entrance/exit peripheral surfaces of the object. The average sensitivity and specificity was 0.91 and 0.95, respectively.

CONCLUSIONS

Our work provides proof of principle that deep learning techniques can be used to analyze scattered photon patterns which can constructively contribute to the information content in radiography, here used to infer depth information in a traditional 2D planar setup. This principle, and our results, demonstrate that the information in Compton scattered photons may provide a basis for further development. The work was limited by simple testing scenarios and without yet integrating complexities or optimizations. The ability to scale performance to the clinic remains unexplored and requires further study.

Three-dimensional tissue volume generation in conventional brightfield microscopy

The purpose of the study is to develop and automate a series of steps for enabling digital 3D tissue volume generation in conventional Brightfield microscopy for histopathology applications. Tissue samples were retrieved from the General Hospital of Athens "Hippocration", Greece. Samples were placed on a microtome that produced consecutive 2 μm sections. Each section was stained using Hematoxylin and Eosin and placed on microscope slides. A histopathologist specified the region of interest (ROI) on each slide. A 2D image was created from each ROI using a LEICA DM2500 microscope with a LEICA DFC 420C camera. Τhe 3D volume was created by stacking consecutive 2D images using a deep learning image interpolation method. The reconstructed 3D tissue volumes were evaluated by an expert histopathologist. Results showed that the 3D volumes might reveal information that is not clearly visible or even undetectable in the conventional 2D Brightfield images. In contrast to other 3D tissue imaging technologies, the proposed method (a) does not depend on the distance of the sample from the objectives producing 3D tissue volumes at any desired magnification, (b) does not require a special instrument, it may be implemented with any conventional Brightfield microscope, and (c) can be used for any given routine application, not only for some specialized clinical studies. The proposed study provides the basis for a feasible, cost-less and time-less upgrade of any standard 2D microscope into a 3D imaging instrument that may enhance the quality of diagnostic assessments in histopathology.

X-ray fan beam coded aperture transmission and diffraction imaging for fast material analysis

X-ray transmission imaging has been used in a variety of applications for high-resolution measurements based on shape and density. Similarly, X-ray diffraction (XRD) imaging has been used widely for molecular structure-based identification of materials. Combining these X-ray methods has the potential to provide high-resolution material identification, exceeding the capabilities of either modality alone. However, XRD imaging methods have been limited in application by their long measurement times and poor spatial resolution, which has generally precluded combined, rapid measurements of X-ray transmission and diffraction. In this work, we present a novel X-ray fan beam coded aperture transmission and diffraction imaging system, developed using commercially available components, for rapid and accurate non-destructive imaging of industrial and biomedical specimens. The imaging system uses a 160 kV Bremsstrahlung X-ray source while achieving a spatial resolution of ≈ 1 × 1 mm² and a spectral accuracy of > 95% with only 15 s exposures per 150 mm fan beam slice. Applications of this technology are reported in geological imaging, pharmaceutical inspection, and medical diagnosis. The performance of the imaging system indicates improved material differentiation relative to transmission imaging alone at scan times suitable for a variety of industrial and biomedical applications.

Combined X-ray diffraction and absorption tomography using a conical shell beam

We combine diffraction and absorption tomography by raster scanning samples through a hollow cone of pseudo monochromatic X-rays with a mean energy of 58.4 keV. A single image intensifier takes 90x90 (x,y) snapshots during the scan. We demonstrate a proof-of-principle of our technique using a heterogeneous three-dimensional (x,y,z) phantom (90x90x170 mm³) comprised of different material phases, i.e., copper and sodium chlorate. Each snapshot enables the simultaneous measurement of absorption contrast and diffracted flux. The axial resolution was ~1 mm along the (x,y) orthogonal scan directions and ~7 mm along the z-axis. The tomosynthesis of diffracted flux measurements enable the calculation of d-spacing values with ~0.1 Å full width at half maximum (FWHM) at ~2 Å. Thus the identified materials may be color-coded in the absorption optical sections. Characterization of specific material phases is of particular interest in security screening for the identification of narcotics and a wide range of homemade explosives concealed within complex "everyday objects." Other potential application areas include process control and biological imaging.

Confocal energy-dispersive X-ray diffraction tomography employing a conical shell beam

We introduce a new high-energy X-ray diffraction tomography technique for volumetric materials characterization. In this method, a conical shell beam is raster scanned through the samples. A central aperture optically couples the diffracted flux from the samples onto a pixelated energy-resolving detector. Snapshot measurements taken during the scan enable the construction of depth-resolved dark-field section images. The calculation of d-spacing values enables the mapping of material phase in a volumetric image. We demonstrate our technique using five ~15 mm thick, axially separated samples placed within a polymer tray of the type used routinely in airport security stations. Our method has broad analytical utility due to scalability in both scan size and X-ray energy. Additional application areas include medical diagnostics, materials science, and process control.

Development and assessment of a multi-beam continuous-phantom-motion x-ray scatter projection imaging system

X-ray image formation using scattered radiation can yield a superior contrast-to-noise ratio compared to conventional transmission x-ray imaging. A barrier to practical implementation of scatter imaging systems has been slow image acquisition. We have developed a projection imaging system which uses five monoenergetic pencil beams in combination with continuous phantom motion to achieve acquisition times that are practical for medical and security applications. The system was configured at the Canadian Light Source synchrotron and consists of a primary collimator, motorized stages for phantom translation, a flat-panel x-ray detector for measuring scattered x rays, and photodiodes for simultaneously measuring transmitted x rays. Image generation requires several corrections to raw data artifacts arising from the nature of the detector, x-ray source, and acquisition procedure. We developed a novel correction for pixel location inaccuracy arising from continuous phantom motion. A five-beam system had nearly five times faster acquisition than a single-beam system. Continuous motion acquisition was approximately 30 times faster than step-and-shoot acquisition. The total acquisition time for a 9 cm × 5 cm phantom with 8425 pixels was just over 2 min. Image quality was also assessed, in part to determine its relation to acquisition speed. The width of sharp material boundaries was found to be at a minimum equal to the pencil beam width (1.75 mm) and to have an additional width equal to the product of the phantom translation speed and the acquisition time per pixel (up to 1.0 mm in our experiments). Contrast-detail performance was independent of acquisition speed, depending only on phantom entrance x-ray fluence. Pixel signal-to-noise ratio measurements indicate that detector readout noise is important for the scatter data, even for phantom air kerma as high as 30 mGy. Images could be improved with a detector having lower readout noise and higher sensitivity. Its spatial resolution could be moderate. We confirmed that for the same range of λ^-1 sin(θ/2), where λ is the x-ray wavelength and θ is the scattering angle, scatter images acquired using different beam energies (33-70 keV) had nearly identical contrast.

Resolving 500 nm axial separation by multi-slice X-ray ptychography

Combining multi-slice ptychography with multi-modality scanning probe microscopy reconstructs two planes of nanostructures separated by 500 nm with sub-20 nm lateral resolution, assisted by simultaneously measured fluorescence maps for decoupling low-spatial-frequency features.

Multi-slice X-ray ptychography offers an approach to achieve images with a nanometre-scale resolution from samples with thicknesses larger than the depth of field of the imaging system by modeling a thick sample as a set of thin slices and accounting for the wavefront propagation effects within the specimen. Here, we present an experimental demonstration that resolves two layers of nanostructures separated by 500 nm along the axial direction, with sub-10 nm and sub-20 nm resolutions on two layers, respectively. Fluorescence maps are simultaneously measured in the multi-modality imaging scheme to assist in decoupling the mixture of low-spatial-frequency features across different slices. The enhanced axial sectioning capability using correlative signals obtained from multi-modality measurements demonstrates the great potential of the multi-slice ptychography method for investigating specimens with extended dimensions in 3D with high resolution.

Interior x-ray diffraction tomography with low-resolution exterior information

X-ray diffraction tomography (XDT) resolves spatially-variant XRD profiles within macroscopic objects, and provides improved material contrast compared to the conventional transmission-based computed tomography (CT). However, due to the small diffraction cross-section, XDT suffers from long imaging acquisition time, which could take tens of hours for a full scan using a table-top x-ray tube. In medical and industrial imaging applications, oftentimes only the XRD measurement within a region-of-interest (ROI) is required, which, together with the demand to reduce imaging time and radiation dose to the sample, motivates the development of interior XDT systems that scan and reconstruct only an internal region within the sample. The interior problem does not have a unique solution, and a direct inversion on the truncated projection data often leads to large reconstruction errors in ROI. To reduce the truncation artifacts, conventional attenuation-based interior reconstruction problems rely on a known region or piecewise constant constraint within the ROI. Here we propose a quasi-interior XDT scheme that incorporates a small fraction of projection information from the exterior region to assist ROI reconstruction. In the phantom simulation, a small amount (17% of exterior region) of added exterior projection data improves the reconstruction quality by ~50%. The addition of exterior samplings in the experiment demonstrates improved spatial and XRD profile reconstructions compared to total-variation-based reconstruction or sinogram extrapolation. We expect our quasi-interior XDT to obviate the requirement on prior knowledge of the object or its support, and to allow the ROI reconstruction to be performed with the fast, widely-used filtered back-projection algorithm for easy integration into real-time XDT imaging modules.

Dual conical shell illumination for volumetric high-energy X-ray diffraction imaging

To retrieve crystallographic information from extended sample volumes requires a high-energy probe.