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Piri Sahragard H, Karami P. Spatiotemporal analysis of seasonal trends in land surface temperature within the distribution range of Moringa peregrina (Forssk.) in Southern and Southeastern Iran. PLoS One 2024; 19:e0306642. [PMID: 39052565 PMCID: PMC11271878 DOI: 10.1371/journal.pone.0306642] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2024] [Accepted: 06/20/2024] [Indexed: 07/27/2024] Open
Abstract
Temperature fluctuations and related factors are among the main causes of climate change. Understanding the temporal and spatial variations in temperature can shed light on how species respond to climate change. Plants generally persist in suitable microclimates in response to environmental change; however, examining long-term temperature variations within a species' range can be challenging using field observations. Thermal remote sensing, on the other hand, provides multi-scale time-series data with good coverage and regularity to overcome the challenges associated with field observations in environmental monitoring. Although changes in land surface temperature (LST) affect climate, hydrological processes, land-atmosphere interactions, and ecological activities, this metric has not received much research attention. This study aimed to analyze changes in habitat suitability and microclimatic conditions for Moringa peregrina. Seasonal changes in LST within the distribution range of the species were also investigated. To this aim, mean seasonal LST was computed in Google Earth Engine using the daily MODIS/006/MYD13A2 product from 2003 to 2023. Subsequently, a binary habitat suitability map was created based on the true skill statistic (TSS). The Mann-Kendall test was used to analyze seasonal LST trends. Major trends in LST were quantified based on the z-score, and compatibility with habitat suitability was evaluated via GAP analysis and the Kappa index. Seasonal temperature trends were evaluated by comparing each season with the following season using binary comparison. Landforms at presence points were regarded as microclimates and the sensitivity of microclimates to LST was evaluated using two methods: Principal component analysis (PCA) was used to quantify seasonal LST heterogeneity and the random forest (RF) approach was used to evaluate the effect of environmental parameters on habitat suitability within microclimates. The Kappa index revealed a weak overlapping between suitable / unsuitable habitat and the surfaces affected by the trend of changes. Moreover, the suitable habitat of Moringa peregrina in spring, autumn and winter is spatially overlapped by areas that have shown an increasing LST trend, and the presence points have not experienced an increasing temperature trend only in the summer. The findings show that the analysis of seasonal trends in LST provides insights into the effect of LST on habitat suitability and the condition of vegetation. The current study clearly shows that seasonal changes have had a significant impact on the distribution and habitat suitability of M. peregrina, particularly during summer and winter. Improved habitat suitability and range expansion were observed throughout the year. The study also highlights the role of landforms in regulating temperature. Landforms such as local ridges with minimal temperature fluctuations and regions near the Oman Sea were identified as potential future habitats due to favorable humidity conditions.
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Affiliation(s)
- Hossein Piri Sahragard
- Department of Rangeland and Watershed Management, Faculty of Soil and Water, University of Zabol, Zabol, Iran
| | - Peyman Karami
- Department of Environmental Sciences, Faculty of Natural Resources and Environment Sciences, Malayer University, Malayer, Iran
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Faundes-Gandolfo N, Jara-Gutiérrez C, Párraga M, Montenegro I, Vera W, Escobar M, Madrid A, Valenzuela-Valderrama M, Villena J. Kalanchoe pinnata (Lam.) Pers. Leaf ethanolic extract exerts selective anticancer activity through ROS-induced apoptotic cell death in human cancer cell lines. BMC Complement Med Ther 2024; 24:269. [PMID: 39010075 PMCID: PMC11247786 DOI: 10.1186/s12906-024-04570-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2024] [Accepted: 06/26/2024] [Indexed: 07/17/2024] Open
Abstract
BACKGROUND The leaves of Kalanchoe pinnata (Lam.) Pers. (K. pinnata), a succulent plant native to tropical regions, are used as a medicinal alternative against cancer in several countries worldwide; however, its therapeutic potential to fight cancer has been little addressed. In this study, we analyzed the phytochemical content, antioxidant capacity, and selectivity of K. pinnata leaf ethanolic extract against different human cancer cell lines in vitro. METHODOLOGY This study subjected the ethanolic extract to enzymatic assays to quantify the phytochemical content (phenolics, flavonoids, and anthraquinones) and its radical scavenging and iron-reducing capacities. Also, the phytoconstituents and major phenolic compounds present in the extract's subfractions were identified by GC-MS, HPLC, and NMR. Human cancer (MCF-7, PC-3, HT-29) and normal colon (CoN) cell lines were treated with different concentrations of K. pinnata leaf ethanolic extract, and the changes in cell proliferation (sulforhodamine B assay), caspases activity (FITC-VAD-FMK reporter), mitochondrial membrane potential (MMP, rhodamine 123 assay), chromatin condensation/fragmentation (Hoechst 33342 stain), and ROS generation (DCFH2 probe assay) were assessed. RESULTS The results showed that the K. pinnata leaf ethanolic extract is rich in phytoconstituents with therapeutic potential, including phenols (quercetin and kaempferol), flavonoids, fatty acid esters (34.6% of the total composition), 1- triacontanol and sterols (ergosterol and stigmasterol, 15.4% of the total composition); however, it presents a poor content of antioxidant molecules (IC50 = 27.6 mg/mL for H2O2 scavenging activity vs. 2.86 mg/mL in the case of Trolox). Notably, the extract inhibited cell proliferation and reduced MMP in all human cell lines tested but showed selectivity for HT-29 colon cancer cells compared to CoN normal cells (SI = 8.4). Furthermore, ROS generation, caspase activity, and chromatin condensation/fragmentation were augmented significantly in cancer-derived cell lines, indicating a selective cytotoxic effect. CONCLUSION These findings reveal that the K. pinnata leaf ethanolic extract contains several bioactive molecules with therapeutic potential, capable of displaying selective cytotoxicity in different human cancer cell lines.
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Affiliation(s)
- Nicolas Faundes-Gandolfo
- Centro Interdisciplinario de Investigación Biomédica e Ingeniería para la Salud (MEDING), Escuela de Medicina, Facultad de Medicina, Universidad de Valparaíso, Valparaíso, Chile
| | - Carlos Jara-Gutiérrez
- Centro Interdisciplinario de Investigación Biomédica e Ingeniería para la Salud (MEDING), Escuela de Kinesiología, Facultad de Medicina, Universidad de Valparaíso, Valparaíso, Chile
| | - Mario Párraga
- Centro Interdisciplinario de Investigación Biomédica e Ingeniería para la Salud (MEDING), Escuela de Medicina, Facultad de Medicina, Universidad de Valparaíso, Valparaíso, Chile
| | - Iván Montenegro
- Centro Interdisciplinario de Investigación Biomédica e Ingeniería para la Salud (MEDING), Escuela de Obstetricia, Facultad de Medicina, Universidad de Valparaíso, Valparaíso, Chile
- Laboratorio de Química de Metabolitos Bioactivos, Escuela de Química y Farmacia, Facultad de Farmacia, Centro de Investigación Farmacopea Chilena, Universidad de Valparaíso, Escuela de Química y Farmacia, Universidad de Valparaíso, Valparaíso, Chile
| | - Waleska Vera
- Laboratorio de Química de Metabolitos Bioactivos, Escuela de Química y Farmacia, Facultad de Farmacia, Centro de Investigación Farmacopea Chilena, Universidad de Valparaíso, Escuela de Química y Farmacia, Universidad de Valparaíso, Valparaíso, Chile
| | - Marcela Escobar
- Laboratorio de Química de Metabolitos Bioactivos, Escuela de Química y Farmacia, Facultad de Farmacia, Centro de Investigación Farmacopea Chilena, Universidad de Valparaíso, Escuela de Química y Farmacia, Universidad de Valparaíso, Valparaíso, Chile
| | - Alejandro Madrid
- Laboratorio de Productos Naturales y Síntesis Orgánica, Departamento de Química, Facultad de Ciencias Naturales y Exactas, Universidad de Playa Ancha, Valparaíso, Chile
| | - Manuel Valenzuela-Valderrama
- Laboratorio de Microbiología Celular, Facultad de Medicina y Ciencias de la Salud, Universidad Central de Chile, Santiago, Chile.
| | - Joan Villena
- Centro Interdisciplinario de Investigación Biomédica e Ingeniería para la Salud (MEDING), Escuela de Medicina, Facultad de Medicina, Universidad de Valparaíso, Valparaíso, Chile.
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Chomthong M, Griffiths H. Prospects and perspectives: inferring physiological and regulatory targets for CAM from molecular and modelling approaches. ANNALS OF BOTANY 2023; 132:583-596. [PMID: 37742290 PMCID: PMC10799989 DOI: 10.1093/aob/mcad142] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/26/2023] [Revised: 08/26/2023] [Accepted: 09/21/2023] [Indexed: 09/26/2023]
Abstract
BACKGROUND AND SCOPE This review summarizes recent advances in our understanding of Crassulacean Acid Metabolism (CAM) by integrating evolutionary, ecological, physiological, metabolic and molecular perspectives. A number of key control loops which moderate the expression of CAM phases, and their metabolic and molecular control, are explored. These include nocturnal stomatal opening, activation of phosphoenolpyruvate carboxylase by a specific protein kinase, interactions with circadian clock control, as well as daytime decarboxylation and activation of Rubisco. The vacuolar storage and release of malic acid and the interplay between the supply and demand for carbohydrate reserves are also key metabolic control points. FUTURE OPPORTUNITIES We identify open questions and opportunities, with experimentation informed by top-down molecular modelling approaches allied with bottom-up mechanistic modelling systems. For example, mining transcriptomic datasets using high-speed systems approaches will help to identify targets for future genetic manipulation experiments to define the regulation of CAM (whether circadian or metabolic control). We emphasize that inferences arising from computational approaches or advanced nuclear sequencing techniques can identify potential genes and transcription factors as regulatory targets. However, these outputs then require systematic evaluation, using genetic manipulation in key model organisms over a developmental progression, combining gene silencing and metabolic flux analysis and modelling to define functionality across the CAM day-night cycle. From an evolutionary perspective, the origins and function of CAM succulents and responses to water deficits are set against the mesophyll and hydraulic limitations imposed by cell and tissue succulence in contrasting morphological lineages. We highlight the interplay between traits across shoots (3D vein density, mesophyll conductance and cell shrinkage) and roots (xylem embolism and segmentation). Thus, molecular, biophysical and biochemical processes help to curtail water losses and exploit rapid rehydration during restorative rain events. In the face of a changing climate, we hope such approaches will stimulate opportunities for future research.
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Affiliation(s)
- Methawi Chomthong
- Department of Plant Sciences, University of Cambridge, Cambridge, CB2 3EA, UK
| | - Howard Griffiths
- Department of Plant Sciences, University of Cambridge, Cambridge, CB2 3EA, UK
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Assis de Andrade E, Machinski I, Terso Ventura AC, Barr SA, Pereira AV, Beltrame FL, Strangman WK, Williamson RT. A Review of the Popular Uses, Anatomical, Chemical, and Biological Aspects of Kalanchoe (Crassulaceae): A Genus of Plants Known as "Miracle Leaf". Molecules 2023; 28:5574. [PMID: 37513446 PMCID: PMC10383218 DOI: 10.3390/molecules28145574] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2023] [Revised: 07/15/2023] [Accepted: 07/19/2023] [Indexed: 07/30/2023] Open
Abstract
Species of the genus Kalanchoe have a long history of therapeutic use in ethnomedicine linked to their remarkable healing properties. Several species have chemical and anatomical similarities, often leading to confusion when they are used in folk medicine. This review aims to provide an overview and discussion of the reported traditional uses, botanical aspects, chemical constituents, and pharmacological potential of the Kalanchoe species. Published scientific materials were collected from the PubMed and SciFinder databases without restriction regarding the year of publication through April 2023. Ethnopharmacological knowledge suggests that these species have been used to treat infections, inflammation, injuries, and other disorders. Typically, all parts of the plant are used for medicinal purposes either as crude extract or juice. Botanical evaluation can clarify species differentiation and can enable correct identification and validation of the scientific data. Flavonoids are the most common classes of secondary metabolites identified from Kalanchoe species and can be correlated with some biological studies (antioxidant, anti-inflammatory, and antimicrobial potential). This review summarizes several topics related to the Kalanchoe genus, supporting future studies regarding other unexplored research areas. The need to conduct further studies to confirm the popular uses and biological activities of bioactive compounds is also highlighted.
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Affiliation(s)
- Evelyn Assis de Andrade
- Pharmaceutical Science Graduate Program, State University of Ponta Grossa, Ponta Grossa 84030-900, PR, Brazil
| | - Isadora Machinski
- Pharmaceutical Science Graduate Program, State University of Ponta Grossa, Ponta Grossa 84030-900, PR, Brazil
| | - Ana Carolina Terso Ventura
- Pharmaceutical Science Graduate Program, State University of Ponta Grossa, Ponta Grossa 84030-900, PR, Brazil
| | - Sarah Ainslie Barr
- Department of Chemistry and Biochemistry, University of North Carolina Wilmington, Wilmington, NC 28409, USA
| | - Airton Vicente Pereira
- Pharmaceutical Science Graduate Program, State University of Ponta Grossa, Ponta Grossa 84030-900, PR, Brazil
| | - Flávio Luís Beltrame
- Pharmaceutical Science Graduate Program, State University of Ponta Grossa, Ponta Grossa 84030-900, PR, Brazil
| | - Wendy Karen Strangman
- Department of Chemistry and Biochemistry, University of North Carolina Wilmington, Wilmington, NC 28409, USA
| | - Robert Thomas Williamson
- Department of Chemistry and Biochemistry, University of North Carolina Wilmington, Wilmington, NC 28409, USA
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Leverett A, Hartzell S, Winter K, Garcia M, Aranda J, Virgo A, Smith A, Focht P, Rasmussen-Arda A, Willats WGT, Cowan-Turner D, Borland AM. Dissecting succulence: Crassulacean acid metabolism and hydraulic capacitance are independent adaptations in Clusia leaves. PLANT, CELL & ENVIRONMENT 2023; 46:1472-1488. [PMID: 36624682 DOI: 10.1111/pce.14539] [Citation(s) in RCA: 10] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/19/2022] [Revised: 01/05/2023] [Accepted: 01/08/2023] [Indexed: 06/17/2023]
Abstract
Succulence is found across the world as an adaptation to water-limited niches. The fleshy organs of succulent plants develop via enlarged photosynthetic chlorenchyma and/or achlorophyllous water storage hydrenchyma cells. The precise mechanism by which anatomical traits contribute to drought tolerance is unclear, as the effect of succulence is multifaceted. Large cells are believed to provide space for nocturnal storage of malic acid fixed by crassulacean acid metabolism (CAM), whilst also buffering water potentials by elevating hydraulic capacitance (CFT ). The effect of CAM and elevated CFT on growth and water conservation have not been compared, despite the assumption that these adaptations often occur together. We assessed the relationship between succulent anatomical adaptations, CAM, and CFT , across the genus Clusia. We also simulated the effects of CAM and CFT on growth and water conservation during drought using the Photo3 model. Within Clusia leaves, CAM and CFT are independent traits: CAM requires large palisade chlorenchyma cells, whereas hydrenchyma tissue governs interspecific differences in CFT . In addition, our model suggests that CAM supersedes CFT as a means to maximise CO2 assimilation and minimise transpiration during drought. Our study challenges the assumption that CAM and CFT are mutually dependent traits within succulent leaves.
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Affiliation(s)
- Alistair Leverett
- School of Natural and Environmental Sciences, Newcastle University, Newcastle Upon Tyne, UK
- Smithsonian Tropical Research Institute, Balboa, Ancón, Republic of Panama
| | - Samantha Hartzell
- Department of Civil and Environmental Engineering, Portland State University, Portland, Oregon, USA
| | - Klaus Winter
- Smithsonian Tropical Research Institute, Balboa, Ancón, Republic of Panama
| | - Milton Garcia
- Smithsonian Tropical Research Institute, Balboa, Ancón, Republic of Panama
| | - Jorge Aranda
- Smithsonian Tropical Research Institute, Balboa, Ancón, Republic of Panama
| | - Aurelio Virgo
- Smithsonian Tropical Research Institute, Balboa, Ancón, Republic of Panama
| | - Abigail Smith
- School of Natural and Environmental Sciences, Newcastle University, Newcastle Upon Tyne, UK
| | - Paulina Focht
- School of Natural and Environmental Sciences, Newcastle University, Newcastle Upon Tyne, UK
| | - Adam Rasmussen-Arda
- School of Natural and Environmental Sciences, Newcastle University, Newcastle Upon Tyne, UK
| | - William G T Willats
- School of Natural and Environmental Sciences, Newcastle University, Newcastle Upon Tyne, UK
| | - Daniel Cowan-Turner
- School of Natural and Environmental Sciences, Newcastle University, Newcastle Upon Tyne, UK
| | - Anne M Borland
- School of Natural and Environmental Sciences, Newcastle University, Newcastle Upon Tyne, UK
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Jia T, Qi Y, Zhao H, Xian X, Li J, Huang H, Yu W, Liu WX. Estimation of climate-induced increased risk of Centaurea solstitialis L. invasion in China: An integrated study based on biomod2. Front Ecol Evol 2023. [DOI: 10.3389/fevo.2023.1113474] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/24/2023] Open
Abstract
IntroductionInvasive alien plants (IAPs) are major hazards to biodiversity, human health, and the agricultural economy. As one of the most aggressive species of IAPs, the distribution area of Centaurea solstitialis L. has increased exponentially in the past two years since its invasion into Xinjiang, China, in July 2014. Predicting the potential geographic distributions (PGDs) of C. solstitialis in China can provide theoretical support for preventing the continued spread of this weed.MethodsIn this study, based on 5,969 valid occurrence records of C. solstitialis and 33 environmental variables, we constructed an ensemble model to predict suitable habitats for C. solstitialis under climate change scenarios.ResultsOur results showed that the mean true skill statistic (TSS) values, area under the receiver operating characteristic (ROC) curve (AUC), and Cohen’s Kappa (KAPPA) for the ensemble model were 0.954, 0.996, and 0.943, respectively. The ensemble model yielded more precise predictions than those of the single model. Temperature seasonality (Bio4), minimum temperature of the coldest month (Bio6), precipitation of the driest month (Bio14), and human influence index (HII) have significantly disrupted the PGDs of C. solstitialis in China. The total (high) suitability habitat area of C. solstitialis in China was 275.91 × 104 (67.78 × 104) km2, accounting for 71.26 (7.06)% of China. The PGDs of C. solstitialis in China under the current climate were mainly in East China (Shandong, Jiangsu, Shanghai, Zhejiang, and Anhui), Central China (Henan, southwestern Shanxi, southern Shaanxi, southern Gansu, Hubei, Hunan, Jiangxi, Chongqing, and Guizhou), and South China (southern Tibet, eastern Sichuan, Yunnan, Guangxi, Guangdong, Fujian, and Taiwan). Under future climate scenarios, the total suitability habitat area for C. solstitialis will expand, whereas the high suitability habitat area will decrease.DiscussionThe main manifestation is that the shift of southeast China into a moderate suitability habitat, and the total suitability habitats will be extended to northwest China. More focus needs to be placed on preventing further spread of C. solstitialis in northwest China.
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Huang R, Du H, Wen Y, Zhang C, Zhang M, Lu H, Wu C, Zhao B. Predicting the distribution of suitable habitat of the poisonous weed Astragalus variabilis in China under current and future climate conditions. FRONTIERS IN PLANT SCIENCE 2022; 13:921310. [PMID: 36204071 PMCID: PMC9531759 DOI: 10.3389/fpls.2022.921310] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/15/2022] [Accepted: 08/23/2022] [Indexed: 06/16/2023]
Abstract
Astragalus variabilis is a locoweed of northwest China that can seriously impede livestock development. However, it also plays various ecological roles, such as wind protection and sand fixation. Here, we used an optimized MaxEnt model to predict the distribution of suitable habitat of A. variabilis under current (1970-2000) conditions and future (2021-2080) climate change scenarios based on recent occurrence records. The most important environmental variables (suitability ranges in parentheses) affecting the distribution of A. variabilis were average maximum temperature of February (-2.12-5.34°C), followed by total precipitation of June (2.06-37.33 mm), and topsoil organic carbon (0.36-0.69%). The habitat suitability of A. variabilis was significantly correlated with the frequency of livestock poisoning (p < 0.05). Under current climate conditions, the suitable environment of A. variabilis was distributed in central and western Inner Mongolia, Ningxia, central and northwestern Gansu, central and northwestern Qinghai, and the four basins around the Tianshan Mountains in Xinjiang. Under future climate conditions, the suitable habitat of A. variabilis shifted to higher latitudes and altitudes. No previous studies have used niche models to predict the suitable environment of this species nor analyzed the relationship between the habitat suitability of poisonous plants and the frequency of animal poisoning. Our findings provide new insights that will aid the prevention of livestock animal poisoning and the control of poisonous plants, promote the development of the livestock husbandry industry, and provide basic information that will facilitate the maintenance of the ecological balance of grassland ecosystems.
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Affiliation(s)
- Ruijie Huang
- College of Veterinary Medicine, Northwest A&F University, Yangling, China
- Institute of Poisonous Plants in Western China, Northwest A&F University, Yangling, China
| | - Huimin Du
- College of Veterinary Medicine, Northwest A&F University, Yangling, China
- Institute of Poisonous Plants in Western China, Northwest A&F University, Yangling, China
| | - Yuting Wen
- College of Veterinary Medicine, Northwest A&F University, Yangling, China
- Institute of Poisonous Plants in Western China, Northwest A&F University, Yangling, China
| | - Chunyan Zhang
- College of Veterinary Medicine, Northwest A&F University, Yangling, China
- Institute of Poisonous Plants in Western China, Northwest A&F University, Yangling, China
| | - Mengran Zhang
- College of Veterinary Medicine, Northwest A&F University, Yangling, China
- Institute of Poisonous Plants in Western China, Northwest A&F University, Yangling, China
| | - Hao Lu
- College of Veterinary Medicine, Northwest A&F University, Yangling, China
- Institute of Poisonous Plants in Western China, Northwest A&F University, Yangling, China
| | - Chenchen Wu
- College of Veterinary Medicine, Northwest A&F University, Yangling, China
- Institute of Poisonous Plants in Western China, Northwest A&F University, Yangling, China
| | - Baoyu Zhao
- College of Veterinary Medicine, Northwest A&F University, Yangling, China
- Institute of Poisonous Plants in Western China, Northwest A&F University, Yangling, China
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Buckland CE, Smith AJAC, Thomas DSG. A comparison in species distribution model performance of succulents using key species and subsets of environmental predictors. Ecol Evol 2022; 12:e8981. [PMID: 35784021 PMCID: PMC9170539 DOI: 10.1002/ece3.8981] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2022] [Accepted: 05/11/2022] [Indexed: 11/24/2022] Open
Abstract
Identifying the environmental drivers of the global distribution of succulent plants using the Crassulacean acid metabolism pathway of photosynthesis has previously been investigated through ensemble-modeling of species delimiting the realized niche of the natural succulent biome. An alternative approach, which may provide further insight into the fundamental niche of succulent plants in the absence of dispersal limitation, is to model the distribution of selected species that are globally widespread and have become naturalized far beyond their native habitats. This could be of interest, for example, in defining areas that may be suitable for cultivation of alternative crops resilient to future climate change. We therefore explored the performance of climate-only species distribution models (SDMs) in predicting the drivers and distribution of two widespread CAM plants, Opuntia ficus-indica and Euphorbia tirucalli. Using two different algorithms and five predictor sets, we created distribution models for these exemplar species and produced an updated map of global inter-annual rainfall predictability. No single predictor set produced markedly more accurate models, with the basic bioclim-only predictor set marginally out-performing combinations with additional predictors. Minimum temperature of the coldest month was the single most important variable in determining spatial distribution, but additional predictors such as precipitation and inter-annual precipitation variability were also important in explaining the differences in spatial predictions between SDMs. When compared against previous projections, an a posteriori approach correctly does not predict distributions in areas of ecophysiological tolerance yet known absence (e.g., due to biotic competition). An updated map of inter-annual rainfall predictability has successfully identified regions known to be depauperate in succulent plants. High model performance metrics suggest that the majority of potentially suitable regions for these species are predicted by these models with a limited number of climate predictors, and there is no benefit in expanding model complexity and increasing the potential for overfitting.
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Affiliation(s)
| | | | - David S. G. Thomas
- School of Geography and the EnvironmentUniversity of OxfordOxfordUK
- Geography, Archaeology and Environmental StudiesUniversity of the WitwatersrandJohannesburgSouth Africa
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The Genus Kalanchoe (Crassulaceae) in Ecuador: From Gardens to the Wild. PLANTS 2022; 11:plants11131746. [PMID: 35807700 PMCID: PMC9269312 DOI: 10.3390/plants11131746] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/03/2022] [Revised: 06/27/2022] [Accepted: 06/28/2022] [Indexed: 11/16/2022]
Abstract
The genus Kalanchoe, mostly indigenous from Madagascar and Tropical Africa, is widely traded for ornamental value. In this study, we provided an updated list of wild and cultivated Kalanchoe taxa in Ecuador; we analyzed the temporal–spatial pattern of their records, and we categorized the invasion status for each taxon and its environment preferences. The records of any taxa belonging to this genus were compiled from an extensive search using various information sources. Our results confirmed the presence of 16 taxa of Kalanchoe in the country. Seven species and a hybrid were detected in the wild. Kalanchoe densiflora, K. laxiflora, K. pinnata, K. tubiflora, and K. ×houghtonii were categorized as invasive. We detected invasive records of some of these plants in protected areas. Almost all taxa had at least one record as cultivated, suggesting that the invasion pathway is ornamental trade. Kalanchoe pinnata individuals in the wild were recorded in the four biogeographic regions of Ecuador, which could be associated with the wide range of precipitations and temperatures in which the species may dwell. Our study highlights the importance of reducing the ornamental value and limiting the use of Kalanchoe taxa with invasive potential in horticulture and promoting, instead, the use of indigenous species.
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Italian Vascular Flora: New Findings, Updates and Exploration of Floristic Similarities between Regions. DIVERSITY 2021. [DOI: 10.3390/d13110600] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
The tradition of floristic studies in Italy has made it possible to obtain a good knowledge of plant diversity both on a national and regional scale. However, the lack of knowledge for some areas, advances in plant systematics and human activities related to globalization, highlight the need for further studies aimed at improving floristic knowledge. In this paper, based on fieldwork and herbaria and literature surveys, we update the knowledge on the Italian vascular flora and analyze the floristic similarities between the administrative regions. Four taxa, all exotic, were recorded for the first time in Italy and Europe. In detail, Elaeodendron croceum, Kalanchoë blossfeldiana, and Sedum spathulifolium var. spathulifolium were found as casual aliens, while Oxalis brasiliensis was reported as historical record based on some herbarium specimens. Furthermore, Kalanchoë laxiflora was confirmed as a casual alien species for Italy and Europe. Status changes for some taxa were proposed at both national and regional levels, as well as many taxa were reported as new or confirmed at the regional level. Currently the Italian vascular flora comprises 9150 taxa of which 7547 are native (of which 1598 are Italian endemics) and 1603 are exotic at the national level. The multivariate analysis of updated floristic data on a regional scale showed a clear distribution along the latitudinal gradient, in accordance with the natural geographical location of the regions in Italy. This pattern of plants distribution was not affected by the introduction of alien species. Despite some taxonomic and methodological issues which are still open, the data obtained confirm the important role of floristic investigations in the field and in herbaria, as well as the collaborative approach among botanists, in order to improve the knowledge of the Italian and European vascular flora.
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García-Pérez P, Zhang L, Miras-Moreno B, Lozano-Milo E, Landin M, Lucini L, Gallego PP. The Combination of Untargeted Metabolomics and Machine Learning Predicts the Biosynthesis of Phenolic Compounds in Bryophyllum Medicinal Plants (Genus Kalanchoe). PLANTS (BASEL, SWITZERLAND) 2021; 10:plants10112430. [PMID: 34834793 PMCID: PMC8620224 DOI: 10.3390/plants10112430] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/10/2021] [Revised: 11/08/2021] [Accepted: 11/09/2021] [Indexed: 06/13/2023]
Abstract
Phenolic compounds constitute an important family of natural bioactive compounds responsible for the medicinal properties attributed to Bryophyllum plants (genus Kalanchoe, Crassulaceae), but their production by these medicinal plants has not been characterized to date. In this work, a combinatorial approach including plant tissue culture, untargeted metabolomics, and machine learning is proposed to unravel the critical factors behind the biosynthesis of phenolic compounds in these species. The untargeted metabolomics revealed 485 annotated compounds that were produced by three Bryophyllum species cultured in vitro in a genotype and organ-dependent manner. Neurofuzzy logic (NFL) predictive models assessed the significant influence of genotypes and organs and identified the key nutrients from culture media formulations involved in phenolic compound biosynthesis. Sulfate played a critical role in tyrosol and lignan biosynthesis, copper in phenolic acid biosynthesis, calcium in stilbene biosynthesis, and magnesium in flavanol biosynthesis. Flavonol and anthocyanin biosynthesis was not significantly affected by mineral components. As a result, a predictive biosynthetic model for all the Bryophyllum genotypes was proposed. The combination of untargeted metabolomics with machine learning provided a robust approach to achieve the phytochemical characterization of the previously unexplored species belonging to the Bryophyllum subgenus, facilitating their biotechnological exploitation as a promising source of bioactive compounds.
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Affiliation(s)
- Pascual García-Pérez
- Agrobiotech for Health Group, Plant Biology and Soil Science Department, Biology Faculty, University of Vigo, E-36310 Vigo, Spain; (P.G.-P.); (E.L.-M.); (P.P.G.)
- CITACA—Agri-Food Research and Transfer Cluster, University of Vigo, E-32004 Ourense, Spain
| | - Leilei Zhang
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Via Emilia Parmense 84, 29122 Piacenza, Italy; (L.Z.); (B.M.-M.)
| | - Begoña Miras-Moreno
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Via Emilia Parmense 84, 29122 Piacenza, Italy; (L.Z.); (B.M.-M.)
| | - Eva Lozano-Milo
- Agrobiotech for Health Group, Plant Biology and Soil Science Department, Biology Faculty, University of Vigo, E-36310 Vigo, Spain; (P.G.-P.); (E.L.-M.); (P.P.G.)
- CITACA—Agri-Food Research and Transfer Cluster, University of Vigo, E-32004 Ourense, Spain
| | - Mariana Landin
- I+D Farma Group (GI-1645), Department of Pharmacology, Pharmacy and Pharmaceutical Technology, Faculty of Pharmacy, Universidade de Santiago de Compostela, E-15782 Santiago de Compostela, Spain;
- Health Research Institute of Santiago de Compostela (IDIS), E-15706 Santiago de Compostela, Spain
| | - Luigi Lucini
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Via Emilia Parmense 84, 29122 Piacenza, Italy; (L.Z.); (B.M.-M.)
| | - Pedro P. Gallego
- Agrobiotech for Health Group, Plant Biology and Soil Science Department, Biology Faculty, University of Vigo, E-36310 Vigo, Spain; (P.G.-P.); (E.L.-M.); (P.P.G.)
- CITACA—Agri-Food Research and Transfer Cluster, University of Vigo, E-32004 Ourense, Spain
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Rather ZA, Ahmad R, Dar AR, Dar TUH, Khuroo AA. Predicting shifts in distribution range and niche breadth of plant species in contrasting arid environments under climate change. ENVIRONMENTAL MONITORING AND ASSESSMENT 2021; 193:427. [PMID: 34143311 DOI: 10.1007/s10661-021-09160-5] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/05/2021] [Accepted: 05/26/2021] [Indexed: 06/12/2023]
Abstract
Arid environments face extreme risk from contemporary climate change; therefore, predicting the shifts in species distribution range and niche breadth in these environments assumes urgent research priority. Here we report the potential distribution and predict future distribution range of two model plant species typically representing contrasting environments across Asia and Africa: hot-arid Ephedra foliata and cold-arid E. gerardiana. We adopted a comparative modelling approach and used occurrence points from extensive field surveys, supplemented with herbaria records and publicly available distribution data. Our study reveals that currently an area of 8.797334 × 106 km2 (8.8%) is potentially suitable for E. foliata and nearly half 4.759326 × 106 km2 (4.8%) for E. gerardiana. Under future climate change scenarios, distribution range of E. foliata is predicted to expand but contract in E. gerardiana. Similarly, E. foliata showed broader niche breadth which is predicted to increase under B1 (0.097-0.125) and B2 (0.878-0.930) climatic change scenarios. In contrast, E. gerardiana had narrower niche breadth and expected to further decrease under B1 (0.081-0.078) and B2 (0.878-0.854). The most influential bioclimatic variable governing the potential distribution and niche breadth of E. foliata was the precipitation of warmest quarter, whereas that of E. gerardiana was temperature seasonality. The results from our study can help in developing potential indicator plant species for assessment and monitoring of distribution range shifts in response to changing climate in the arid environments.
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Affiliation(s)
- Zubair Ahmad Rather
- Centre for Biodiversity and Taxonomy, Department of Botany, University of Kashmir, Srinagar, 190006, India.
| | - Rameez Ahmad
- Centre for Biodiversity and Taxonomy, Department of Botany, University of Kashmir, Srinagar, 190006, India
| | - Abdul Rashid Dar
- Department of Botany, Govt, Degree College (Boys), Kupwara, Jammu and Kashmir, India
| | | | - Anzar Ahmad Khuroo
- Centre for Biodiversity and Taxonomy, Department of Botany, University of Kashmir, Srinagar, 190006, India
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Barone G, Domina G, Di Gristina E. Comparison of different methods to assess the distribution of alien plants along the road network and use of Google Street View panoramas interpretation in Sicily (Italy) as a case study. Biodivers Data J 2021; 9:e66013. [PMID: 34093056 PMCID: PMC8175327 DOI: 10.3897/bdj.9.e66013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2021] [Accepted: 05/04/2021] [Indexed: 11/30/2022] Open
Abstract
The survey by foot in the field is compared to the survey from a car, the photo-interpretation of Google Street View (GSV) panoramas continuously and at intervals of 1.5 km and the photo-interpretation of Google Earth aerial images on a 10 km stretch of road in Sicily. The survey by foot was used as reference for the other methods. The interpretation of continuous GSV panoramas gave similar results as the assessment by car in terms of the number of species identified and their location, but with lower cost. The interpretation online of aerial photos allowed the identification of a limited number of taxa, but gave a good localisation for them. Interpretation of GSV panoramas, each of 1.5 km, allowed the recognition of twice as many taxa as the interpretation of aerial photos and taking half the time, but did not allow a complete localisation. None of these methods alone seems sufficient to carry out a complete survey. A mixture of different techniques, which may vary according to the available resources and the goal to be achieved, seems to be the best compromise. To further test the capabilities of the survey using the interpretation of GSV panoramas every 1.5 km along the roads, we proceeded to study the alien plants along 3500 km of the road network on the island of Sicily. This survey identified only 10% of the known species for the region, but allowed us to trace the distribution of invasive species whose distribution is currently poorly recorded.
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Affiliation(s)
- Giulio Barone
- Department of Agricultural, Food and Forest Sciences, University of Palermo, Palermo, Italy Department of Agricultural, Food and Forest Sciences, University of Palermo Palermo Italy
| | - Gianniantonio Domina
- Department of Agricultural, Food and Forest Sciences, University of Palermo, Palermo, Italy Department of Agricultural, Food and Forest Sciences, University of Palermo Palermo Italy
| | - Emilio Di Gristina
- Department of Agricultural, Food and Forest Sciences, University of Palermo, Palermo, Italy Department of Agricultural, Food and Forest Sciences, University of Palermo Palermo Italy
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García-Pérez P, Lozano-Milo E, Landin M, Gallego PP. From Ethnomedicine to Plant Biotechnology and Machine Learning: The Valorization of the Medicinal Plant Bryophyllum sp. PHARMACEUTICALS (BASEL, SWITZERLAND) 2020; 13:ph13120444. [PMID: 33291844 PMCID: PMC7762000 DOI: 10.3390/ph13120444] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/10/2020] [Revised: 12/02/2020] [Accepted: 12/02/2020] [Indexed: 12/18/2022]
Abstract
The subgenus Bryophyllum includes about 25 plant species native to Madagascar, and is widely used in traditional medicine worldwide. Different formulations from Bryophyllum have been employed for the treatment of several ailments, including infections, gynecological disorders, and chronic diseases, such as diabetes, neurological and neoplastic diseases. Two major families of secondary metabolites have been reported as responsible for these bioactivities: phenolic compounds and bufadienolides. These compounds are found in limited amounts in plants because they are biosynthesized in response to different biotic and abiotic stresses. Therefore, novel approaches should be undertaken with the aim of achieving the phytochemical valorization of Bryophyllum sp., allowing a sustainable production that prevents from a massive exploitation of wild plant resources. This review focuses on the study of phytoconstituents reported on Bryophyllum sp.; the application of plant tissue culture methodology as a reliable tool for the valorization of bioactive compounds; and the application of machine learning technology to model and optimize the full phytochemical potential of Bryophyllum sp. As a result, Bryophyllum species can be considered as a promising source of plant bioactive compounds, with enormous antioxidant and anticancer potential, which could be used for their large-scale biotechnological exploitation in cosmetic, food, and pharmaceutical industries.
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Affiliation(s)
- Pascual García-Pérez
- Applied Plant & Soil Biology, Plant Biology and Soil Science Department, Biology Faculty, University of Vigo, E-36310 Vigo, Spain; (P.G.-P.); (E.L.-M.)
- CITACA—Agri-Food Research and Transfer Cluster, University of Vigo, E-32004 Ourense, Spain
| | - Eva Lozano-Milo
- Applied Plant & Soil Biology, Plant Biology and Soil Science Department, Biology Faculty, University of Vigo, E-36310 Vigo, Spain; (P.G.-P.); (E.L.-M.)
- CITACA—Agri-Food Research and Transfer Cluster, University of Vigo, E-32004 Ourense, Spain
| | - Mariana Landin
- Pharmacology, Pharmacy and Pharmaceutical Technology Department, Grupo I+D Farma (GI-1645), Pharmacy Faculty, University of Santiago, E-15782 Santiago de Compostela, Spain;
- Health Research Institute of Santiago de Compostela (IDIS), E-15782 Santiago de Compostela, Spain
| | - Pedro P. Gallego
- Applied Plant & Soil Biology, Plant Biology and Soil Science Department, Biology Faculty, University of Vigo, E-36310 Vigo, Spain; (P.G.-P.); (E.L.-M.)
- CITACA—Agri-Food Research and Transfer Cluster, University of Vigo, E-32004 Ourense, Spain
- Correspondence:
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García-Pérez P, Lozano-Milo E, Landin M, Gallego PP. Machine Learning Unmasked Nutritional Imbalances on the Medicinal Plant Bryophyllum sp. Cultured in vitro. FRONTIERS IN PLANT SCIENCE 2020; 11:576177. [PMID: 33329638 PMCID: PMC7729169 DOI: 10.3389/fpls.2020.576177] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/25/2020] [Accepted: 11/06/2020] [Indexed: 05/20/2023]
Abstract
Plant nutrition is a crucial factor that is usually underestimated when designing plant in vitro culture protocols of unexploited plants. As a complex multifactorial process, the study of nutritional imbalances requires the use of time-consuming experimental designs and appropriate statistical and multiple regression analysis for the determination of critical parameters, whose results may be difficult to interpret when the number of variables is large. The use of machine learning (ML) supposes a cutting-edge approach to investigate multifactorial processes, with the aim of detecting non-linear relationships and critical factors affecting a determined response and their concealed interactions. Thus, in this work we applied artificial neural networks coupled to fuzzy logic, known as neurofuzzy logic, to determine the critical factors affecting the mineral nutrition of medicinal plants belonging to Bryophyllum subgenus cultured in vitro. The application of neurofuzzy logic algorithms facilitate the interpretation of the results, as the technology is able to generate useful and understandable "IF-THEN" rules, that provide information about the factor(s) involved in a certain response. In this sense, ammonium, sulfate, molybdenum, copper and sodium were the most important nutrients that explain the variation in the in vitro culture establishment of the medicinal plants in a species-dependent manner. Thus, our results indicate that Bryophyllum spp. display a fine-tuning regulation of mineral nutrition, that was reported for the first time under in vitro conditions. Overall, neurofuzzy model was able to predict and identify masked interactions among such factors, providing a source of knowledge (helpful information) from the experimental data (non-informative per se), in order to make the exploitation and valorization of medicinal plants with high phytochemical potential easier.
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Affiliation(s)
- Pascual García-Pérez
- Applied Plant and Soil Biology, Plant Biology and Soil Science Department, Biology Faculty, University of Vigo, Vigo, Spain
- Clúster de Investigación e Transferencia Agroalimentaria do Campus da Auga - Agri-Food Research and Transfer Cluster, University of Vigo, Ourense, Spain
| | - Eva Lozano-Milo
- Applied Plant and Soil Biology, Plant Biology and Soil Science Department, Biology Faculty, University of Vigo, Vigo, Spain
- Clúster de Investigación e Transferencia Agroalimentaria do Campus da Auga - Agri-Food Research and Transfer Cluster, University of Vigo, Ourense, Spain
| | - Mariana Landin
- Grupo I+D Farma (GI-1645), AeMat, Pharmacology, Pharmacy and Pharmaceutical Technology Department, Pharmacy Faculty, University of Santiago, Santiago de Compostela, Spain
- Health Research Institute of Santiago de Compostela (IDIS), Santiago de Compostela, Spain
| | - Pedro Pablo Gallego
- Applied Plant and Soil Biology, Plant Biology and Soil Science Department, Biology Faculty, University of Vigo, Vigo, Spain
- Clúster de Investigación e Transferencia Agroalimentaria do Campus da Auga - Agri-Food Research and Transfer Cluster, University of Vigo, Ourense, Spain
- *Correspondence: Pedro Pablo Gallego
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