1
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von Holdt BM, Kartzinel RY, van Oers K, Verhoeven KJF, Ouyang JQ. Changes in the rearing environment cause reorganization of molecular networks associated with DNA methylation. J Anim Ecol 2023; 92:648-664. [PMID: 36567635 DOI: 10.1111/1365-2656.13878] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2022] [Accepted: 12/22/2022] [Indexed: 12/27/2022]
Abstract
Disentangling the interaction between the genetic basis and environmental context underlying phenotypic variation is critical for understanding organismal evolution. Environmental change, such as increased rates of urbanization, can induce shifts in phenotypic plasticity with some individuals adapting to city life while others are displaced. A key trait that can facilitate adaptation is the degree at which animals respond to stressors. This stress response, which includes elevation of baseline circulating concentrations of glucocorticoids, has a heritable component and exhibits intra- and inter-individual variation. However, the mechanisms behind this variability and whether they might be responsible for adaptation to different environments are not known. Variation in DNA methylation can be a potential mechanism that mediates environmental effects on the stress response, as early-life stressors increase glucocorticoid concentrations and change adult phenotype. We used an inter- and intra-environmental cross-foster experiment to analyse the contribution of DNA methylation to early-life phenotypic variation. We found that at hatching, urban house wren (Troglodytes aedon) offspring had higher methylation frequencies compared with their rural counterparts. We also observed age-related patterns in offspring methylation, indicating the developmental effects of the rearing environment on methylation. At fledgling, differential methylation analyses showed that cellular respiration genes were differentially methylated in broods of different origins and behavioural and metabolism genes were differentially methylated in broods of different rearing environments. Lastly, hyper-methylation of a single gene (CNTNAP2) is associated with decreased glucocorticoid levels and the rearing environment. These differential methylation patterns linked to a specific physiological phenotype suggest that DNA methylation may be a mechanism by which individuals adjust to novel environments during their lifespan. Characterizing genetic and environmental influences on methylation is critical for understanding the role of epigenetic mechanisms in evolutionary adaptation.
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Affiliation(s)
- Bridgett M von Holdt
- Ecology & Evolutionary Biology, Princeton University, Princeton, New Jersey, USA
| | - Rebecca Y Kartzinel
- Ecology & Evolutionary Biology, Brown University, Providence, Rhode Island, USA
| | - Kees van Oers
- Department of Animal Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands
| | - Koen J F Verhoeven
- Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands
| | - Jenny Q Ouyang
- Department of Biology, University of Nevada, Reno, Nevada, USA
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2
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Jensen JK, Ekroos J, Watson H, Salmón P, Olsson P, Isaksson C. Urban tree composition is associated with breeding success of a passerine bird, but effects vary within and between years. Oecologia 2023; 201:585-597. [PMID: 36681784 PMCID: PMC10038977 DOI: 10.1007/s00442-023-05319-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2022] [Accepted: 01/09/2023] [Indexed: 01/22/2023]
Abstract
Birds breeding in urban environments have lower reproductive output compared to rural conspecifics, most likely because of food limitation. However, which characteristics of urban environments may cause this deficiency is not clear. Here, we investigated how tree composition within urban territories of passerine birds is associated with breeding probability and reproductive success. We used 7 years of data of breeding occupancy for blue and great tits (Cyanistes caeruleus; Parus major) and several reproductive traits for great tits, from 400 urban nest boxes located in 5 parks within the city of Malmö, Sweden. We found that tits, overall, were less likely to breed in territories dominated by either non-native trees or beech trees. Great tit chicks reared in territories dominated by non-native trees weighed significantly less, compared to territories with fewer non-native trees. An earlier onset of breeding correlated with increased chick weight in great tits. Increasing number of common oak trees (Quercus robur) was associated with delayed onset of breeding in great tits. Notably, as offspring survival probability generally increased by breeding earlier, in particular in oak-dominated territories, our results suggest that delayed onset of breeding induced by oak trees may be maladaptive and indicate a mismatch to this food source. Our results demonstrate that tree composition may have important consequences on breeding success of urban birds, but some of these effects are not consistent between years, highlighting the need to account for temporal effects to understand determinants of breeding success and inform optimal management in urban green spaces.
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Affiliation(s)
- Johan Kjellberg Jensen
- Department of Biology, Lund University, Lund, Sweden.
- Centre for Environmental and Climate Science (CEC), Lund University, Lund, Sweden.
| | - Johan Ekroos
- Centre for Environmental and Climate Science (CEC), Lund University, Lund, Sweden
- Department of Agricultural Sciences, University of Helsinki, Helsinki, Finland
| | - Hannah Watson
- Department of Biology, Lund University, Lund, Sweden
| | - Pablo Salmón
- Institute of Biodiversity, Animal Health and Comparative Medicine, University of Glasgow, Glasgow, UK
| | - Peter Olsson
- Centre for Environmental and Climate Science (CEC), Lund University, Lund, Sweden
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3
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Heppner JJ, Krause JS, Ouyang JQ. Urbanization and maternal hormone transfer: Endocrine and morphological phenotypes across ontogenetic stages. Gen Comp Endocrinol 2023; 333:114166. [PMID: 36402244 DOI: 10.1016/j.ygcen.2022.114166] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/02/2022] [Revised: 10/11/2022] [Accepted: 11/12/2022] [Indexed: 11/18/2022]
Abstract
The phenotypes observed in urban and rural environments are often distinct; however, it remains unclear how these novel urban phenotypes arise. Hormone-mediated maternal effects likely play a key role in shaping developmental trajectories of offspring in different environments. Thus, we measured corticosterone (Cort) and testosterone (T) concentrations in eggs across the laying sequence in addition to Cort concentrations in nestling and adult female house wrens (Troglodytes aedon) at one urban and one rural site. We found that egg T concentrations were not different between birds from urban and rural sites. However, across all life stages (egg, nestling, and adult female), Cort concentrations were higher at the urban site. Additionally, urban nestling Cort concentrations, but not rural, correlated with fine-scale urban density scores. Furthermore, rural egg volume increased over the laying sequence, but urban egg volume leveled off mid-sequence, suggesting either that urban mothers are resource limited or that they are employing a different brood development strategy than rural mothers. Our study is one of the first to show that egg hormone concentrations differ in an urban environment with differences persisting in chick development and adult life stages. We suggest that maternal endocrine programing may shape offspring phenotypes in urban environments and are an overlooked yet important aspect underlying mechanisms of urban evolution.
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Affiliation(s)
| | - Jesse S Krause
- Department of Biology, University of Nevada, Reno, Reno, NV, USA
| | - Jenny Q Ouyang
- Department of Biology, University of Nevada, Reno, Reno, NV, USA
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4
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Parenting in the city: effects of urbanization on incubation behaviour and egg temperature in great tits, Parus major. Anim Behav 2022. [DOI: 10.1016/j.anbehav.2022.09.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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5
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White JH, Heppner JJ, Ouyang JQ. Increased lead and glucocorticoid concentrations reduce reproductive success in house sparrows along an urban gradient. ECOLOGICAL APPLICATIONS : A PUBLICATION OF THE ECOLOGICAL SOCIETY OF AMERICA 2022; 32:e2688. [PMID: 35754197 PMCID: PMC9722646 DOI: 10.1002/eap.2688] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2022] [Accepted: 04/18/2022] [Indexed: 06/15/2023]
Abstract
Urbanization is increasing at a rapid pace globally. Understanding the links among environmental characteristics, phenotypes, and fitness enables researchers to predict the impact of changing landscapes on individuals and populations. Although avian reproductive output is typically lower in urban compared with natural areas, the underlying reasons for this discrepancy may lie at the intersection of abiotic and biotic environmental and individual differences. Recent advances in urban ecology highlight the effect of heavy metal contamination on stress physiology. As high levels of glucocorticoid hormones decrease parental investment, these hormones might be the link to decreased reproductive success in areas of high environmental pollution. In this study, we aimed to identify which abiotic stressors are linked to avian reproductive output in urban areas and whether this link is mediated by individual hormone levels. We used fine-scaled estimates (2 m2 spatial resolution) of nighttime light, noise, and urban density to assess their impacts on the physiological condition of adult house sparrows (Passer domesticus). We measured circulating levels of lead and glucocorticoid concentrations in 40 breeding pairs of free-living house sparrows and related these physiological traits to reproductive success. Using structural equation modeling, we found that increased urban density levels linked directly to increased plasma corticosterone and lead concentrations that subsequently led to decreased fledgling mass. Sparrows with increased lead concentrations in plasma also had higher corticosterone levels. Although urban areas may be attractive due to decreased natural predators and available nesting sites, they may act as ecological traps that increase physiological damage and decrease fitness. To illustrate, avian development is strongly explained by parental corticosterone levels, which vary significantly in response to urban density and lead pollution. With fine-scale ecological mapping for a species with small home ranges, we demonstrated the presence and impacts of urban stressors in a small city with high human densities.
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Affiliation(s)
- Justin H White
- Department of Economics and Geosciences, United States Air Force Academy, Colorado Springs, Colorado, USA
| | | | - Jenny Q Ouyang
- Department of Biology, University of Nevada Reno, Reno, Nevada, USA
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6
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Capilla‐Lasheras P, Thompson MJ, Sánchez‐Tójar A, Haddou Y, Branston CJ, Réale D, Charmantier A, Dominoni DM. A global meta-analysis reveals higher variation in breeding phenology in urban birds than in their non-urban neighbours. Ecol Lett 2022; 25:2552-2570. [PMID: 36136999 PMCID: PMC9826320 DOI: 10.1111/ele.14099] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2022] [Accepted: 08/18/2022] [Indexed: 01/11/2023]
Abstract
Cities pose a major ecological challenge for wildlife worldwide. Phenotypic variation, which can result from underlying genetic variation or plasticity, is an important metric to understand eco-evolutionary responses to environmental change. Recent work suggests that urban populations might have higher levels of phenotypic variation than non-urban counterparts. This prediction, however, has never been tested across species nor over a broad geographical range. Here, we conducted a meta-analysis of the avian literature to compare urban versus non-urban means and variation in phenology (i.e. lay date) and reproductive effort (i.e. clutch size, number of fledglings). First, we show that urban populations reproduce earlier and have smaller broods than non-urban conspecifics. Second, we show that urban populations have higher phenotypic variation in laying date than non-urban populations. This result arises from differences between populations within breeding seasons, conceivably due to higher landscape heterogeneity in urban habitats. These findings reveal a novel effect of urbanisation on animal life histories with potential implications for species adaptation to urban environments (which will require further investigation). The higher variation in phenology in birds subjected to urban disturbance could result from plastic responses to a heterogeneous environment, or from higher genetic variation in phenology, possibly linked to higher evolutionary potential.
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Affiliation(s)
- Pablo Capilla‐Lasheras
- School of Biodiversity, One Health and Veterinary MedicineUniversity of GlasgowGlasgowUK
| | - Megan J. Thompson
- Département des Sciences BiologiquesUniversité du Québec à MontréalMontrealCanada,Centre d'Ecologie Fonctionnelle et EvolutiveUniversité de Montpellier, CNRS, EPHE, IRDMontpellierFrance
| | | | - Yacob Haddou
- School of Biodiversity, One Health and Veterinary MedicineUniversity of GlasgowGlasgowUK
| | - Claire J. Branston
- School of Biodiversity, One Health and Veterinary MedicineUniversity of GlasgowGlasgowUK
| | - Denis Réale
- Département des Sciences BiologiquesUniversité du Québec à MontréalMontrealCanada
| | - Anne Charmantier
- Centre d'Ecologie Fonctionnelle et EvolutiveUniversité de Montpellier, CNRS, EPHE, IRDMontpellierFrance
| | - Davide M. Dominoni
- School of Biodiversity, One Health and Veterinary MedicineUniversity of GlasgowGlasgowUK
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7
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Baldan D, van Loon EE. Songbird parents coordinate offspring provisioning at fine spatio-temporal scales. J Anim Ecol 2022; 91:1316-1326. [PMID: 35437781 PMCID: PMC9321892 DOI: 10.1111/1365-2656.13702] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2021] [Accepted: 04/07/2022] [Indexed: 01/20/2023]
Abstract
For parents, rearing offspring together is far from a purely cooperative exercise, as a conflict of interest (‘sexual conflict’) exists over their optimum level of care. Recent theory emphasizes that sexual conflict can be evolutionarily resolved, and complete parental cooperation can occur, if parents directly respond (‘negotiate’) to each other and coordinate their level of care. Despite numerous experiments showing that parents are responsive to each other, we still lack empirical evidence of the behavioural mechanisms by which this negotiation occurs. In this study, we investigated the spatio‐temporal coordination of parental provisioning behaviour as a possible mechanism of negotiation over parental care. We deployed an automated radiotracking technology to track the provisioning activity of wild great tit Parus major pairs during chick rearing. Our analyses represent the first detailed spatial and temporal description of foraging coordination in songbird parents in a natural context. We demonstrate that the foraging behaviour of the two parents is highly coordinated in space and time, with parents changing their foraging locations in conjunction with their partners' movements. Therefore, foraging coordination could be a mechanism by which parents directly monitor and respond to each other's level of investment.
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Affiliation(s)
- Davide Baldan
- Department of Animal Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands.,Department of Biology, University of Nevada, Reno, Reno, NV, USA
| | - E Emiel van Loon
- Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Amsterdam, The Netherlands
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8
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Diet composition and diversity does not explain fewer, smaller urban nestlings. PLoS One 2022; 17:e0264381. [PMID: 35231042 PMCID: PMC8887731 DOI: 10.1371/journal.pone.0264381] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2021] [Accepted: 12/16/2021] [Indexed: 11/25/2022] Open
Abstract
The reproductive success of animals breeding in cities is often lower compared to counterparts that inhabit rural, suburban, and peri-urban areas. Urban dwelling may be especially costly for offspring development and survival. Diet composition and diversity may underlie factors that lead to lower fitness, particularly if prey abundance and quality decline in modified environments. Moreover, breeding success may change over the course of a season, an effect that may be augmented in urban areas. In this study, we tested the hypothesis that habitat and date affected nestling house wren (Troglodytes aedon) body condition and survival, and examined whether diet explained differences in nestling success. We monitored urban and rural populations of house wrens breeding in nest boxes, and tested whether clutch size, nestling survivorship, and nestling body condition varied by habitat or by date, and then characterized the diet of a subset of nestlings with DNA metabarcoding of fecal samples. Urbanization had clear impacts on house wren nestling fitness: urban broods contained fewer, smaller nestlings. Early nestling survival decreased as the breeding season progressed, and this effect was more pronounced in the urban population. However, the diets of urban and rural nestlings were similar and did not explain differences in body condition. Instead, across populations, diet changed with date, becoming less diverse, with fewer Lepidoptera and more Orthoptera. Regardless of habitat, adult house wrens provide nestlings with similar types of foods, but other factors, such as quantity or quality of prey delivered, may lead to fitness disparities between urban and rural nestlings.
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9
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Sinkovics C, Seress G, Pipoly I, Vincze E, Liker A. Great tits feed their nestlings with more but smaller prey items and fewer caterpillars in cities than in forests. Sci Rep 2021; 11:24161. [PMID: 34921179 PMCID: PMC8683465 DOI: 10.1038/s41598-021-03504-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2021] [Accepted: 11/15/2021] [Indexed: 11/29/2022] Open
Abstract
Rapidly increasing urbanisation is one of the most significant anthropogenic environmental changes which can affect demographic traits of animal populations, for example resulting in reduced reproductive success. The food limitation hypothesis suggests that the shortage of high-quality nestling food in cities is a major factor responsible for the reduced reproductive performance in insectivorous birds. To study this explanation, we collected data on the parental provisioning behaviour of urban and forest great tits (Parus major) in three years that varied both in caterpillar availability (the main food of great tit nestlings) and in reproductive success of the birds. In all years, urban parents provisioned caterpillars in a smaller proportion to their nestlings, but the total amount of food per nestling (estimated by the volumes of all prey items) did not differ between habitats. In the two years with much lower reproductive success in urban than forest habitats, urban parents had higher provisioning rates, but provided more non-arthropod food and brought smaller prey items than forest parents. In the year with reduced habitat difference in reproductive success, urban parents were able to compensate for the scarcity of caterpillars by provisioning other arthropods rather than non-arthropod food, and by delivering larger preys than in the other years. Specifically, in this latter year, caterpillars provisioned by urban pairs were cc. twice as large as in the other two years, and were similar in size to caterpillars provisioned in the forest broods. These results show that although urban great tit parents can provide the same quantity of food per nestling as forest parents by reducing their brood size and increasing the per capita feeding rates for nestlings, they cannot compensate fully for the scarcity of high-quality preys (caterpillars) in poor years. In some years, however, favourable conditions for urban caterpillar development can greatly reduce food limitation in cities, allowing urban birds to achieve higher reproductive success. We suggest that urban green areas designed and managed in a way to facilitate conditions for phytophagous arthropods could improve habitat quality for urban birds.
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Affiliation(s)
- Csenge Sinkovics
- Behavioural Ecology Research Group, Center for Natural Sciences, University of Pannonia, Veszprém, PO Box 1158, 8210, Hungary.
| | - Gábor Seress
- Behavioural Ecology Research Group, Center for Natural Sciences, University of Pannonia, Veszprém, PO Box 1158, 8210, Hungary.,MTA-PE Evolutionary Ecology Research Group, University of Pannonia, Veszprém, PO Box 1158, 8210, Hungary
| | - Ivett Pipoly
- Behavioural Ecology Research Group, Center for Natural Sciences, University of Pannonia, Veszprém, PO Box 1158, 8210, Hungary.,MTA-PE Evolutionary Ecology Research Group, University of Pannonia, Veszprém, PO Box 1158, 8210, Hungary
| | - Ernő Vincze
- Behavioural Ecology Research Group, Center for Natural Sciences, University of Pannonia, Veszprém, PO Box 1158, 8210, Hungary.,MTA-PE Evolutionary Ecology Research Group, University of Pannonia, Veszprém, PO Box 1158, 8210, Hungary.,Theoretical Population Ecology and Evolution Group, Department of Biology, Lund University, Lund, Sweden
| | - András Liker
- Behavioural Ecology Research Group, Center for Natural Sciences, University of Pannonia, Veszprém, PO Box 1158, 8210, Hungary. .,MTA-PE Evolutionary Ecology Research Group, University of Pannonia, Veszprém, PO Box 1158, 8210, Hungary.
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10
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Griffioen M, Iserbyt A, Müller W. Turn taking is not restricted by task specialisation but does not facilitate equality in offspring provisioning. Sci Rep 2021; 11:21884. [PMID: 34750443 PMCID: PMC8575876 DOI: 10.1038/s41598-021-01298-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2021] [Accepted: 10/11/2021] [Indexed: 11/16/2022] Open
Abstract
Sexual conflict arises when two individuals invest in their common offspring because both individuals benefit when their partner invests more. Conditional cooperation is a theoretical concept that could resolve this conflict. Here, parents are thought to motivate each other to contribute to provisioning visits by following the rules of turn taking, which results in equal and efficient investment. However, parents have other tasks besides provisioning, which might hinder taking turns. To investigate restrictions by other care tasks and whether turn taking can be used to match investment, we manipulated brooding duration in female blue tits (Cyanistes caeruleus) during the early nestling phase by changing nest box temperature. As expected, females subjected to cold conditions brooded longer than females under warm conditions. Yet, contrary to our prediction, females had similar visit rates in both treatments, which suggests that females in the cold treatment invested more overall. In addition, the females' turn taking level was higher in the more demanding cold condition (and the calculated randomised turn taking levels of females did not differ), hence females don't seem to be restricted in their turn taking strategy by other care tasks. However, males did not seem to match the females' turn taking levels because they did not adjust their visit rates. Thus, level of turn taking was not restricted by an other sex-specific task in females and did not facilitate a greater investment by their male partners.
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Affiliation(s)
- Maaike Griffioen
- Department of Biology, Behavioural Ecology and Ecophysiology Research Group, University of Antwerp, Wilrijk, Belgium.
| | - Arne Iserbyt
- grid.5284.b0000 0001 0790 3681Department of Biology, Behavioural Ecology and Ecophysiology Research Group, University of Antwerp, Wilrijk, Belgium
| | - Wendt Müller
- grid.5284.b0000 0001 0790 3681Department of Biology, Behavioural Ecology and Ecophysiology Research Group, University of Antwerp, Wilrijk, Belgium
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11
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Heppner JJ, Ouyang JQ. Incubation Behavior Differences in Urban and Rural House Wrens, Troglodytes aedon. Front Ecol Evol 2021. [DOI: 10.3389/fevo.2021.590069] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022] Open
Abstract
As global land surfaces are being converted to urban areas at an alarming rate, understanding how individuals respond to urbanization is a key focus for behavioral ecology. As a critical component of avian parental care, incubating adults face a tradeoff between maintaining an optimal thermal environment for the developing embryos while meeting their own energetic demands. Urban habitats are biotically and abiotically different from their rural counterparts, i.e., in food availability, predator compositions, and the thermal environment. Therefore, urban birds may face different incubation challenges than their natural counterparts. We measured incubation behavior of rural and urban house wrens, Troglodytes aedon, with temperature loggers throughout the 12-day period. We found that urban females had more incubation bouts of shorter duration and spent less total time incubating per day than rural females. Results could provide evidence of behavioral shifts of wrens in cities, which have implications for the evolution of parental care. Our findings contribute to our understanding of the behavioral traits needed for city life and possible environmental pressures driving urban adaptations.
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