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Tawfik MM, Betancor MB, McMillan S, Norambuena F, Tocher DR, Douglas A, Martin SAM. Modulation of metabolic and immunoregulatory pathways in the gut transcriptome of Atlantic salmon ( Salmo salar L.) after early nutritional programming during first feeding with plant-based diet. Front Immunol 2024; 15:1412821. [PMID: 39015564 PMCID: PMC11249740 DOI: 10.3389/fimmu.2024.1412821] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2024] [Accepted: 05/27/2024] [Indexed: 07/18/2024] Open
Abstract
Introduction Plant-based nutritional programming is the concept of exposing fish at very early life stages to a plant-based diet for a short duration to improve physiological responses when exposed to a similar plant-rich diet at a later developmental stage. The mechanisms of action underlying nutritional programming have not been fully deciphered, and the responses may be controlled at multiple levels. Methods This 22-week study examines gut transcriptional changes after nutritional programming. Triplicate groups of Atlantic salmon were fed with a plant (V) vs. a marine-rich (M, control) diet for 2 weeks (stimulus phase) at the first exogenous feeding. Both stimulus fish groups (M and V fish) were then fed the M diet for 12 weeks (intermediate phase) and lastly fed the V diet (challenge phase) for 6 weeks, generating two dietary regimes (MMV and VMV) across phases. This study used a whole-transcriptome approach to analyse the effects of the V diet at the end of stimulus (short-term effects) and 22 weeks post-first feeding (long-term effects). After the stimulus, due to its developmental stage, the whole intestine was used, whereas, after the challenge, pyloric caeca and middle and distal intestines were examined. Results and discussion At the stimulus end, genes with increased expression in V fish enriched pathways including regulatory epigenetic responses and lipid metabolism, and genes involved in innate immune response were downregulated. In the middle intestine at the end of the challenge, expression levels of genes of lipid, carbohydrate, and energy metabolism were increased in V fish, while M fish revealed increased expression of genes associated with autoimmune and acute adaptive immune response. The distal intestine of V fish showed increased expression of genes associated with immune response and potential immune tolerance. Conversely, the distal intestine of M fish at challenge revealed upregulation of lipid and carbohydrate metabolic pathways, tissue degeneration, and apoptotic responses. The present study demonstrated nutritional programming-associated changes in the intestinal transcriptome, with altered expression of genes involved in both immune responses and different metabolic processes. While there were limited changes in growth between the groups, the results show that there were transcriptional differences, suggesting a programming response, although the mechanism of this response still requires to be fully elucidated.
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Affiliation(s)
- Marwa Mamdouh Tawfik
- Scottish Fish Immunology Research Centre, School of Biological Sciences, University of Aberdeen, Aberdeen, United Kingdom
- Hydrobiology Department, Veterinary Research Institute, National Research Centre, Giza, Egypt
| | - Mónica B. Betancor
- Institute of Aquaculture, Faculty of Natural Sciences, University of Stirling, Stirling, United Kingdom
| | - Stuart McMillan
- Institute of Aquaculture, Faculty of Natural Sciences, University of Stirling, Stirling, United Kingdom
| | | | - Douglas R. Tocher
- Institute of Aquaculture, Faculty of Natural Sciences, University of Stirling, Stirling, United Kingdom
- Guangdong Provincial Key Laboratory of Marine Biotechnology, Shantou University, Shantou, Guangdong, China
| | - Alex Douglas
- Scottish Fish Immunology Research Centre, School of Biological Sciences, University of Aberdeen, Aberdeen, United Kingdom
| | - Samuel A. M. Martin
- Scottish Fish Immunology Research Centre, School of Biological Sciences, University of Aberdeen, Aberdeen, United Kingdom
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Tawfik MM, Lorgen-Ritchie M, Król E, McMillan S, Norambuena F, Bolnick DI, Douglas A, Tocher DR, Betancor MB, Martin SAM. Modulation of gut microbiota composition and predicted metabolic capacity after nutritional programming with a plant-rich diet in Atlantic salmon (Salmo salar): insights across developmental stages. Anim Microbiome 2024; 6:38. [PMID: 38951941 PMCID: PMC11218362 DOI: 10.1186/s42523-024-00321-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2024] [Accepted: 06/05/2024] [Indexed: 07/03/2024] Open
Abstract
To promote sustainable aquaculture, the formulation of Atlantic salmon (Salmo salar) feeds has changed in recent decades, focusing on replacing standard marine-based ingredients with plant-based alternatives, increasingly demonstrating successful outcomes in terms of fish performance. However, little is known about how these plant-based diets may impact the gut microbiota at first feeding and onwards. Nutritional programming (NP) is one strategy applied for exposing fish to a plant-based (V) diet at an early stage in life to promote full utilisation of plant-based ingredients and prevent potential adverse impacts of exposure to a plant-rich diet later in life. We investigated the impact of NP on gut microbiota by introducing fish to plant ingredients (V fish) during first feeding for a brief period of two weeks (stimulus phase) and compared those to fish fed a marine-based diet (M fish). Results demonstrated that V fish not only maintained growth performance at 16 (intermediate phase) and 22 (challenge phase) weeks post first feeding (wpff) when compared to M fish but also modulated gut microbiota. PERMANOVA general effects revealed gut microbiota dissimilarity by fish group (V vs. M fish) and phases (stimulus vs. intermediate vs. challenge). However, no interaction effect of both groups and phases was demonstrated, suggesting a sustained impact of V diet (nutritional history) on fish across time points/phases. Moreover, the V diet exerted a significant cumulative modulatory effect on the Atlantic salmon gut microbiota at 16 wpff that was not demonstrated at two wpff, although both fish groups were fed the M diet at 16 wpff. The nutritional history/dietary regime is the main NP influencing factor, whereas environmental and host factors significantly impacted microbiota composition in M fish. Microbial metabolic reactions of amino acid metabolism were higher in M fish when compared to V fish at two wpff suggesting microbiota played a role in digesting the essential amino acids of M feed. The excessive mucin O-degradation revealed in V fish at two wpff was mitigated in later life stages after NP, suggesting physiological adaptability and tolerance to V diet. Future studies are required to explore more fully how the microbiota functionally contributes to the NP.
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Affiliation(s)
- Marwa Mamdouh Tawfik
- Scottish Fish Immunology Research Centre, School of Biological Sciences, University of Aberdeen, Aberdeen, AB24 2TZ, UK.
- Hydrobiology Department, Veterinary Research Institute, National Research Centre, Giza, 12622, Egypt.
| | - Marlene Lorgen-Ritchie
- Scottish Fish Immunology Research Centre, School of Biological Sciences, University of Aberdeen, Aberdeen, AB24 2TZ, UK
| | - Elżbieta Król
- Scottish Fish Immunology Research Centre, School of Biological Sciences, University of Aberdeen, Aberdeen, AB24 2TZ, UK
| | - Stuart McMillan
- Institute of Aquaculture, University of Stirling, Stirling, FK9 4LA, UK
| | | | - Daniel I Bolnick
- Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT, 06269-3043, USA
| | - Alex Douglas
- Scottish Fish Immunology Research Centre, School of Biological Sciences, University of Aberdeen, Aberdeen, AB24 2TZ, UK
| | - Douglas R Tocher
- Institute of Aquaculture, University of Stirling, Stirling, FK9 4LA, UK
- Guangdong Provincial Key Laboratory of Marine Biotechnology, Shantou University, Shantou, 515063, Guangdong, China
| | - Mónica B Betancor
- Institute of Aquaculture, University of Stirling, Stirling, FK9 4LA, UK
| | - Samuel A M Martin
- Scottish Fish Immunology Research Centre, School of Biological Sciences, University of Aberdeen, Aberdeen, AB24 2TZ, UK.
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Schwepe C, Wojno M, Molinari GS, Kwasek K. Effects of applying nutritional programming at different early stages of Largemouth bass (Micropterus salmoides, Lacepède) development on growth and dietary plant protein utilization. J Anim Physiol Anim Nutr (Berl) 2022; 106:1431-1443. [PMID: 36066244 DOI: 10.1111/jpn.13770] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2022] [Revised: 07/22/2022] [Accepted: 08/16/2022] [Indexed: 11/29/2022]
Abstract
Plant protein (PP) utilization in fish is limited due to lower digestibility compared to fishmeal (FM) and the presence of antinutritional factors. Its utilization can be improved by nutritional programming (NP), a method wherein a fish is provided a nutritional stimulus early in life which can alter their physiology. NP has been shown to be effective but methods of applying NP are varied and have been applied at different stages of development with different outcomes. To find the optimal timeframe to perform NP in fish early stages Largemouth bass (Micropterus salmoides, Lacepède) were nutritionally programmed at three different ages in early development. In this study bass were programmed with: (1) live food enriched with soybean meal (SBM) from 6 to 15 days post-hatch (dph) (NPL), (2) SBM-based formulated diet from 16 to 25 dph (NPD1) and (3) formulated SBM-diet from 26 to 35 dph (NPD2). After programming, each group was fed FM-diet before being refed SBM-diet from 100 to 172 dph. A positive control (PC) was fed FM-diet throughout. Final average body weight of PC was significantly higher than NPD1 and NPD2 but did not significantly differ from NPL. Overall NPL showed much improved growth and utilization of PP compared to NPD1 and was similar to growth achieved by PC. This study showed an optimum window of time exists wherein NP of Largemouth bass yields the best impact on growth in the larval stage and later in life when fed SBM-diet. Programming should be performed right after mouth opening using enriched live food and can result in growth similar to non-programmed fish fed FM-based diet. Programming effects similar to that of the live food approach can be achieved with formulated diet, however it is crucial that Largemouth bass are of a proper age and sufficiently developed when programmed with dry food or severe impacts on growth can occur.
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Affiliation(s)
- Connor Schwepe
- Center for Fisheries, Aquaculture, and Aquatic Sciences, Southern Illinois University, Carbondale, Illinois, USA
| | - Michal Wojno
- Center for Fisheries, Aquaculture, and Aquatic Sciences, Southern Illinois University, Carbondale, Illinois, USA
| | - Giovanni S Molinari
- Center for Fisheries, Aquaculture, and Aquatic Sciences, Southern Illinois University, Carbondale, Illinois, USA
| | - Karolina Kwasek
- Center for Fisheries, Aquaculture, and Aquatic Sciences, Southern Illinois University, Carbondale, Illinois, USA
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Kwasek K, Patula S, Wojno M, Oliaro F, Cabay C, Pinnell LJ. Does Exposure of Broodstock to Dietary Soybean Meal Affect Its Utilization in the Offspring of Zebrafish (Danio rerio)? Animals (Basel) 2022; 12:ani12121475. [PMID: 35739814 PMCID: PMC9219465 DOI: 10.3390/ani12121475] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2022] [Revised: 05/29/2022] [Accepted: 05/31/2022] [Indexed: 11/16/2022] Open
Abstract
Simple Summary Replacement of fishmeal in fish diets with plant protein has been an ongoing challenge. High-quality plant protein concentrates are widely used since their digestibility can be comparable to fishmeal. However, their price can exceed the cost of marine raw materials. Progress with utilization of lower-quality plant protein sources has been made but a number of concerns must be overcome to maintain acceptable growth rates at high fishmeal substitution levels. Nutritional programming represents a promising approach to offset the negative effects of dietary plant protein through its exposure in early life. We tested an unconventional programming strategy by exposing parental zebrafish to soybean meal diet to improve dietary soybean meal utilization in progeny fish. The study observed a strong trend showing better growth performance between progeny zebrafish fed soybean meal diet that originated from broodstock exposed to soybean meal as opposed to progeny fish fed soybean meal diet that originated from fishmeal diet fed broodstock. However, the study found no changes in the richness, diversity, or composition of gut microbial communities associated with progeny fish from fishmeal or soybean meal fed broodstock. Hence, the mechanism behind nutritional programming does not seem to be associated with modified gut microbiome. Abstract Nutritional programming (NP) is a concept in which early nutritional events alter the physiology of an animal and its response to different dietary regimes later in life. The objective of this study was to determine if NP via broodstock with dietary plant protein (PP) has any effect on the gut microbiome of the progeny fish and whether this modified gut microbiome leads to better utilization of PP diet. The experiment consisted of four different treatments as follows: (1) progeny that received FM diet obtained from fishmeal (FM)-fed broodstock (FMBS-FM, +control); (2) progeny that received PP diet obtained from FM-fed parents (FMBS-PP); (3) progeny that received PP diet obtained from “nutritionally programmed” parents (PPBS-PP; −control); and (4) progeny that received FM diet obtained from “nutritionally programmed” parents (PPBS-FM). Zebrafish was used as a model species. This study found that parental programming seems to have some positive effect on dietary PP utilization in progeny. However, the influence of NP with PP through broodstock on gut microbiota of the offspring fish was not detected.
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Affiliation(s)
- Karolina Kwasek
- Center for Fisheries, Aquaculture, and Aquatic Sciences, Southern Illinois University, 1125 Lincoln Dr. Life Science II, Room 251, Carbondale, IL 62901, USA; (S.P.); (M.W.)
- Correspondence: ; Tel.: +1-618-453-2890
| | - Samuel Patula
- Center for Fisheries, Aquaculture, and Aquatic Sciences, Southern Illinois University, 1125 Lincoln Dr. Life Science II, Room 251, Carbondale, IL 62901, USA; (S.P.); (M.W.)
| | - Michal Wojno
- Center for Fisheries, Aquaculture, and Aquatic Sciences, Southern Illinois University, 1125 Lincoln Dr. Life Science II, Room 251, Carbondale, IL 62901, USA; (S.P.); (M.W.)
| | - Frank Oliaro
- A. Watson Armour III Center for Animal Health and Welfare, John G. Shedd Aquarium, Chicago, IL 60605, USA; (F.O.); (C.C.)
| | - Chrissy Cabay
- A. Watson Armour III Center for Animal Health and Welfare, John G. Shedd Aquarium, Chicago, IL 60605, USA; (F.O.); (C.C.)
| | - Lee J. Pinnell
- Veterinary Education, Research, and Outreach Program, Texas A&M University, Canyon, TX 79015, USA;
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