1
|
Li W, Fu Y, Jiang Y, Hu J, Wei Y, Li H, Li J, Yang H, Wu Y. Synergistic Biocontrol and Growth Promotion in Strawberries by Co-Cultured Trichoderma harzianum TW21990 and Burkholderia vietnamiensis B418. J Fungi (Basel) 2024; 10:551. [PMID: 39194877 DOI: 10.3390/jof10080551] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2024] [Revised: 07/31/2024] [Accepted: 08/02/2024] [Indexed: 08/29/2024] Open
Abstract
This study aimed to investigate the efficiency of the secondary metabolites (SMs) produced by a co-culture of Trichoderma harzianum TW21990 and Burkholderia vietnamiensis B418 in the control of Colletotrichum siamense CM9. A fermentation filtrate of B418 + TW21990 co-culture (BT21) produced a notable increase in the inhibition rate of CM9 compared to those of TW21990 and B418 monocultures, which reached 91.40% and 80.46% on PDA plates and strawberry leaves, respectively. The BT21 fermentation broth exhibited high control efficiency on strawberry root rot of 68.95% in a pot experiment, which was higher than that in the monocultures and fluazinam treatment. In addition, BT21 treatment promoted strawberry root development, improved antioxidative enzyme activities in the leaves and roots, and enhanced the total chlorophyll content of the strawberry leaves. UHPLC-MS/MS analysis of fermentation filtrates was performed to elucidate SM variations, revealing 478 and 795 metabolites in BT21 co-culture in positive and negative ion modes, respectively. The metabolomic profiles suggested abundant SMs with antagonistic capabilities and growth-promoting effects: 3-(propan-2-yl)-octahydropyrrolo [1,2-a]pyrazine-1,4-dione (cyclo(L-Pro-L-Val)), 3-[(4-hydroxyphenyl)methyl]-octahydropyrrolo[1,2-a]pyrazine-1,4-dione (cyclo(L-Pro-L-Tyr)), 3-indoleacetic acid (IAA), 2-hydroxycinnamic acid, 4-aminobutyric acid (GABA), bafilomycin B1, and DL-indole-3-lactic acid (ILA) were significantly enhanced in the co-culture. Overall, this study demonstrates that a co-culture strategy is efficient for inducing bioactive SMs in T. harzianum and B. vietnamiensis, which could be exploited as a novel approach for developing biocontrol consortia.
Collapse
Affiliation(s)
- Wenzhe Li
- School of Bioengineering, Qilu University of Technology, Shandong Academy of Sciences, Jinan 250353, China
- Shandong Provincial Key Laboratory of Applied Microbiology, Ecology Institute, Qilu University of Technology, Shandong Academy of Sciences, Jinan 250103, China
| | - Yiting Fu
- School of Bioengineering, Qilu University of Technology, Shandong Academy of Sciences, Jinan 250353, China
- Shandong Provincial Key Laboratory of Applied Microbiology, Ecology Institute, Qilu University of Technology, Shandong Academy of Sciences, Jinan 250103, China
| | - Yanqing Jiang
- School of Bioengineering, Qilu University of Technology, Shandong Academy of Sciences, Jinan 250353, China
- Shandong Provincial Key Laboratory of Applied Microbiology, Ecology Institute, Qilu University of Technology, Shandong Academy of Sciences, Jinan 250103, China
| | - Jindong Hu
- Shandong Provincial Key Laboratory of Applied Microbiology, Ecology Institute, Qilu University of Technology, Shandong Academy of Sciences, Jinan 250103, China
| | - Yanli Wei
- Shandong Provincial Key Laboratory of Applied Microbiology, Ecology Institute, Qilu University of Technology, Shandong Academy of Sciences, Jinan 250103, China
| | - Hongmei Li
- Shandong Provincial Key Laboratory of Applied Microbiology, Ecology Institute, Qilu University of Technology, Shandong Academy of Sciences, Jinan 250103, China
| | - Jishun Li
- Shandong Provincial Key Laboratory of Applied Microbiology, Ecology Institute, Qilu University of Technology, Shandong Academy of Sciences, Jinan 250103, China
| | - Hetong Yang
- Shandong Provincial Key Laboratory of Applied Microbiology, Ecology Institute, Qilu University of Technology, Shandong Academy of Sciences, Jinan 250103, China
| | - Yuanzheng Wu
- Shandong Provincial Key Laboratory of Applied Microbiology, Ecology Institute, Qilu University of Technology, Shandong Academy of Sciences, Jinan 250103, China
| |
Collapse
|
2
|
Wang X, Zhao Z, Li H, Wei Y, Hu J, Yang H, Zhou Y, Li J. The growth-promoting and disease-suppressing mechanisms of Trichoderma inoculation on peanut seedlings. FRONTIERS IN PLANT SCIENCE 2024; 15:1414193. [PMID: 38984154 PMCID: PMC11231372 DOI: 10.3389/fpls.2024.1414193] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/08/2024] [Accepted: 06/05/2024] [Indexed: 07/11/2024]
Abstract
Trichoderma spp. is known for its ability to enhance plant growth and suppress disease, but the mechanisms for its interaction with host plants and pathogens remain unclear. This study investigated the transcriptomics and metabolomics of peanut plants (Arachis hypogaea L.) inoculated with Trichoderma harzianum QT20045, in the absence and presence of the stem rot pathogen Sclerotium rolfsii JN3011. Under the condition without pathogen stress, the peanut seedlings inoculated with QT20045 showed improved root length and plant weight, increased indole acetic acid (IAA) production, and reduced ethylene level, with more active 1-aminocyclopropane-1-carboxylate acid (ACC) synthase (ACS) and ACC oxidase (ACO), compared with the non-inoculated control. Under the pathogen stress, the biocontrol efficacy of QT20045 against S. rolfsii was 78.51%, with a similar effect on plant growth, and IAA and ethylene metabolisms to the condition with no biotic stress. Transcriptomic analysis of peanut root revealed that Trichoderma inoculation upregulated the expression of certain genes in the IAA family but downregulated the genes in the ACO family (AhACO1 and AhACO) and ACS family (AhACS3 and AhACS1) consistently in the absence and presence of pathogens. During pathogen stress, QT20045 inoculation leads to the downregulation of the genes in the pectinesterase family to keep the host plant's cell wall stable, along with upregulation of the AhSUMM2 gene to activate plant defense responses. In vitro antagonistic test confirmed that QT20045 suppressed S. rolfsii growth through mechanisms of mycelial entanglement, papillary protrusions, and decomposition. Our findings highlight that Trichoderma inoculation is a promising tool for sustainable agriculture, offering multiple benefits from pathogen control to enhanced plant growth and soil health.
Collapse
Affiliation(s)
- Xingqiang Wang
- Shandong Provincial Key Laboratory of Applied Microbiology, Ecology Institute of Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
- China-Australia Joint Laboratory for Soil Ecological Health and Remediation, Ecology Institute of Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Zhongjuan Zhao
- Shandong Provincial Key Laboratory of Applied Microbiology, Ecology Institute of Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
- China-Australia Joint Laboratory for Soil Ecological Health and Remediation, Ecology Institute of Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Hongmei Li
- Shandong Provincial Key Laboratory of Applied Microbiology, Ecology Institute of Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
- China-Australia Joint Laboratory for Soil Ecological Health and Remediation, Ecology Institute of Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Yanli Wei
- Shandong Provincial Key Laboratory of Applied Microbiology, Ecology Institute of Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
- China-Australia Joint Laboratory for Soil Ecological Health and Remediation, Ecology Institute of Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Jindong Hu
- Shandong Provincial Key Laboratory of Applied Microbiology, Ecology Institute of Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
- China-Australia Joint Laboratory for Soil Ecological Health and Remediation, Ecology Institute of Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Han Yang
- Shandong Provincial Key Laboratory of Applied Microbiology, Ecology Institute of Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
- China-Australia Joint Laboratory for Soil Ecological Health and Remediation, Ecology Institute of Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Yi Zhou
- China-Australia Joint Laboratory for Soil Ecological Health and Remediation, Ecology Institute of Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
- School of Agriculture, Food and Wine, The University of Adelaide, Urrbrae, SA, Australia
| | - Jishun Li
- Shandong Provincial Key Laboratory of Applied Microbiology, Ecology Institute of Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
- China-Australia Joint Laboratory for Soil Ecological Health and Remediation, Ecology Institute of Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| |
Collapse
|
3
|
Zhao LT, Wang BN, Zhang YQ, Zhang C, Liu M, Chen AL, Yuan J, Chen J, Zhou S. Design, Synthesis, Nematicidal, and Fungicidal Activities of Novel Azo and Azoxy Compounds. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2024; 72:2473-2481. [PMID: 38284538 DOI: 10.1021/acs.jafc.3c04847] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/30/2024]
Abstract
Bursaphelenchus xylophilus (B. xylophilus) and Meloidogyne are parasitic nematodes that have caused severe ecological and economic damage in pinewood and crops, respectively. Jietacins (jietacin A and B) were found to have excellent biological activity against B. xylophilus. Based on our tremendous demand for chemicals against B. xylophilus, a novel scaffold based on the azo and azoxy groups was designed, and a series of compounds were synthesized. In the bioassay, Ia, IIa, IIc, IId, and IVa exhibited higher activity against B. xylophilus in vitro than avermectin (LC50 = 2.43 μg·mL-1) with LC50 values of 1.37, 1.12, 0.889, 1.56, and 1.10 μg·mL-1, respectively. Meanwhile, Ib, Ic, IIc, and IVa showed good inhibition effects against Meloidogyne in vivo at the concentrations of 80 and 40 μg·mL-1 with inhibition rates of 89.0% and 81.6%, 95.6% and 75.7%, 96.3% and 41.2%, and 86.8% and 78.7%, respectively. In fungicidal activity in vitro, IIb and IVa exhibited excellent effect against Botryosphaeria dothidea with the inhibition of 82.59% and 85.32% at the concentration of 10 μg·mL-1, while the inhibition of Ia was 83.16% against Rhizoctonia solani at the concentration of 12.5 μg·mL-1. Referring to the biological activity against B. xylophilus, a 3D-QASR model was built in which the electron-donating group and small group at the 4-phenylhydrazine were favorable for the activity. In general, the novel azoxy compounds, especially IIc possess great potential for application in the prevention of B. xylophilus.
Collapse
Affiliation(s)
- Lyu-Ting Zhao
- Collaborative Innovation Center of Green Pesticide, National Joint Engineering Laboratory of Biopesticide Preparation, Zhejiang A&F University State Key Laboratory of Subtropical Silviculture, School of Forestry and Biotechnology, Zhejiang A & F University, Hangzhou, Zhejiang 311300, China
| | - Bo-Ning Wang
- Collaborative Innovation Center of Green Pesticide, National Joint Engineering Laboratory of Biopesticide Preparation, Zhejiang A&F University State Key Laboratory of Subtropical Silviculture, School of Forestry and Biotechnology, Zhejiang A & F University, Hangzhou, Zhejiang 311300, China
| | - Yu-Qi Zhang
- Collaborative Innovation Center of Green Pesticide, National Joint Engineering Laboratory of Biopesticide Preparation, Zhejiang A&F University State Key Laboratory of Subtropical Silviculture, School of Forestry and Biotechnology, Zhejiang A & F University, Hangzhou, Zhejiang 311300, China
| | - Chuang Zhang
- Collaborative Innovation Center of Green Pesticide, National Joint Engineering Laboratory of Biopesticide Preparation, Zhejiang A&F University State Key Laboratory of Subtropical Silviculture, School of Forestry and Biotechnology, Zhejiang A & F University, Hangzhou, Zhejiang 311300, China
| | - Ming Liu
- School of Pharmacy, Binzhou Medical University, Yantai, Shandong 264003, China
| | - An-Liang Chen
- Collaborative Innovation Center of Green Pesticide, National Joint Engineering Laboratory of Biopesticide Preparation, Zhejiang A&F University State Key Laboratory of Subtropical Silviculture, School of Forestry and Biotechnology, Zhejiang A & F University, Hangzhou, Zhejiang 311300, China
| | - Jing Yuan
- Collaborative Innovation Center of Green Pesticide, National Joint Engineering Laboratory of Biopesticide Preparation, Zhejiang A&F University State Key Laboratory of Subtropical Silviculture, School of Forestry and Biotechnology, Zhejiang A & F University, Hangzhou, Zhejiang 311300, China
| | - Jie Chen
- Collaborative Innovation Center of Green Pesticide, National Joint Engineering Laboratory of Biopesticide Preparation, Zhejiang A&F University State Key Laboratory of Subtropical Silviculture, School of Forestry and Biotechnology, Zhejiang A & F University, Hangzhou, Zhejiang 311300, China
| | - Sha Zhou
- Collaborative Innovation Center of Green Pesticide, National Joint Engineering Laboratory of Biopesticide Preparation, Zhejiang A&F University State Key Laboratory of Subtropical Silviculture, School of Forestry and Biotechnology, Zhejiang A & F University, Hangzhou, Zhejiang 311300, China
| |
Collapse
|
4
|
Wang Y, Long C, Yin L, Liu R, Liao Y, He G, Liu Z. Effects of simulated acid rain on hydrochemical factors and microbial community structure in red soil aquifers. RSC Adv 2024; 14:4482-4491. [PMID: 38312729 PMCID: PMC10835706 DOI: 10.1039/d3ra08820k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2023] [Accepted: 01/18/2024] [Indexed: 02/06/2024] Open
Abstract
Acid rain can lower the pH of groundwater and affect its hydrogeochemistry and microbial ecology. However, the effects of acid rain on the hydrogeochemistry and microbial ecology of red soil groundwater systems in southern China are poorly understood. Previous research had mainly investigated the sources and patterns of groundwater acidification, but not the microbial mechanisms that contribute to this process and their associations with hydrochemical factors. To address this knowledge gap, we conducted a soil column experiment to simulate the infiltration of acid rain through various filter materials (coarse, medium, and fine sand) and to examine the hydrochemical and microbial features of the infiltrate, which can reveal how simulated acid rain (pH 3.5-7.0) alters the hydrochemistry and microbial community composition in red soil aquifers. The results showed that the pH of the leachate decreased due to simulated acid rain, and that the leaching efficiency of nitrogen and metal ions was influenced by the particle size of the filter media. Illumina 16S rRNA gene sequencing revealed that the leachate was dominated by Proteobacteria, Patescibacteria, Actinobacteria, and Acidobacteria, with Proteobacteria accounting for 67.04-74.69% of the bacterial community and containing a high proportion of nitrifying and denitrifying bacteria. Additionally, several genera with heavy metal tolerance, such as Burkholderia-Caballeronia-Paraburkholderia, Delftia, Methylversatilis, Aquicella, and Ralstonia, were widely distributed in the leachate, indicating the strong adaptive capacity of the microbial population. A correlation analysis between the hydrochemical factors and the microbial community structure revealed that pH was the most influential factor, followed by NO2--N, Fe, Al, Cu, Mn, and others. These results indicate that acidification modifies the hydrochemical conditions of the aquifer, creating an environment that is unfavorable for microbial growth and survival. However, some microorganisms may acquire resistance genes to cope with environmental changes.
Collapse
Affiliation(s)
- Yian Wang
- School of Life Science, Jinggangshan University Ji'an Jiangxi China
| | - Chao Long
- School of Civil and Surveying & Mapping Engineering, Jiangxi University of Science and Technology Ganzhou Jiangxi China
| | - Li Yin
- School of Life Science, Jinggangshan University Ji'an Jiangxi China
| | - Renlu Liu
- School of Life Science, Jinggangshan University Ji'an Jiangxi China
| | - Yonghui Liao
- School of Life Science, Jinggangshan University Ji'an Jiangxi China
| | - Genhe He
- School of Life Science, Jinggangshan University Ji'an Jiangxi China
| | - Zuwen Liu
- School of Life Science, Jinggangshan University Ji'an Jiangxi China
- School of Civil and Surveying & Mapping Engineering, Jiangxi University of Science and Technology Ganzhou Jiangxi China
- School of Hydraulic & Ecological Engineering, Nanchang Institute of Technology Nanchang China
| |
Collapse
|
5
|
Kamalanathan V, Sevugapperumal N, Nallusamy S, Ashraf S, Kailasam K, Afzal M. Metagenomic Approach Deciphers the Role of Community Composition of Mycobiome Structured by Bacillus velezensis VB7 and Trichoderma koningiopsis TK in Tomato Rhizosphere to Suppress Root-Knot Nematode Infecting Tomato. Microorganisms 2023; 11:2467. [PMID: 37894125 PMCID: PMC10609121 DOI: 10.3390/microorganisms11102467] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2023] [Revised: 09/27/2023] [Accepted: 09/27/2023] [Indexed: 10/29/2023] Open
Abstract
The soil microbiome is crucial for maintaining the sustainability of the agricultural environment. Concerning the role of diverse mycobiomes and their abundance toward the suppression of root-knot nematode (RKN) infection in vegetable crops, our understanding is unclear. To unveil this issue, we examined the fungal microbiome in tomato rhizosphere augmented with bioagents challenged against RKN at taxonomic and functional levels. Composition of the mycobiome in tomato rhizosphere treated with Bacillus velezensis VB7 and Trichoderma koningiopsis TK differed significantly from the infected tomato rhizosphere. The abundance and diversity of fungal species, however, were significantly higher in the combined treatments of bioagents than for individual treatments. Fungal microbiome diversity was negatively correlated in the RKN-associated soil. Network analysis of the fungal biome indicated a larger and complex network of fungal biome diversity in bioagent-treated soil than in nematode-associated tomato rhizosphere. The diversity index represented by that challenging the RKN by drenching with consortia of B. velezensis VB7 and T. koningiopsis TK, or applying them individually, constituted the maximum abundance and richness of the mycobiome compared to the untreated control. Thus, the increased diverse nature and relative abundance of the mycobiome in tomato rhizosphere was mediated through the application of either T. koningiopsis TK or B. velezensis VB7, individually or as a consortium comprising both fungal and bacterial antagonists, which facilitated engineering the community composition of fungal bioagents. This in turn inhibited the infestation of RKN in tomato. It would be interesting to explore further the possibility of combined applications of B. velezensis VB7 and T. koningiopsis TK to manage root-knot nematodes as an integrated approach for managing plant parasitic nematodes at the field level.
Collapse
Affiliation(s)
- Vinothini Kamalanathan
- Department of Plant Pathology, Centre for Plant Protection Studies, Tamil Nadu Agricultural University, Coimbatore 641003, Tamil Nadu, India;
| | - Nakkeeran Sevugapperumal
- Department of Plant Pathology, Centre for Plant Protection Studies, Tamil Nadu Agricultural University, Coimbatore 641003, Tamil Nadu, India;
| | - Saranya Nallusamy
- Department of Plant Molecular Biology and Bioinformatics, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore 641003, Tamil Nadu, India;
| | - Suhail Ashraf
- Department of Plant Biotechnology, Tamil Nadu Agricultural University, Coimbatore 641003, Tamil Nadu, India;
| | - Kumanan Kailasam
- Department of Horticulture, Agricultural College & Research Institute, Kudumiyanmalai, TNAU, Pudukottai 622104, Tamil Nadu, India;
| | - Mohd Afzal
- Department of Chemistry, College of Science, King Saud University, Riyadh 11451, Saudi Arabia;
| |
Collapse
|
6
|
Inácio ML, Faria JMS, Haukeland S. Editorial: Novel approaches for sustainable crop yield and management of plant-parasitic nematodes. FRONTIERS IN PLANT SCIENCE 2023; 14:1274757. [PMID: 37711305 PMCID: PMC10498114 DOI: 10.3389/fpls.2023.1274757] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/08/2023] [Accepted: 08/22/2023] [Indexed: 09/16/2023]
Affiliation(s)
- Maria L. Inácio
- INIAV, I.P., National Institute for Agrarian and Veterinary Research, Oeiras, Portugal
- GREEN-IT Bioresources for Sustainability, Instituto de Tecnologia Química e Biológica, Universidade Nova de Lisboa (ITQB NOVA), Oeiras, Portugal
| | - Jorge M. S. Faria
- INIAV, I.P., National Institute for Agrarian and Veterinary Research, Oeiras, Portugal
- MED, Mediterranean Institute for Agriculture, Environment and Development & CHANGE—Global Change and Sustainability Institute, Institute for Advanced Studies and Research, Évora University, Évora, Portugal
| | - Solveig Haukeland
- Plant Health Theme, ICIPE, International Centre of Insect Physiology and Ecology, Nairobi, Kenya
- Division of Biotechnology and Plant Health, NIBIO, Norwegian Institute for Bioeconomy Research, Ås, Norway
| |
Collapse
|
7
|
Kim JH, Lee BM, Kang MK, Park DJ, Choi IS, Park HY, Lim CH, Son KH. Assessment of nematicidal and plant growth-promoting effects of Burkholderia sp. JB-2 in root-knot nematode-infested soil. FRONTIERS IN PLANT SCIENCE 2023; 14:1216031. [PMID: 37538060 PMCID: PMC10394650 DOI: 10.3389/fpls.2023.1216031] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/03/2023] [Accepted: 06/26/2023] [Indexed: 08/05/2023]
Abstract
Root-knot nematodes (RKN), Meloidogyne spp., are plant-parasitic nematodes that are responsible for considerable economic losses worldwide, because of the damage they cause to numerous plant species and the inadequate biological agents available to combat them. Therefore, developing novel and eco-friendly nematicides is necessary. In the present study, Burkholderia sp. JB-2, isolated from RKN-infested rhizosphere soil in South Korea, was evaluated to determine its nematicidal and plant growth-promoting effects under in vitro and in vivo conditions. Cell-free filtrates of the JB-2 strain showed high levels of nematicidal activity against second-stage juveniles (J2) of M. incognita, with 87.5% mortality following two days of treatment. In addition, the assessment of the activity against other six plant parasitic nematodes (M. javanica, M. hapla, M. arenaria, Ditylenchus destructor, Aphelenchoides subtenuis, and Heterodera trifolii) showed that the cell-free filtrates have a broad nematicidal spectrum. The three defense-responsive (MiMIF-2, MiDaf16-like1, and MiSkn1-like1) genes were activated, while Mi-cm-3 was downregulated when treated with cell-free filtrates of JB-2 cultures on J2. The greenhouse experiments suggested that the cell-free filtrates of the JB-2 strain efficiently controlled the nematode population in soil and egg mass formations of M. incognita in tomato (Solanum lycopersicum L., cv. Rutgers). An improvement in the host plant growth was observed, in which the shoot length and fresh weights of shoots and roots increased. The treatment with 10% of JB-2 cell-free filtrates significantly upregulated the expression levels of plant defenses (SlPR1, SlPR5, and SlPAL) and growth-promoting (ACO1, Exp18, and SlIAA1) genes compared with the corresponding parameters of the control group. Therefore, JB-2 could be a promising candidate for the sustainable management of RKN.
Collapse
Affiliation(s)
- Jong-Hoon Kim
- Microbiome Convergence Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea
| | - Byeong-Min Lee
- Microbiome Convergence Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea
- Department of Bio-Environmental Chemistry, College of Agriculture and Life Science, Chungnam National University, Daejeon, Republic of Korea
| | - Min-Kyoung Kang
- Microbiome Convergence Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea
| | - Dong-Jin Park
- Microbiome Convergence Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea
| | - In-Soo Choi
- Nematode Research Center, Life and Industry Convergence Research Institute, Pusan National University, Miryang, Republic of Korea
| | - Ho-Yong Park
- Microbiome Convergence Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea
| | - Chi-Hwan Lim
- Department of Bio-Environmental Chemistry, College of Agriculture and Life Science, Chungnam National University, Daejeon, Republic of Korea
| | - Kwang-Hee Son
- Microbiome Convergence Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea
| |
Collapse
|
8
|
Kour D, Kour H, Khan SS, Khan RT, Bhardwaj M, Kailoo S, Kumari C, Rasool S, Yadav AN, Sharma YP. Biodiversity and Functional Attributes of Rhizospheric Microbiomes: Potential Tools for Sustainable Agriculture. Curr Microbiol 2023; 80:192. [PMID: 37101055 DOI: 10.1007/s00284-023-03300-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2022] [Accepted: 04/11/2023] [Indexed: 04/28/2023]
Abstract
The quest for increasing agricultural yield due to increasing population pressure and demands for healthy food has inevitably led to the indiscriminate use of chemical fertilizers. On the contrary, the exposure of the crops to abiotic stress and biotic stress interferes with crop growth further hindering the productivity. Sustainable agricultural practices are of major importance to enhance production and feed the rising population. The use of plant growth promoting (PGP) rhizospheric microbes is emerging as an efficient approach to ameliorate global dependence on chemicals, improve stress tolerance of plants, boost up growth and ensure food security. Rhizosphere associated microbiomes promote the growth by enhancing the uptake of the nutrients, producing plant growth regulators, iron chelating complexes, shaping the root system under stress conditions and decreasing the levels of inhibitory ethylene concentrations and protecting plants from oxidative stress. Plant growth-promoting rhizospheric microbes belong to diverse range of genera including Acinetobacter, Achromobacter, Aspergillus, Bacillus, Burkholderia, Flavobacterium, Klebsiella, Micrococcus, Penicillium, Pseudomonas, Serratia and Trichoderma. Plant growth promoting microbes are an interesting aspect of research for scientific community and a number of formulations of beneficial microbes are also commercially available. Thus, recent progress in our understanding on rhizospheric microbiomes along with their major roles and mechanisms of action under natural and stressful conditions should facilitate their application as a reliable component in the management of sustainable agricultural system. This review highlights the diversity of plant growth promoting rhizospheric microbes, their mechanisms of plant growth promotion, their role under biotic and abiotic stress and status of biofertilizers. The article further focuses on the role of omics approaches in plant growth promoting rhizospheric microbes and draft genome of PGP microbes.
Collapse
Affiliation(s)
- Divjot Kour
- Department of Microbiology, Akal College of Basic Sciences, Eternal University, Baru Sahib, Sirmaur, 173101, Himachal Pradesh, India
| | - Harpreet Kour
- Department of Botany, University of Jammu, Jammu, 180006, Jammu and Kashmir, India
| | - Sofia Shareif Khan
- Department of Biotechnology, Shri Mata Vaishno Devi University, Katra, 182320, Jammu and Kashmir, India
| | - Rabiya Tabbassum Khan
- Department of Biotechnology, Shri Mata Vaishno Devi University, Katra, 182320, Jammu and Kashmir, India
| | - Mansavi Bhardwaj
- Department of Biotechnology, Shri Mata Vaishno Devi University, Katra, 182320, Jammu and Kashmir, India
| | - Swadha Kailoo
- Department of Biotechnology, Shri Mata Vaishno Devi University, Katra, 182320, Jammu and Kashmir, India
| | - Chandresh Kumari
- Faculty of Applied Sciences and Biotechnology, Shoolini University, Vill-Bhajhol Solan, 173229, Himachal Pradesh, India
| | - Shafaq Rasool
- Department of Biotechnology, Shri Mata Vaishno Devi University, Katra, 182320, Jammu and Kashmir, India
| | - Ajar Nath Yadav
- Department of Biotechnology, Dr. Khem Singh Gill Akal College of Agriculture, Eternal University, Baru Sahib, Sirmaur, 173101, Himachal Pradesh, India.
- INTI International University, Persiaran Perdana BBN Putra Nilai, 71800, Nilai, Negeri Sembilan, Malaysia.
| | - Yash Pal Sharma
- Department of Botany, University of Jammu, Jammu, 180006, Jammu and Kashmir, India
| |
Collapse
|
9
|
Rios-Ruiz WF, Tuanama-Reátegui C, Huamán-Córdova G, Valdez-Nuñez RA. Co-Inoculation of Endophytes Bacillus siamensis TUR07-02b and Priestia megaterium SMBH14-02 Promotes Growth in Rice with Low Doses of Nitrogen Fertilizer. PLANTS (BASEL, SWITZERLAND) 2023; 12:524. [PMID: 36771609 PMCID: PMC9919783 DOI: 10.3390/plants12030524] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/04/2022] [Revised: 12/30/2022] [Accepted: 01/04/2023] [Indexed: 06/18/2023]
Abstract
Multiple biotic and abiotic factors influence rice cultivation. These factors limit productivity and yield, as well as an irrational use of agrochemicals in rice cultivation. A sustainable alternative is using selected growth-promoting microorganisms to increase nutritional efficiency. In the present study, the direct mechanisms of growth promotion in two strains of Bacillus, three strains of Priestia, and two strains of Burkholderia endophytes of rice were characterized. Bacillus siamensis TUR07-02b and Priestia megaterium SMBH14-02 were selected to promote Oryza sativa var's growth. "Bellavista" was used at different doses (50, 75, and 100%) of mineral nitrogen (N) using a randomized block design by quintuplicate. Both strains, SMBH14-02 and TUR07-02b, presented outstanding promoter characteristics, including auxin production (123.17 and 335.65 μg mL-1, respectively) and biological nitrogen fixation capacity. Similarly, B. siamensis TUR07-02b could solubilize phosphate-Ca (20.94 μg mL-1), cellulases, and pectinases. Under greenhouse conditions, co-inoculated plants receiving 75% of the total dose of mineral nitrogen showed increased agronomic parameters in relation to panicle length, grains per panicle, grain yield, and harvest index by 25.0, 30.7, 39.5, and 12.5%, respectively, compared to the 75% fertilized treatment without inoculation. The strains of B. siamensis TUR07-02b and P. megaterium SMBH14-02 are potential microbial resources in the formulation of new inoculants to reduce the use of nitrogenous fertilizers. Thus, agronomic validation of the inoculant consortium at the field level will be an essential step in providing an alternative for the sustainable management of rice cultivation and increased productivity of rice farmers in the San Martín region.
Collapse
Affiliation(s)
- Winston Franz Rios-Ruiz
- Laboratorio de Microbiología Agrícola, Departamento Académico Agrosilvopastoril, Facultad de Ciencias Agrarias, Universidad Nacional de San Martín, Tarapoto 22202, Perú
| | - Ciceron Tuanama-Reátegui
- Laboratorio de Microbiología Agrícola, Departamento Académico Agrosilvopastoril, Facultad de Ciencias Agrarias, Universidad Nacional de San Martín, Tarapoto 22202, Perú
| | - Gamaniel Huamán-Córdova
- Laboratorio de Microbiología Agrícola, Departamento Académico Agrosilvopastoril, Facultad de Ciencias Agrarias, Universidad Nacional de San Martín, Tarapoto 22202, Perú
| | - Renzo Alfredo Valdez-Nuñez
- Departamento Académico de Ciencias Básicas, Facultad de Ingeniería, Universidad Nacional de Barranca, Barranca 15169, Perú
| |
Collapse
|