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For: Breen EJ, MacLeod IM, Ho PN, Haile-Mariam M, Pryce JE, Thomas CD, Daetwyler HD, Goddard ME. BayesR3 enables fast MCMC blocked processing for largescale multi-trait genomic prediction and QTN mapping analysis. Commun Biol 2022;5:661. [PMID: 35790806 PMCID: PMC9256732 DOI: 10.1038/s42003-022-03624-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2021] [Accepted: 06/22/2022] [Indexed: 01/26/2023]  Open
Number Cited by Other Article(s)
1
Joukhadar R, Li Y, Thistlethwaite R, Forrest KL, Tibbits JF, Trethowan R, Hayden MJ. Optimising desired gain indices to maximise selection response. FRONTIERS IN PLANT SCIENCE 2024;15:1337388. [PMID: 38978519 PMCID: PMC11228337 DOI: 10.3389/fpls.2024.1337388] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/13/2023] [Accepted: 05/23/2024] [Indexed: 07/10/2024]
2
Gebremedhin A, Li Y, Shunmugam ASK, Sudheesh S, Valipour-Kahrood H, Hayden MJ, Rosewarne GM, Kaur S. Genomic selection for target traits in the Australian lentil breeding program. FRONTIERS IN PLANT SCIENCE 2024;14:1284781. [PMID: 38235201 PMCID: PMC10791954 DOI: 10.3389/fpls.2023.1284781] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/29/2023] [Accepted: 12/07/2023] [Indexed: 01/19/2024]
3
Xiang R, Fang L, Liu S, Macleod IM, Liu Z, Breen EJ, Gao Y, Liu GE, Tenesa A, Mason BA, Chamberlain AJ, Wray NR, Goddard ME. Gene expression and RNA splicing explain large proportions of the heritability for complex traits in cattle. CELL GENOMICS 2023;3:100385. [PMID: 37868035 PMCID: PMC10589627 DOI: 10.1016/j.xgen.2023.100385] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/08/2022] [Revised: 08/10/2022] [Accepted: 07/26/2023] [Indexed: 10/24/2023]
4
Zhao T, Cheng H. Interpreting single-step genomic evaluation as a neural network of three layers: pedigree, genotypes, and phenotypes. Genet Sel Evol 2023;55:68. [PMID: 37789273 PMCID: PMC10546757 DOI: 10.1186/s12711-023-00838-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2022] [Accepted: 09/08/2023] [Indexed: 10/05/2023]  Open
5
An Improved Bayesian Shrinkage Regression Algorithm for Genomic Selection. Genes (Basel) 2022;13:genes13122193. [PMID: 36553460 PMCID: PMC9778053 DOI: 10.3390/genes13122193] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2022] [Revised: 11/14/2022] [Accepted: 11/18/2022] [Indexed: 11/25/2022]  Open
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