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Zhang M, Wang C, Bai H, Deng W. A Contribution to the Phylogeny and Taxonomy of Hydnum (Cantharellales, Basidiomycota) from China. J Fungi (Basel) 2024; 10:98. [PMID: 38392770 PMCID: PMC10889965 DOI: 10.3390/jof10020098] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2023] [Revised: 01/21/2024] [Accepted: 01/22/2024] [Indexed: 02/24/2024] Open
Abstract
Hydnum is a well-characterized genus in the family Hydnaceae of Cantharellales and is characterized by spinose hymenophores. In this study, an ITS phylogenetic overview and a multilocus (ITS-nrLSU-tef1) phylogenetic tree of Hydnum were carried out. On the basis of morphological characteristics and phylogenetic results, seven species from China were confirmed, described, illustrated, and compared with similar species, including three new species, i.e., H. longipes, H. microcarpum, and H. sinorepandum, and four known species, i.e., H. cremeoalbum, H. melitosarxm, H. orientalbidum, and H. pinicola were recorded for the first time in China. A key to the species of Hydnum in China was provided.
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Affiliation(s)
- Ming Zhang
- Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, State Key Laboratory of Applied Microbiology Southern China, Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou 510070, China
| | - Chaoqun Wang
- Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, State Key Laboratory of Applied Microbiology Southern China, Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou 510070, China
| | - Hongfen Bai
- Chuxiong Yi Autonomous Prefecture Forestry and Grassland Science Research Institute, Chuxiong 675000, China
| | - Wangqiu Deng
- Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, State Key Laboratory of Applied Microbiology Southern China, Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou 510070, China
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Kudryavtseva AA, Novoyatlova US, Chuyko A, Gaeva DR, Vlasov AV, Manukhov IV. Disjunct habitat of cryptic Terebellides (Annelida, Trichobranchidae) species shows a phylogenetic link between polychaetes from the White and the North Seas. Sci Rep 2023; 13:22926. [PMID: 38129466 PMCID: PMC10739723 DOI: 10.1038/s41598-023-49785-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2023] [Accepted: 12/12/2023] [Indexed: 12/23/2023] Open
Abstract
Understanding the distribution and biodiversity of marine species is crucial for developing effective conservation strategies and maintaining the health of global ecosystems. Advancements in molecular data utilization have significantly improved our understanding of biodiversity within the genus Terebellides. In this study, we conducted a phylogenetic analysis on polychaete samples from the Kandalaksha Bay, White Sea, revealing their affiliation with a putative undescribed species of the genus Terebellides found in two locations of the North Sea. Interestingly, this species was not detected in the Norwegian and Barents Seas, leading us to propose a disjunct distribution scenario for this Terebellides species. This unique distribution pattern might be attributed to the succession of polychaetes by new species, facilitated by the Gulf Stream and a climate change role in driving shifts in species' ranges and altering marine ecosystem dynamics.
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Affiliation(s)
- A A Kudryavtseva
- Moscow Institute of Physics and Technology, 141701, Dolgoprudny, Russia
- Laboratory of Microbiology, BIOTECH University, 125080, Moscow, Russia
| | - U S Novoyatlova
- Moscow Institute of Physics and Technology, 141701, Dolgoprudny, Russia
- Laboratory of Microbiology, BIOTECH University, 125080, Moscow, Russia
| | - A Chuyko
- Moscow Institute of Physics and Technology, 141701, Dolgoprudny, Russia
| | - D R Gaeva
- Shirshov Institute of Oceanology, Russian Academy of Sciences, Moscow, Russia
| | - A V Vlasov
- Moscow Institute of Physics and Technology, 141701, Dolgoprudny, Russia
- Laboratory of Microbiology, BIOTECH University, 125080, Moscow, Russia
- Joint Institute for Nuclear Research, 141980, Dubna, Russia
| | - I V Manukhov
- Moscow Institute of Physics and Technology, 141701, Dolgoprudny, Russia.
- Laboratory of Microbiology, BIOTECH University, 125080, Moscow, Russia.
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Márquez-Sanz R, Gorjón SP, Salcedo I, Olariaga I. Hydnum pallidum Raddi, the Correct Name for H. albidum Peck in the Sense of European Authors and the Recently Described H. reginae Kibby, Liimat. & Niskanen. J Fungi (Basel) 2023; 9:1141. [PMID: 38132742 PMCID: PMC10744077 DOI: 10.3390/jof9121141] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2023] [Revised: 11/18/2023] [Accepted: 11/21/2023] [Indexed: 12/23/2023] Open
Abstract
The systematics of the genus Hydnum have undergone important advances, and many new species have been described with the aid of molecular data. A revision of old names that refer to Hydnum s. str., considering the knowledge now available, might reveal prioritary names of recently described species. This study focuses on the study of names that refer to white Hydnum in Europe, among which earlier synonyms of Hydnum reginae (=Hydnum albidum s. auct. pl. eur.) are potentially found, a species characterized by producing white basidiomata and smaller spores than any other European species. Our revision revealed the existence of three earlier names based on European material, namely H. pallidum Raddi, H. album Fr. and H. heimii Maas Geest. The earliest of those, Hydnum pallidum, is epitypified using material from Tuscany (Italy), from where it was originally described, and hence, it becomes the correct name for H. albidum s. auct. pl. eur. A full description and photographs of H. pallidum are provided, and further comments on other names that refer to white Hydnum based on European material are made.
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Affiliation(s)
- Rodrigo Márquez-Sanz
- Biology and Geology, Physics and Inorganic Chemistry Department, Rey Juan Carlos University, C/Tulipán s/n, 28933 Móstoles, Spain;
| | - Sergio Pérez Gorjón
- Department of Botany and Plant Physiology, Faculty of Biology, Plant DNA-Biobank, University of Salamanca. C/Licenciado Méndez Nieto s/n, 37007 Salamanca, Spain;
| | - Isabel Salcedo
- Department of Plant Biology and Ecology (Botany), University of the Basque Country (UPV/EHU), Apdo 644, 48080 Bilbao, Spain;
| | - Ibai Olariaga
- Biology and Geology, Physics and Inorganic Chemistry Department, Rey Juan Carlos University, C/Tulipán s/n, 28933 Móstoles, Spain;
- Aranzadi Society of Sciences, Mycology Section, Zorroagagaina 11, 20014 Donostia-San Sebastián, Spain
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Kim JS, Lee W, Kim C, Park H, Kim CS, Lim YW. Unveiling the Diversity of Hydnum in the Republic of Korea with One New Species, Hydnum paucispinum. MYCOBIOLOGY 2023; 51:300-312. [PMID: 37929003 PMCID: PMC10621273 DOI: 10.1080/12298093.2023.2265137] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/12/2023] [Accepted: 09/26/2023] [Indexed: 11/07/2023]
Abstract
Hydnum is a genus of ectomycorrhizal fungi belonging to the Hydnaceae family. It is widely distributed across different regions of the world, including North America, Europe, and Asia; however, some of them showed disjunct distributions. In recent years, with the integration of molecular techniques, the taxonomy and classification of Hydnum have undergone several revisions and advancements. However, these changes have not yet been applied in the Republic of Korea. In this study, we conducted an integrated analysis combining the morphological and molecular analyses of 30 specimens collected over a period of approximately 10 years in the Republic of Korea. For molecular analysis, the sequence data of the internal transcribed spacer (ITS) region, the large subunit of nuclear ribosomal RNA gene (nrLSU), and a portion of translation elongation factor 1-α (TEF1) were employed as molecular markers. Through this study, we identified eight species that had previously not been reported to occur in the Republic of Korea, including one new species, Hydnum paucispinum. A taxonomic key and detailed descriptions of the eight Hydnum species are provided in this study.
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Affiliation(s)
- Ji Seon Kim
- School of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul, Korea
| | - Wonjun Lee
- School of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul, Korea
| | - Changmu Kim
- Species Diversity Research Division, National Institute of Biological Resources, Incheon, Korea
| | - Hanna Park
- School of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul, Korea
| | - Chang Sun Kim
- Forest Biodiversity Division, Korea National Arboretum, Pocheon-si, Korea
| | - Young Woon Lim
- School of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul, Korea
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Justo A, Hood A, Swenie R, Matheny P. Hydnum atlanticum, a new species from Eastern North America. Fungal Syst Evol 2023; 11:63-70. [PMID: 38516386 PMCID: PMC10956580 DOI: 10.3114/fuse.2023.11.05] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2023] [Accepted: 03/13/2023] [Indexed: 03/23/2024] Open
Abstract
A new species of Hydnum subgenus Rufescentia is described based on collections made in Canada (New Brunswick, Newfoundland and Labrador) and the USA (New York). The new species is found in conifer dominated forests (e.g. Abies, Picea) and occurs in bryophyte-covered (Sphagnum, Bazzania) soil. It differs from the ecologically similar H. quebecense in the duller brown colors of the basidiomes, the smaller basidiospores and the basidia predominantly with three or four sterigmata. Phylogenetic analysis of the ITS region place H. subconnatum and H. oregonense as the closest relatives of H. atlanticum, but these taxa differ in the larger basidiospores, number of sterigmata per basidium, caespitose growth and/or geographic distribution. Citation: Justo A, Hood AW, Swenie RA, Matheny PB (2023). Hydnum atlanticum, a new species from Eastern North America. Fungal Systematics and Evolution 11: 63-70. doi: 10.3114/fuse.2023.11.05.
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Affiliation(s)
- A. Justo
- Department of Natural History, New Brunswick Museum, Saint John, New Brunswick, E2K 1E5, Canada
| | - A.W. Hood
- Department of Natural History, New Brunswick Museum, Saint John, New Brunswick, E2K 1E5, Canada
| | - R.A. Swenie
- Department of Ecology and Evolutionary Biology, University of Tennessee, Knoxville, Tennessee 37996, USA
| | - P.B. Matheny
- Department of Ecology and Evolutionary Biology, University of Tennessee, Knoxville, Tennessee 37996, USA
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Cai LQ, Zhao CL. Molecular phylogeny and morphology reveal a new wood-rotting fungal species, Sistotrema yunnanense sp. nov. from the Yunnan-Guizhou Plateau. MYCOSCIENCE 2023; 64:101-108. [PMID: 37397608 PMCID: PMC10308066 DOI: 10.47371/mycosci.2023.04.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2022] [Revised: 04/18/2023] [Accepted: 04/23/2023] [Indexed: 07/04/2023]
Abstract
Wood-rotting fungi are important components of woody plant ecosystems and play an active role in the decomposition and turnover of nutrients from wood, and are among the major groups of Basidiomycota. In this study, a new species of wood-rotting fungus, Sistotrema yunnanense, was proposed based on morphological characteristics and molecular evidence. It is characterized by resupinate basidiomata, a monomitic hyphal system having generative hyphae with clamp connections, suburniform to urniform basidia, and short-cylindrical to oblong ellipsoid basidiospores (4.5-6.5 × 3-4 µm). Phylogenetic analyses performed using the large subunit nuc rDNA indicated that S. yunnanense was nested within the genus Sistotrema s.l. of the family Hydnaceae, within the order Cantharellales.
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Affiliation(s)
- Li-Qiong Cai
- Key Laboratory of Forest Disaster Warning and Control in Universities of Yunnan Province, Southwest Forestry University
| | - Chang-Lin Zhao
- Key Laboratory of Forest Disaster Warning and Control in Universities of Yunnan Province, Southwest Forestry University
- Yunnan Key Laboratory for Fungal Diversity and Green Development, Kunming Institute of Botany, Chinese Academy of Science
- Yunnan Key Laboratory of Gastrodia and Fungal Symbiotic Biology, Zhaotong University
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de Meiras-Ottoni A, Gibertoni TB. Clavarioid fungi from Brazil: novelties in Clavulina (Cantharellales). Mycol Prog 2023. [DOI: 10.1007/s11557-023-01873-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/28/2023]
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Ecological speciation of Japanese hedgehog mushroom: Hydnum subalpinum sp. nov. is distinguished from its sister species H. repando-orientale by means of integrative taxonomy. Mycol Prog 2022. [DOI: 10.1007/s11557-022-01844-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Sugawara R, Shirasuka N, Yamamoto T, Nagamune K, Oguchi K, Maekawa N, Sotome K, Nakagiri A, Ushijima S, Endo N. Two new species of <i>Sistotrema</i> s.l. (<i>Cantharellales</i>) from Japan with descriptions of their ectomycorrhizae. MYCOSCIENCE 2022; 63:102-117. [PMID: 37089627 PMCID: PMC10042317 DOI: 10.47371/mycosci.2022.02.003] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2021] [Revised: 02/02/2022] [Accepted: 02/13/2022] [Indexed: 01/14/2023]
Abstract
We describe two new species of resupinate Sistotrema sensu lato (Cantharellales) collected in Japan: S. flavorhizomorphae and S. chloroporum. Both species have urniform basidia with more than four sterigmata and monomitic hyphal system, oil-rich hyphae in subiculum, which is typical for this genus. Sistotrema chloroporum is characterized by poroid hymenophore partly yellowish-green, basidia 4-6-spored, medium-sized basidiospores (4.5-6.5 × 3.5-6 µm), and broadleaf forest habitat. Sistotrema flavorhizomorphae is characterized by hydnoid-irpicoid hymenophore, bright yellowish rhizomorphs, basidia 6-8-spored, small basidiospores (3-3.5 × 2.5-3 µm), and pine forest habitat. Phylogenetic trees inferred from the fungal nrDNA ITS and LSU and the rpb2 sequences supported that both species were distinct and grouped with other ectomycorrhizal Sistotrema and Hydnum species, but their generic boundary was unclear. Mycorrhizae underneath basidiomes of both species were identified and described via molecular techniques. Mycorrhizae of S. chloroporum have similar characteristics to those of other Sistotrema s.l. and Hydnum species, i.e., S. confluens and H. repandum, whereas S. flavorhizomorphae has a distinct morpho-anatomy, for example, a distinct pseudoparenchymatous mantle. Comprehensive characterizations of basidiomes and mycorrhizae improve the taxonomic analysis of mycorrhizal species of Sistotrema s.l.
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Affiliation(s)
- Ryo Sugawara
- The United Graduate School of Agricultural Sciences, Tottori University
| | - Nana Shirasuka
- Graduate School of Sustainability Science, Tottori University
| | | | | | | | - Nitaro Maekawa
- Fungus/Mushroom Resource and Research Center, Faculty of Agriculture, Tottori University
| | - Kozue Sotome
- Fungus/Mushroom Resource and Research Center, Faculty of Agriculture, Tottori University
| | - Akira Nakagiri
- Fungus/Mushroom Resource and Research Center, Faculty of Agriculture, Tottori University
| | | | - Naoki Endo
- Fungus/Mushroom Resource and Research Center, Faculty of Agriculture, Tottori University
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Cao T, Hu YP, Yu JR, Wei TZ, Yuan HS. A phylogenetic overview of the Hydnaceae ( Cantharellales, Basidiomycota) with new taxa from China. Stud Mycol 2022; 99:100121. [PMID: 35035603 PMCID: PMC8717575 DOI: 10.1016/j.simyco.2021.100121] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022] Open
Abstract
The family Hydnaceae (Cantharellales, Basidiomycota) is a group of fungi found worldwide which exhibit stichic nuclear division. The group is highly diverse in morphology, ecology, and phylogeny, and includes some edible species which are popular all over the world. Traditionally, Hydnaceae together with Cantharellaceae, Clavulinaceae and Sistotremataceae are four families in the Cantharellales. The four families were combined and redefined as "Hydnaceae", however, a comprehensive phylogeny based on multiple-marker dataset for the entire Hydnaceae sensu stricto is still lacking and the delimitation is also unclear. We inferred Maximum Likelihood and Bayesian phylogenies for the family Hydnaceae from the data of five DNA regions: the large subunit of nuclear ribosomal RNA gene (nLSU), the internal transcribed spacer regions (ITS), the mitochondrial small subunit rDNA gene (mtSSU), the second largest subunit of RNA polymerase II (RPB2) and the translation elongation factor 1-alpha gene (TEF1). We also produced three more phylogenetic trees for Cantharellus based on 5.8S, nLSU, mtSSU, RPB2 and TEF1, Craterellus and Hydnum both based on the combined nLSU and ITS. This study has reproduced the status of Hydnaceae in the order Cantharellales, and phylogenetically confirmed seventeen genera in Hydnaceae. Twenty nine new taxa or synonyms are described, revealed, proposed, or reported, including eight new subgenera (Cantharellus subgenus Magnus, Craterellus subgenus Cariosi, subg. Craterellus, subg. Imperforati, subg. Lamelles, subg. Longibasidiosi, subg. Ovoidei, and Hydnum subgenus Brevispina); seventeen new species (Ca. laevihymeninus, Ca. magnus, Ca. subminor, Cr. badiogriseus, Cr. croceialbus, Cr. macrosporus, Cr. squamatus, H. brevispinum, H. flabellatum, H. flavidocanum, H. longibasidium, H. pallidocroceum, H. pallidomarginatum, H. sphaericum, H. tangerinum, H. tenuistipitum and H. ventricosum); two synonyms (Ca. anzutake and Ca. tuberculosporus as Ca. yunnanensis), and two newly recorded species (H. albomagnum and H. minum). The distinguishing characters of the new species and subgenera as well as their allied taxa are discussed in the notes which follow them. The delimitation and diversity in morphology, ecology, and phylogeny of Hydnaceae is discussed. Notes of seventeen genera which are phylogenetically accepted in Hydnaceae by this study and a key to the genera in Hydnaceae are provided.
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Key Words
- Cantharellales
- Cantharellus anzutake W. Ogawa, N. Endo, M. Fukuda and A. Yamada and Ca. tuberculosporus M. Zang as Ca. yunnanensis W.F. Chiu
- Cantharellus laevihymeninus T. Cao & H.S. Yuan, Ca. magnus T. Cao & H.S. Yuan, Ca. subminor T. Cao & H.S. Yuan
- Craterellus badiogriseus T. Cao & H.S. Yuan, Cr. croceialbus T. Cao & H.S. Yuan, Cr. macrosporus T. Cao & H.S. Yuan, Cr. squamatus T. Cao & H.S. Yuan
- Hydnaceae
- Hydnum albomagnum Banker
- Hydnum brevispinum T. Cao & H.S. Yuan, H. flabellatum T. Cao & H.S. Yuan, H. flavidocanum T. Cao & H.S. Yuan, H. longibasidium T. Cao & H.S. Yuan, H. pallidocroceum T. Cao & H.S. Yuan, H. pallidomarginatum T. Cao & H.S. Yuan, H. sphaericum T. Cao & H.S. Yuan, H. tangerinum T. Cao & H.S. Yuan, H. tenuistipitum T. Cao & H.S. Yuan, H. ventricosum T. Cao & H.S. Yuan
- Hydnum minum Yanaga & N. Maek
- In genus Cantharellus: Cantharellus subgenus Magnus T. Cao & H.S. Yuan
- Multiple-marker phylogeny
- Taxonomy
- in genus Craterellus: Craterellus subgenus Cariosi T. Cao & H.S. Yuan, subg. Craterellus, subg. Imperforati T. Cao & H.S. Yuan, subg. Lamelles T. Cao & H.S. Yuan, subg. Longibasidiosi T. Cao & H.S. Yuan, subg. Ovoidei T. Cao & H.S. Yuan
- in genus Hydnum: Hydnum subgenus Brevispina T. Cao & H.S. Yuan
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Affiliation(s)
- Ting Cao
- CAS Key Laboratory of Forest Ecology and Management, Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang 110164, PR China.,University of the Chinese Academy of Sciences, Beijing 100049, PR China
| | - Ya-Ping Hu
- Nanjing Institute of Environmental Sciences, MEE/State Environmental Protection Scientific Observation and Research Station for Ecological Environment of Wuyi Mountains, Nanjing 210042, PR China
| | - Jia-Rui Yu
- CAS Key Laboratory of Forest Ecology and Management, Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang 110164, PR China.,University of the Chinese Academy of Sciences, Beijing 100049, PR China
| | - Tie-Zheng Wei
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, PR China
| | - Hai-Sheng Yuan
- CAS Key Laboratory of Forest Ecology and Management, Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang 110164, PR China.,University of the Chinese Academy of Sciences, Beijing 100049, PR China
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Lebel T, Douch J, Tegart L, Vaughan L, Cooper J, Nuytinck J. Untangling the Lactifluus clarkeae - Lf. flocktoniae( Russulaceae) species complex in Australasia. PERSOONIA 2021; 47:1-44. [PMID: 38352975 PMCID: PMC10784664 DOI: 10.3767/persoonia.2023.47.01] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Figures] [Subscribe] [Scholar Register] [Received: 11/06/2020] [Accepted: 04/09/2021] [Indexed: 02/16/2024]
Abstract
The Lactifluus clarkeae complex is a commonly observed, generally brightly coloured, group of mushrooms that are usually associated with Nothofagus or Myrtaceous hosts in Australia and New Zealand. For this study collections labelled as 'Lactarius clarkeae', 'Russula flocktoniae' and 'Lactarius subclarkeae' were examined morphologically and molecularly. Analyses of molecular data showed a high cryptic diversity, with sequences scattered across 11 clades in three subgenera within Lactifluus, and a single collection in Russula. We select epitypes to anchor the currently accepted concepts of Lf. clarkeae s.str. and Lf. flocktoniae s.str. The name Lf. subclarkeae could not be applied to any of the collections examined, as none had a lamprotrichoderm pileipellis. Lactifluus clarkeae var. aurantioruber is raised to species level, and six new species are described, three in subg. Lactifluus: Lf. jetiae, Lf. pagodicystidiatus, and Lf. rugulostipitatus, and three in subg. Gymnocarpi: Lf. albens, Lf. psammophilus, and Lf. pseudoflocktoniae. A new collection of Lf. russulisporus provides a significant range extension for the species. Untangling this complex will enable better identification of species and increase understanding of diversity and specific habitat associations of macrofungi. Citation: Lebel T, Douch J, Tegart L, et al. 2021. Untangling the Lactifluus clarkeae - Lf. flocktoniae (Russulaceae) species complex in Australasia. Persoonia 47: 1-44. https://doi.org/10.3767/persoonia.2021.47.01.
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Affiliation(s)
- T. Lebel
- Botanic Gardens and State Herbarium, Hackney Rd, Adelaide, South Australia 5000, Australia
- Royal Botanic Gardens Victoria, Birdwood Avenue, South Yarra, Victoria, 3141 Australia
- Manaaki Whenua - Landcare Research, P.O. Box 69040, Lincoln 7640, New Zealand
| | - J. Douch
- Royal Botanic Gardens Victoria, Birdwood Avenue, South Yarra, Victoria, 3141 Australia
- University of Melbourne, Faculty of Veterinary and Agricultural Sciences, Department of Veterinary Biosciences, Asia-Pacific Centre for Animal Health
| | - L. Tegart
- Royal Botanic Gardens Victoria, Birdwood Avenue, South Yarra, Victoria, 3141 Australia
- Menzies Institute for Medical Research, University of Tasmania, Hobart, Tasmania 7000, Australia
| | - L. Vaughan
- Royal Botanic Gardens Victoria, Birdwood Avenue, South Yarra, Victoria, 3141 Australia
- University of Melbourne, School of Biosciences, Parkville, Victoria 3010, Australia
| | - J.A. Cooper
- Manaaki Whenua - Landcare Research, P.O. Box 69040, Lincoln 7640, New Zealand
| | - J. Nuytinck
- Naturalis Biodiversity Center, Darwinweg 2, 2333 CR Leiden, The Netherlands
- Ghent University, Department of Biology, K.L. Ledeganckstraat 35, 9000 Ghent, Belgium
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Mack J, Assabgui R, Seifert K. Taxonomy and phylogeny of the basidiomycetous hyphomycete genus Hormomyces. Fungal Syst Evol 2021; 7:177-196. [PMID: 34124623 PMCID: PMC8166209 DOI: 10.3114/fuse.2021.07.09] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2020] [Accepted: 01/21/2021] [Indexed: 01/08/2023] Open
Abstract
The taxonomy of the genus Hormomyces, typified by Hormomyces aurantiacus, which based on circumstantial evidence was long assumed to be the hyphomycetous asexual morph of Tremella mesenterica (Tremellales, Tremellomycetes) or occasionally Dacrymyces (Dacrymycetales, Dacrymycetes), is revised. Phylogenies based on the three nuc rDNA markers [internal transcribed spacers (ITS), 28S large ribosomal subunit nrDNA (28S) and 18S small ribosomal subunit nrDNA (18S)], based on cultures from Canada and the United States, suggest that the genus is synonymous with Tulasnella (Cantharellales, Agaricomycetes) rather than Tremella or Dacrymyces. Morphological studies of 38 fungarium specimens of Hormomyces, including the type specimens of H. callorioides, H. fragiformis, H. paridiphilus and H. peniophorae and examination of the protologues of H. abieticola, H. aurantiacus and H. pezizoideus suggest that H. callorioides and H. fragiformis are conspecific with H. aurantiacus while the remaining species are unlikely to be related to Tulasnella. The conidial chains produced by H. aurantiacus are similar to monilioid cells of asexual morphs of Tulasnella species formerly referred to the genus Epulorhiza. The new combination Tulasnella aurantiaca is proposed and the species is redescribed, illustrated and compared with similar fungi. The ecological niche of T. aurantiaca and its possible relationship to orchid root endophytes is discussed. A key to asexual genera with similar conidium ontogeny to T. aurantiaca is provided. Citation: Mack J, Assabgui RA, Seifert KA (2021). Taxonomy and phylogeny of the basidiomycetous hyphomycete genus Hormomyces. Fungal Systematics and Evolution 7: 177-196. doi: 10.3114/fuse.2021.07.09.
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Affiliation(s)
- J. Mack
- Biodiversity (Mycology and Microbiology), Agriculture and Agri-Food Canada, 960 Carling Avenue, Ottawa, Ontario K1A 0C6, Canada
| | - R.A. Assabgui
- Biodiversity (Mycology and Microbiology), Agriculture and Agri-Food Canada, 960 Carling Avenue, Ottawa, Ontario K1A 0C6, Canada
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Sugawara R, Sotome K, Maekawa N, Nakagiri A, Endo N. Mycorrhizal synthesis, morpho-anatomical characterization of mycorrhizae, and evaluation of mycorrhiza-forming ability of Hydnum albidum-like species using monokaryotic and dikaryotic cultures. MYCORRHIZA 2021; 31:349-359. [PMID: 33616720 DOI: 10.1007/s00572-021-01024-7] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2020] [Accepted: 02/15/2021] [Indexed: 06/12/2023]
Abstract
Despite the economic and ecological importance of Hydnum species, in vitro synthesis of ectomycorrhizae of this genus has not been reported due to difficulties in establishing pure cultures. We inoculated pure cultures of 12 monokaryotic and 3 dikaryotic mycelial strains of an undescribed Hydnum albidum-like species on roots of axenic Pinus densiflora seedlings to synthesize ectomycorrhizae and to evaluate their mycorrhiza-forming ability. Six months after inoculation, both monokaryotic and dikaryotic strains formed ectomycorrhizae with Hartig net hyphae at the root cortex. Monokaryotic and dikaryotic strains exhibited similar morpho-anatomical characteristics of ectomycorrhizae, with the exception for clamped septa of emanating and outer mantle hyphae in the latter. Between monokaryotic and descendant dikaryotic strains, there were no significant differences in number of mycorrhizae in pine seedlings, whereas monokaryotic strains showed a greater total number of root tips and lower colonization rates than the descendant dikaryotic strains. These results indicate that both monokaryotic and dikaryotic mycelia of the H. albidum-like species can form mycorrhizae under axenic condition, and that can be applied toward the cultivation of hedgehog mushrooms.
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Affiliation(s)
- Ryo Sugawara
- The United Graduate School of Agricultural Sciences, Tottori University, 4-101, Koyama, Tottori, 680-8553, Japan
| | - Kozue Sotome
- Fungus/Mushroom Resource and Research Center, Faculty of Agriculture, Tottori University, 4-101, Koyama, Tottori, 680-8553, Japan
| | - Nitaro Maekawa
- Fungus/Mushroom Resource and Research Center, Faculty of Agriculture, Tottori University, 4-101, Koyama, Tottori, 680-8553, Japan
| | - Akira Nakagiri
- Fungus/Mushroom Resource and Research Center, Faculty of Agriculture, Tottori University, 4-101, Koyama, Tottori, 680-8553, Japan
| | - Naoki Endo
- Fungus/Mushroom Resource and Research Center, Faculty of Agriculture, Tottori University, 4-101, Koyama, Tottori, 680-8553, Japan.
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14
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Zhang Y, Mo M, Yang L, Mi F, Cao Y, Liu C, Tang X, Wang P, Xu J. Exploring the Species Diversity of Edible Mushrooms in Yunnan, Southwestern China, by DNA Barcoding. J Fungi (Basel) 2021; 7:310. [PMID: 33920593 PMCID: PMC8074183 DOI: 10.3390/jof7040310] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2021] [Revised: 04/05/2021] [Accepted: 04/08/2021] [Indexed: 02/07/2023] Open
Abstract
Yunnan Province, China, is famous for its abundant wild edible mushroom diversity and a rich source of the world's wild mushroom trade markets. However, much remains unknown about the diversity of edible mushrooms, including the number of wild edible mushroom species and their distributions. In this study, we collected and analyzed 3585 mushroom samples from wild mushroom markets in 35 counties across Yunnan Province from 2010 to 2019. Among these samples, we successfully obtained the DNA barcode sequences from 2198 samples. Sequence comparisons revealed that these 2198 samples likely belonged to 159 known species in 56 different genera, 31 families, 11 orders, 2 classes, and 2 phyla. Significantly, 51.13% of these samples had sequence similarities to known species at lower than 97%, likely representing new taxa. Further phylogenetic analyses on several common mushroom groups including 1536 internal transcribed spacer (ITS) sequences suggested the existence of 20 new (cryptic) species in these groups. The extensive new and cryptic species diversity in wild mushroom markets in Yunnan calls for greater attention for the conservation and utilization of these resources. Our results on both the distinct barcode sequences and the distributions of these sequences should facilitate new mushroom species discovery and forensic authentication of high-valued mushrooms and contribute to the scientific inventory for the management of wild mushroom markets.
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Affiliation(s)
- Ying Zhang
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, and Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650032, China; (Y.Z.); (M.M.); (L.Y.); (F.M.); (Y.C.); (C.L.); (X.T.); (P.W.)
| | - Meizi Mo
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, and Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650032, China; (Y.Z.); (M.M.); (L.Y.); (F.M.); (Y.C.); (C.L.); (X.T.); (P.W.)
- School of Life Science, Yunnan University, Kunming 650032, China
| | - Liu Yang
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, and Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650032, China; (Y.Z.); (M.M.); (L.Y.); (F.M.); (Y.C.); (C.L.); (X.T.); (P.W.)
- School of Life Science, Yunnan University, Kunming 650032, China
| | - Fei Mi
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, and Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650032, China; (Y.Z.); (M.M.); (L.Y.); (F.M.); (Y.C.); (C.L.); (X.T.); (P.W.)
| | - Yang Cao
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, and Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650032, China; (Y.Z.); (M.M.); (L.Y.); (F.M.); (Y.C.); (C.L.); (X.T.); (P.W.)
| | - Chunli Liu
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, and Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650032, China; (Y.Z.); (M.M.); (L.Y.); (F.M.); (Y.C.); (C.L.); (X.T.); (P.W.)
| | - Xiaozhao Tang
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, and Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650032, China; (Y.Z.); (M.M.); (L.Y.); (F.M.); (Y.C.); (C.L.); (X.T.); (P.W.)
| | - Pengfei Wang
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, and Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650032, China; (Y.Z.); (M.M.); (L.Y.); (F.M.); (Y.C.); (C.L.); (X.T.); (P.W.)
| | - Jianping Xu
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, and Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650032, China; (Y.Z.); (M.M.); (L.Y.); (F.M.); (Y.C.); (C.L.); (X.T.); (P.W.)
- Department of Biology, McMaster University, Hamilton, ON L8S 4K1, Canada
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15
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Lofgren LA, Nguyen NH, Vilgalys R, Ruytinx J, Liao HL, Branco S, Kuo A, LaButti K, Lipzen A, Andreopoulos W, Pangilinan J, Riley R, Hundley H, Na H, Barry K, Grigoriev IV, Stajich JE, Kennedy PG. Comparative genomics reveals dynamic genome evolution in host specialist ectomycorrhizal fungi. THE NEW PHYTOLOGIST 2021; 230:774-792. [PMID: 33355923 PMCID: PMC7969408 DOI: 10.1111/nph.17160] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2020] [Accepted: 12/16/2020] [Indexed: 05/24/2023]
Abstract
While there has been significant progress characterizing the 'symbiotic toolkit' of ectomycorrhizal (ECM) fungi, how host specificity may be encoded into ECM fungal genomes remains poorly understood. We conducted a comparative genomic analysis of ECM fungal host specialists and generalists, focusing on the specialist genus Suillus. Global analyses of genome dynamics across 46 species were assessed, along with targeted analyses of three classes of molecules previously identified as important determinants of host specificity: small secreted proteins (SSPs), secondary metabolites (SMs) and G-protein coupled receptors (GPCRs). Relative to other ECM fungi, including other host specialists, Suillus had highly dynamic genomes including numerous rapidly evolving gene families and many domain expansions and contractions. Targeted analyses supported a role for SMs but not SSPs or GPCRs in Suillus host specificity. Phylogenomic-based ancestral state reconstruction identified Larix as the ancestral host of Suillus, with multiple independent switches between white and red pine hosts. These results suggest that like other defining characteristics of the ECM lifestyle, host specificity is a dynamic process at the genome level. In the case of Suillus, both SMs and pathways involved in the deactivation of reactive oxygen species appear to be strongly associated with enhanced host specificity.
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Affiliation(s)
- Lotus A Lofgren
- Department of Microbiology and Plant Pathology, University of California Riverside, Riverside, CA, 92507, USA
- Department of Plant and Microbial Biology, University of Minnesota, St Paul, MN, 55108, USA
| | - Nhu H Nguyen
- Department of Tropical Plant and Soil Science, University of Hawaii, Manoa, HI, 96822, USA
| | - Rytas Vilgalys
- Department of Biology, Duke University, Durham, NC, 27708, USA
| | - Joske Ruytinx
- Research group Microbiology, Department of Bio-engineering Sciences, Vrije Universiteit Brussel, Brussel, BE1500, Belgium
| | - Hui-Ling Liao
- Department of Soil Microbial Ecology, University of Florida, Quincy, FL, 32351, USA
| | - Sara Branco
- Department of Integrative Biology, University of Colorado Denver, Denver, CO, 80204, USA
| | - Alan Kuo
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA
| | - Kurt LaButti
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA
| | - Anna Lipzen
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA
| | - William Andreopoulos
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA
| | - Jasmyn Pangilinan
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA
| | - Robert Riley
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA
| | - Hope Hundley
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA
| | - Hyunsoo Na
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA
| | - Kerrie Barry
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA
| | - Igor V Grigoriev
- US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA
- Department of Plant and Microbial Biology, University of California, Berkeley, CA, 94720, USA
| | - Jason E Stajich
- Department of Microbiology and Plant Pathology, University of California Riverside, Riverside, CA, 92507, USA
| | - Peter G Kennedy
- Department of Plant and Microbial Biology, University of Minnesota, St Paul, MN, 55108, USA
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16
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He MQ, Zhao RL, Hyde KD, Begerow D, Kemler M, Yurkov A, McKenzie EHC, Raspé O, Kakishima M, Sánchez-Ramírez S, Vellinga EC, Halling R, Papp V, Zmitrovich IV, Buyck B, Ertz D, Wijayawardene NN, Cui BK, Schoutteten N, Liu XZ, Li TH, Yao YJ, Zhu XY, Liu AQ, Li GJ, Zhang MZ, Ling ZL, Cao B, Antonín V, Boekhout T, da Silva BDB, De Crop E, Decock C, Dima B, Dutta AK, Fell JW, Geml J, Ghobad-Nejhad M, Giachini AJ, Gibertoni TB, Gorjón SP, Haelewaters D, He SH, Hodkinson BP, Horak E, Hoshino T, Justo A, Lim YW, Menolli N, Mešić A, Moncalvo JM, Mueller GM, Nagy LG, Nilsson RH, Noordeloos M, Nuytinck J, Orihara T, Ratchadawan C, Rajchenberg M, Silva-Filho AGS, Sulzbacher MA, Tkalčec Z, Valenzuela R, Verbeken A, Vizzini A, Wartchow F, Wei TZ, Weiß M, Zhao CL, Kirk PM. Notes, outline and divergence times of Basidiomycota. FUNGAL DIVERS 2019. [DOI: 10.1007/s13225-019-00435-4] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
AbstractThe Basidiomycota constitutes a major phylum of the kingdom Fungi and is second in species numbers to the Ascomycota. The present work provides an overview of all validly published, currently used basidiomycete genera to date in a single document. An outline of all genera of Basidiomycota is provided, which includes 1928 currently used genera names, with 1263 synonyms, which are distributed in 241 families, 68 orders, 18 classes and four subphyla. We provide brief notes for each accepted genus including information on classification, number of accepted species, type species, life mode, habitat, distribution, and sequence information. Furthermore, three phylogenetic analyses with combined LSU, SSU, 5.8s, rpb1, rpb2, and ef1 datasets for the subphyla Agaricomycotina, Pucciniomycotina and Ustilaginomycotina are conducted, respectively. Divergence time estimates are provided to the family level with 632 species from 62 orders, 168 families and 605 genera. Our study indicates that the divergence times of the subphyla in Basidiomycota are 406–430 Mya, classes are 211–383 Mya, and orders are 99–323 Mya, which are largely consistent with previous studies. In this study, all phylogenetically supported families were dated, with the families of Agaricomycotina diverging from 27–178 Mya, Pucciniomycotina from 85–222 Mya, and Ustilaginomycotina from 79–177 Mya. Divergence times as additional criterion in ranking provide additional evidence to resolve taxonomic problems in the Basidiomycota taxonomic system, and also provide a better understanding of their phylogeny and evolution.
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Sugawara R, Yamada A, Kawai M, Sotome K, Maekawa N, Nakagiri A, Endo N. Establishment of monokaryotic and dikaryotic isolates of Hedgehog mushrooms (Hydnum repandum and related species) from basidiospores. MYCOSCIENCE 2019. [DOI: 10.1016/j.myc.2019.02.007] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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18
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Swenie RA, Baroni TJ, Matheny PB. Six new species and reports of Hydnum (Cantharellales) from eastern North America. MycoKeys 2018:35-72. [PMID: 30564052 PMCID: PMC6286385 DOI: 10.3897/mycokeys.42.27369] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2018] [Accepted: 11/01/2018] [Indexed: 11/18/2022] Open
Abstract
Five species of Hydnum have been generally recognized from eastern North America based on morphological recognition: H.albidum, H.albomagnum, H.repandum and varieties, H.rufescens, and H.umbilicatum. Other unique North American species, such as H.caespitosum and H.washingtonianum, are either illegitimately named or considered synonymous with European taxa. Here, seventeen phylogenetic species of Hydnum are detected from eastern North America based on a molecular phylogenetic survey of ITS sequences from herbarium collections and GenBank data, including environmental sequences. Based on current distribution results, sixteen of these species appear endemic to North America. Of these, six species are described as new: H.alboaurantiacum, H.cuspidatum, H.ferruginescens, H.subconnatum, H.subtilior, and H.vagabundum. Geographic range extensions and taxonomic notes are provided for five additional species recently described as new from eastern North America. A new name, H.geminum, is proposed for H.caespitosum Banning ex Peck, non Valenti. Overall, species of Hydnum are best recognized by a combination of morphological and molecular phylogenetic analyses. Taxonomic descriptions are provided for seventeen species, including epitype designations for H.albidum, H.albomagnum, and H.umbilicatum, taxa described more than 100 years ago, and molecular annotation of the isotype of H.washingtonianum. Photographs and a key to eastern North American Hydnum species are presented.
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Affiliation(s)
- Rachel A Swenie
- Department of Ecology and Evolutionary Biology, 569 Dabney Hall, University of Tennessee, Knoxville, TN 37996, USA University of Tennessee Knoxville United States of America
| | - Timothy J Baroni
- Department of Biological Sciences, PO Box 2000, State University of New York, College at Cortland, Cortland, New York 13045, USA State University of New York New York United States of America
| | - P Brandon Matheny
- Department of Ecology and Evolutionary Biology, 569 Dabney Hall, University of Tennessee, Knoxville, TN 37996, USA University of Tennessee Knoxville United States of America
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19
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Wang XH, Halling RE, Hofstetter V, Lebel T, Buyck B. Phylogeny, biogeography and taxonomic re-assessment of Multifurca (Russulaceae, Russulales) using three-locus data. PLoS One 2018; 13:e0205840. [PMID: 30403698 PMCID: PMC6221288 DOI: 10.1371/journal.pone.0205840] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2018] [Accepted: 10/01/2018] [Indexed: 11/19/2022] Open
Abstract
Multifurca is a small genus newly established to accommodate lactarioid and russuloid species with some characters reminiscent of corticoid members of Russulaceae. It shows an amphi-pacific distribution with strong preference for the tropical zone of the Northern Hemisphere and thus has particular significance for biogeographical study. Using worldwide samples and three loci (ITS, 28S rDNA and rpb2), we demonstrated that Multifurca is split into two highly supported major clades that are here recognized at the subgeneric level: subg. Furcata subg. nov. exclusively includes lactarioid species, while subg. Multifurca includes species with a russuloid habit. Using phylogenetic species recognition and comparison of genetic distances we recognize five new and six previously described species, almost double the known number of species before this study. Molecular dating using a Bayesian method suggested that Multifurca originated in early Paleocene and diversified in the Eocene. The most recent interspecific divergences occurred both in Asia and America, roughly at the same time around the Pliocene. Ancestral area reconstruction and comparisons of genetic distances and morphology suggested an early divergence within Australasia or tropical Asia. From the early Miocene to Pliocene, multiple dispersals/migrations to Australasia and North America by island hopping or land bridge likely happened. Vicariance at the late Tertiary might be the most likely mechanism accounting for the eastern Asia-southeastern North America and Australasia-tropical Asia disjunct distributions. The shared polymorphisms in the ITS alignment, numerous degenerated base pairs in the rpb2 sequences and weak conflict between the ITS and LSU genealogies of M. subg. Furcata suggest recent speciation. Host specificity of Multifurca species or species pairs is relatively low. Host shifts are believed to have aided establishment in new territories during the dispersals and migrations.
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Affiliation(s)
- Xiang-Hua Wang
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, P. R. China
| | - Roy E. Halling
- New York Botanical Garden, Institute of Systematic Botany, Bronx, New York, United States of America
| | - Valérie Hofstetter
- Agroscope, Plant Protection, Mycology and Biotechnology Lab, Nyon, Switzerland
| | - Teresa Lebel
- National Herbarium of Victoria, Royal Botanic Gardens Victoria, Melbourne, Australia
| | - Bart Buyck
- Institut de Systématique, Ecologie, Biodiversité (ISYEB), Muséum national D’histoire naturelle, CNRS, Sorbonne Université, Paris, France
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20
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Niskanen T, Liimatainen K, Nuytinck J, Kirk P, Ibarguren IO, Garibay-Orijel R, Norvell L, Huhtinen S, Kytövuori I, Ruotsalainen J, Niemelä T, Ammirati JF, Tedersoo L. Identifying and naming the currently known diversity of the genus Hydnum, with an emphasis on European and North American taxa. Mycologia 2018; 110:890-918. [DOI: 10.1080/00275514.2018.1477004] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/16/2022]
Affiliation(s)
- Tuula Niskanen
- Jodrell Laboratory, Royal Botanic Gardens, Kew, Surrey TW9 3AB, United Kingdom
| | - Kare Liimatainen
- Jodrell Laboratory, Royal Botanic Gardens, Kew, Surrey TW9 3AB, United Kingdom
- Department of Biosciences, Plant Biology, P.O. Box 65, FI-00014 University of Helsinki, Helsinki, Finland
| | - Jorinde Nuytinck
- Naturalis Biodiversity Center, P.O. Box 9517, 2300 RA Leiden, The Netherlands
| | - Paul Kirk
- Jodrell Laboratory, Royal Botanic Gardens, Kew, Surrey TW9 3AB, United Kingdom
| | - Ibai Olariaga Ibarguren
- Department of Biology and Geology, Physics and Inorganic Chemistry, King Juan Carlos University, c/Tulipan 28933, Móstoles, Spain
| | - Roberto Garibay-Orijel
- Instituto de Biología, Universidad Nacional Autónoma de México, Tercer Circuito s/n, Ciudad Universitaria, Delegación Coyoacán, A.P. 70-233, C.P. 04510 México, D.F., México
| | - Lorelei Norvell
- Pacific Northwest Mycology Service, 6720 NW Skylne Boulevard, Portland, Oregon 97229
| | - Seppo Huhtinen
- Biodiversity Unit, Herbarium, University of Turku, FI-20014 Turku, Finland
| | - Ilkka Kytövuori
- Botanical Museum, P.O. Box 7, FI-00014 University of Helsinki, Helsinki, Finland
| | | | - Tuomo Niemelä
- Botanical Museum, P.O. Box 7, FI-00014 University of Helsinki, Helsinki, Finland
| | - Joseph F. Ammirati
- Department of Biology, Box 351800, University of Washington, Seattle, Washington 98195-1800
| | - Leho Tedersoo
- Natural History Museum, University of Tartu, 14A Ravila, 50411 Tartu, Estonia
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21
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Feng B, Yang Z. Studies on diversity of higher fungi in Yunnan, southwestern China: A review. PLANT DIVERSITY 2018; 40:165-171. [PMID: 30740561 PMCID: PMC6137262 DOI: 10.1016/j.pld.2018.07.001] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2018] [Revised: 07/02/2018] [Accepted: 07/05/2018] [Indexed: 06/02/2023]
Abstract
Yunnan is exceedingly rich in higher fungi (Ascomycota and Basidiomycota). Given that the number of fungi (including lichens) occurring in a given area is, as Hawksworth suggested, roughly six times that of local vascular plants, a total of approximately 104,000 fungal species would be expected in Yunnan. However, to date only about 6000 fungal species, including roughly 3000 species of higher fungi, have been reported from the province. Although studies on Yunnan's fungi started in the late nineteenth century, significant progress has been made only in the last forty-five years. Over the first twenty-five years of this period, studies on fungal diversity in this area have largely been about taxonomy based on morphological characters and partially on geographical distribution. Over the past twenty years, the combination of both morphological and molecular phylogenetic approaches has become the preferred method to help understand the diversity and evolution of higher fungi. This review focuses on our current knowledge of how geological, geographical, and ecological factors may have contributed to the diversity patterns of higher fungi in Yunnan. Based on this knowledge, three aspects for future studies are suggested.
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Affiliation(s)
| | - Zhuliang Yang
- Corresponding author. Kunming Institute of Botany, Chinese Academy of Sciences, Lanhei Road #132, Kunming 650201, Yunnan, China.
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22
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Wang XH, Das K, Horman J, Antonin V, Baghela A, Chakraborty D, Hembrom ME, Nakasone K, Ortiz-Santana B, Vizzini A, Hofstetter V, Buyck B. Fungal Biodiversity Profiles 51-60. CRYPTOGAMIE MYCOL 2018. [DOI: 10.7872/crym/v39.iss2.2018.211] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Xiang-Hua Wang
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Lanhei Road 132, Kunming 650201, P. R. China
| | - Kanad Das
- Cryptogamic Unit, Botanical Survey of India, P.O. Botanic Garden, Howrah 711103, India,
| | - Joel Horman
- 11 Ramblewood Road, Ridge, New York, U.S.A., 11961,
| | - Vladimir Antonin
- Department of Botany, Moravian Museum, Zelný trh 6, CZ-659 37 Brno, Czech Republic,
| | - Abhishek Baghela
- MACS' Agharkar Research Institute, Biodiversity and Palaeobiology Group, National Fungal Culture Collection of India (NFCCI), G.G. Agarkar Road, Pune – 411004, India,
| | | | - Manoj E. Hembrom
- Central National Herbarium, Botanical Survey of India, P.O. Botanic Garden, Howrah 711103, India,
| | - Karen Nakasone
- Center for Forest Mycology Research, Northern Research Station, One Gifford Pinchot Drive, Madison, Wisconsin, U.S.A, 53726,,
| | - Beatriz Ortiz-Santana
- Center for Forest Mycology Research, Northern Research Station, One Gifford Pinchot Drive, Madison, Wisconsin, U.S.A, 53726,,
| | - Alfredo Vizzini
- Department of Life Sciences and Systems Biology, University of Torino, Viale P.A. Mattioli 25, I-10125 Torino, Italy,
| | - Valérie Hofstetter
- Agroscope Changins-Wädenswil Research Station, ACW, Department of plant protection, Rte de Duiller, 1260 Nyon, Switzerland
| | - Bart Buyck
- Institut de Systematique, Evolution, Biodiversité (ISYEB-UMR7205), Sorbonne Université, Museum National d'Histoire Naturelle, Case Postale 39, 12 Rue Buffon, F-75005 Paris, France,
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Buyck B, Duhem B, Das K, Jayawardena RS, Niveiro N, Pereira OL, Prasher IB, Adhikari S, Albertó EO, Bulgakov TS, Castañeda-Ruiz RF, Hembrom ME, Hyde KD, Lewis DP, Michlig A, Nuytinck J, Parihar A, Popoff OF, Ramirez NA, Silva MD, Verma RK, Hofstetter V. Fungal Biodiversity Profiles 21–30. CRYPTOGAMIE MYCOL 2017. [DOI: 10.7872/crym/v38.iss1.2017.101] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Bart Buyck
- Museum National d'Histoire Naturelle, CP 39, ISYEB, UMR 7205 CNRS MNHN UPMC EPHE, 12 Rue Buffon, F-75005 Paris, France
| | - Bernard Duhem
- Museum National d'Histoire Naturelle, UMS2700, OMSI, 16 rue Buffon, F-75005 Paris, France †
| | - Kanad Das
- Cryptogamic Unit, Botanical Survey of India, P.O. Botanic Garden, Howrah 711103, India
| | - Ruvishika S. Jayawardena
- Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, People's Republic of China
- Central National Herbarium, Botanical Survey of India, P.O. Botanic Garden, Howrah 711103, India
| | - Nicolás Niveiro
- Instituto de Botánica del Nordeste, IBONE (UNNE-CONICET). Sargento Cabral 2131, CC 209 Corrientes Capital, CP 3400, Argentina
- Departamento de Biología, Facultad de Ciencias Exactas y Naturales y Agrimensura, Universidad Nacional del Nordeste. Av. Libertad 5470, Corrientes Capital, CP 3400, Argentina
| | - Olinto L. Pereira
- Departamento de Fitopatologia, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil
| | - Indu B. Prasher
- Department of Botany, Mycology and Plant Pathology Laboratory, Panjab University Chandigarh, 160014, India
| | - Sinchan Adhikari
- Department of Botany, University of Kalyani, Kalyani 741235, Nadia, West Bengal, India
| | - Edgardo Omar Albertó
- Instituto de Investigaciones Biotecnológicas — Instituto Tecnológico de Chascomús. IIB—INTECH (UNSAM—CONICET). Cam. Circ. Laguna Km. 6, Chascomús, Buenos Aires, CP 7130, Argentina
| | - Timur S. Bulgakov
- Academy of Biology and Biotechnology, Southern Federal University, Rostov-on-Don 344090, Rostov Region, Russia
| | - Rafael F. Castañeda-Ruiz
- Instituto de Investigaciones Fundamentales en Agricultura Tropical “Alejandro de Humboldt” (INIFAT), calle 1, esq. 2, Santiago de Las Vegas, Ciudad de La Habana, C.P. 17200, Cuba
| | - Manoj E. Hembrom
- Central National Herbarium, Botanical Survey of India, P.O. Botanic Garden, Howrah 711103, India
| | - Kevin D. Hyde
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand
- Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China
| | | | - Andrea Michlig
- Instituto de Botánica del Nordeste, IBONE (UNNE-CONICET). Sargento Cabral 2131, CC 209 Corrientes Capital, CP 3400, Argentina
- Departamento de Biología, Facultad de Ciencias Exactas y Naturales y Agrimensura, Universidad Nacional del Nordeste. Av. Libertad 5470, Corrientes Capital, CP 3400, Argentina
| | - Jorinde Nuytinck
- Naturalis Biodiversity Center, P.O. Box 9517, 2300RA Leiden, The Netherlands
| | - Arvind Parihar
- Cryptogamic Unit, Botanical Survey of India, P.O. Botanic Garden, Howrah 711103, India
| | - Orlando Fabián Popoff
- Instituto de Botánica del Nordeste, IBONE (UNNE-CONICET). Sargento Cabral 2131, CC 209 Corrientes Capital, CP 3400, Argentina
- Departamento de Biología, Facultad de Ciencias Exactas y Naturales y Agrimensura, Universidad Nacional del Nordeste. Av. Libertad 5470, Corrientes Capital, CP 3400, Argentina
| | - Natalia Andrea Ramirez
- Instituto de Botánica del Nordeste, IBONE (UNNE-CONICET). Sargento Cabral 2131, CC 209 Corrientes Capital, CP 3400, Argentina
- Departamento de Biología, Facultad de Ciencias Exactas y Naturales y Agrimensura, Universidad Nacional del Nordeste. Av. Libertad 5470, Corrientes Capital, CP 3400, Argentina
| | - Meiriele Da Silva
- Departamento de Fitopatologia, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil
| | - Rajnish K. Verma
- Department of Botany, Mycology and Plant Pathology Laboratory, Panjab University Chandigarh, 160014, India
| | - Valérie Hofstetter
- Department of Plant Protection, Agroscope Changins-Wädenswil Research Station ACW, Rte De Duiller, CH-1260 Nyon 1, Switzerland
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