Enhancing the biocatalytic manufacture of the key intermediate of atorvastatin by focused directed evolution of halohydrin dehalogenase

Preparation of (S)-epichlorohydrin using a novel halohydrin dehalogenase by selective conformation adjustment

Chiral epichlorohydrin (ECH) is an attractive intermediate for chiral pharmaceuticals and chemicals preparation. The asymmetric synthesis of chiral ECH using 1,3-dicholoro-2-propanol (1,3-DCP) catalyzed by a haloalcohol dehalogenase (HHDH) was considered as a feasible approach. However, the reverse ring opening reaction caused low optical purity of chiral ECH, thus severely restricts the industrial application of HHDHs. In the present study, a novel selective conformation adjustment strategy was developed with an engineered HheCPS to regulate the kinetic parameters of the forward and reverse reactions, based on site saturation mutation and molecular simulation analysis. The HheCPS mutant E85P was constructed with a markable change in the conformation of (S)-ECH in the substrate pocket and a slight impact on the interaction between 1,3-DCP and the enzyme, which resulted in the kinetic deceleration of the reverse reactions. Compared with HheCPS, the catalytic efficiency (kcat(S)-ECH/Km(S)-ECH) of the reversed reaction dropped to 0.23-fold (from 0.13 to 0.03 mM-1 s-1), while the catalytic efficiency (kcat(1,3-DCP)/Km(1,3-DCP)) of the forward reaction only reduced from 0.83 to 0.71 mM-1 s-1. With 40 mM 1,3-DCP as substrate, HheCPS E85P catalyzed the synthesis of (S)-ECH with the yield up to 55.35% and the e.e. increased from 92.54 to >99%. Our work provided an effective approach for understanding the stereoselective catalytic mechanism as well as the green manufacturing of chiral epoxides.

Mesocellular Silica Foam as Immobilization Carrier for Production of Statin Precursors

The employment of 2-deoxyribose-5-phosphate aldolase (DERA) stands as a prevalent biocatalytic route for synthesizing statin side chains. The main problem with this pathway is the low stability of the enzyme. In this study, mesocellular silica foam (MCF) with different pore sizes was used as a carrier for the covalent immobilization of DERA. Different functionalizing and activating agents were tested and kinetic modeling was subsequently performed. The use of succinic anhydride as an activating agent resulted in an enzyme hyperactivation of approx. 140%, and the stability almost doubled compared to that of the free enzyme. It was also shown that the pore size of MCF has a decisive influence on the stability of the DERA enzyme.

The Time and Place for Nature in Drug Discovery

The case for a renewed focus on Nature in drug discovery is reviewed; not in terms of natural product screening, but how and why biomimetic molecules, especially those produced by natural processes, should deliver in the age of artificial intelligence and screening of vast collections both in vitro and in silico. The declining natural product-likeness of licensed drugs and the consequent physicochemical implications of this trend in the context of current practices are noted. To arrest these trends, the logic of seeking new bioactive agents with enhanced natural mimicry is considered; notably that molecules constructed by proteins (enzymes) are more likely to interact with other proteins (e.g., targets and transporters), a notion validated by natural products. Nature's finite number of building blocks and their interactions necessarily reduce potential numbers of structures, yet these enable expansion of chemical space with their inherent diversity of physical characteristics, pertinent to property-based design. The feasible variations on natural motifs are considered and expanded to encompass pseudo-natural products, leading to the further logical step of harnessing bioprocessing routes to access them. Together, these offer opportunities for enhancing natural mimicry, thereby bringing innovation to drug synthesis exploiting the characteristics of natural recognition processes. The potential for computational guidance to help identifying binding commonalities in the route map is a logical opportunity to enable the design of tailored molecules, with a focus on "organic/biological" rather than purely "synthetic" structures. The design and synthesis of prototype structures should pay dividends in the disposition and efficacy of the molecules, while inherently enabling greener and more sustainable manufacturing techniques.

Contribution of aged polystyrene microplastics to the bioaccumulation of pharmaceuticals in marine organisms using experimental and model analysis

Microplastics (MPs) in the environment would undergo extensive weathering, which can act as a vector affecting the accumulation of pollutants in organisms. However, the risk of organic pollutants adsorbed on aged MPs to marine organisms is poorly understood. This study revealed the contribution of aged polystyrene (PS) MPs to the total bioaccumulation of atorvastatin (ATV) and amlodipine (AML), and assessed the environmental risks via experimental and model analysis. The results showed that pharmaceuticals were more easily released in gastrointestinal fluids from aged MPs relative to that in simulated seawater. The hydrophobic pharmaceuticals were more bioaccessible than hydrophilic ones by organisms. Model analysis showed that ingestion of water and food were the most important uptake routes for pharmaceuticals in marine fish and seabirds, while aged PS MPs could decrease the bioaccumulation of pharmaceuticals (contributed for -2.9% and -1.2% for the total uptake of ATV, and -25.8% and -4.4% for AML), indicating the cleaning effect of aged MPs, and the potential higher exposure risks of pharmaceuticals in warm-blooded organisms than that in cold-blooded ones via ingested MPs. The study revealed the effect of aged MPs to the bioaccumulation of pharmaceuticals in marine organisms, and highlighted the combined risks of aged MPs and pharmaceuticals in the environment.

Insights on photochemical activities of organic components and minerals in dissolved state biochar in the degradation of atorvastatin in aqueous solution

This study systematically investigated the photocatalytic activity of dissolved state biochar (DSB) with different pyrolysis temperature to the degradation of atorvastatin (ATV), a medicine widely used to combat hyperlipidemia. It was found that the photocatalytic efficiency of DSB increased with the decrease of pyrolysis temperature, that is, DSB300 (DSB with 300 °C of pyrolysis temperature) had the greatest photocatalytic activity in same condition, which was attributed to the dual role of DSB300 as heterogeneous photocatalyst and photosensitizer. The mineral components were responsible for the heterogeneous photocatalytic activity of DSB300. Organic carbon components could synergistically enhance the heterogeneous photocatalytic activity by enhancement of electron-hole separation, and contribute to the formation of singlet oxygen (¹O₂) and triplet-excited state (³DSB*) as well. The identification of intermediate products and X-ray photoelectron spectroscopy (XPS) analysis of irradiated DSB300/ATV revealed that cross-coupling reaction between ATV and DSB existed in the photodegradation process of ATV. The detailed photodegradation pathways of ATV were proposed, which was triggered by oxygen insertion of pyrrole ring and hydroxyl addition. Meanwhile, the modification of DSB300 under irradiation was evidently attenuated with ATV as shown by multiple characterizations, which helped to keep the stability of DSB300 in photochemical reaction process.

Enzymatic synthesis of enantiopure alcohols: current state and perspectives

Enantiomerically pure alcohols, as key intermediates, play an essential role in the pharmaceutical, agrochemical and chemical industries. Among the methods used for their production, biotechnological approaches are generally considered a green and effective alternative due to their mild reaction conditions and remarkable enantioselectivity. An increasing number of enzymatic strategies for the synthesis of these compounds has been developed over the years, among which seven primary methodologies can be distinguished as follows: (1) enantioselective water addition to alkenes, (2) enantioselective aldol addition, (3) enantioselective coupling of ketones with hydrogen cyanide, (4) asymmetric reduction of carbonyl compounds, (5) (dynamic) kinetic resolution of racemates, (6) enantioselective hydrolysis of epoxides, and (7) stereoselective hydroxylation of unactivated C-H bonds. Some recent reviews have examined these approaches separately; however, to date, no review has included all the above mentioned strategies. The aim of this mini-review is to provide an overview of all seven enzymatic strategies and draw conclusions on the effect of each approach.