1
|
Puzzarini C, Alessandrini S. Carbamic acid and its dimer: A computational study. J Comput Chem 2024; 45:2501-2512. [PMID: 38970400 DOI: 10.1002/jcc.27442] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2024] [Revised: 05/15/2024] [Accepted: 05/17/2024] [Indexed: 07/08/2024]
Abstract
A recent work by Marks et al. on the formation of carbamic acid in NH 3 -CO 2 interstellar ices pointed out its stability in the gas phase and the concomitant production of its dimer. Prompted by these results and the lack of information on these species, we have performed an accurate structural, energetic and spectroscopic investigation of carbamic acid and its dimer. For the former, the structural and spectroscopic characterization employed composite schemes based on coupled cluster (CC) calculations that account for the extrapolation to the complete basis set limit and core correlation effects. A first important outcome is the definitive confirmation of the nonplanarity of carbamic acid, then followed by an accurate estimate of its rotational and vibrational spectroscopy parameters. As far as the carbamic acid dimer is concerned, the investigation started from the identification of its most stable forms. For them, structure and vibrational properties have been evaluated using density functional theory, while a composite scheme rooted in CC theory has been employed for the energetic characterization. Our results allowed us to provide a better interpretation of the feature observed in the recent experiment mentioned above.
Collapse
Affiliation(s)
- Cristina Puzzarini
- Department of Chemistry "Giacomo Ciamician", University of Bologna, Bologna, Italy
| | - Silvia Alessandrini
- Department of Chemistry "Giacomo Ciamician", University of Bologna, Bologna, Italy
| |
Collapse
|
2
|
Ghosh A, Dey S, Manna D, Ghanty TK. Noble-Gas-Inserted Fluoro(sulphido)boron (FNgBS, Ng = Ar, Kr, and Xe): A Theoretical Prediction. J Phys Chem A 2015; 119:5732-41. [PMID: 25928588 DOI: 10.1021/jp512520y] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The possibility of the existence of a new series of neutral noble gas compound, FNgBS (where Ng = Ar, Kr, Xe), is explored theoretically through the insertion of a Ng atom into the fluoroborosulfide molecule (FBS). Second-order Møller-Plesset perturbation theory, density functional theory, and coupled cluster theory based methods have been employed to predict the structure, stability, harmonic vibrational frequencies, and charge distribution of FNgBS molecules. Through energetics study, it has been found that the molecules could dissociate into global minima products (Ng + FBS) on the respective singlet potential energy surface via a unimolecular dissociation channel; however, the sufficiently large activation energy barriers provide enough kinetic stability to the predicted molecules, which, in turn, prevent them from dissociating into the global minima products. Moreover, the FNgBS species are thermodynamically stable, owing to very high positive energies with respect to other two two-body dissociation channels, leading to FNg + BS and F(-) + NgBS(+), and two three-body dissociation channels, corresponding to the dissociation into F + Ng + BS and F(-) + Ng + BS(+). Furthermore, the Mulliken and NBO charge analysis together with the AIM results reveal that the Ng-B bond is more of covalent in nature, whereas the F-Ng bond is predominantly ionic in character. Thus, these compounds can be better represented as F(-)[NgBS](+). This fact is also supported by the detail analysis of bond length, bond dissociation energy, and stretching force constant values. All of the calculated results reported in this work clearly indicate that it might be possible to prepare and characterize the FNgBS molecules in cryogenic environment through matrix isolation technique by using a mixture of OCS/BF3 in the presence of large quantity of noble gas under suitable experimental conditions.
Collapse
Affiliation(s)
- Ayan Ghosh
- †Laser and Plasma Technology Division, Beam Technology Development Group, Bhabha Atomic Research Centre, Mumbai 400 085, India
| | - Sourav Dey
- ‡Ramakrishna Mission Vidyamandira, Belur Math, West Bengal 711 202, India
| | - Debashree Manna
- §Theoretical Chemistry Section, Chemistry Group, Bhabha Atomic Research Centre, Mumbai 400 085, India
| | - Tapan K Ghanty
- §Theoretical Chemistry Section, Chemistry Group, Bhabha Atomic Research Centre, Mumbai 400 085, India
| |
Collapse
|
3
|
Samdal S, Møllendal H, Guillemin JC. Synthesis, Microwave Spectrum, Quantum Chemical Calculations, and Conformational Composition of the Novel Compound Cyclopropylethylidynephosphine (C3H5CH2C≡P). J Phys Chem A 2014; 118:9994-10001. [DOI: 10.1021/jp508411z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Svein Samdal
- Centre
for Theoretical and Computational Chemistry (CTCC), Department of
Chemistry, University of Oslo, P.O. Box 1033, Blindern, NO-0315 Oslo, Norway
| | - Harald Møllendal
- Centre
for Theoretical and Computational Chemistry (CTCC), Department of
Chemistry, University of Oslo, P.O. Box 1033, Blindern, NO-0315 Oslo, Norway
| | - Jean-Claude Guillemin
- Institut
des Sciences
Chimiques de Rennes, École Nationale Supérieure de Chimie
de Rennes, CNRS, UMR 6226, 11 Allée
de Beaulieu, CS 50837, 35708 Rennes Cedex 7, France
| |
Collapse
|
4
|
Viana RB, Guimarães AR, de Souza AR, da Silva ABF. Molecular properties of the PCO radical: heat of formation and the isomerization pathways. J Mol Model 2014; 20:2074. [PMID: 24504453 DOI: 10.1007/s00894-014-2074-2] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2013] [Accepted: 11/12/2013] [Indexed: 11/29/2022]
Abstract
The potential energy surface of [P,C,O] system in the ground state was investigated by quantum chemical methods. Four different isomers were characterized at the B3LYP/aug-cc-pVTZ: COP (i1), cPCO (i2), PCO (i3), and CPO (i4). The linear species i3 is the global minimum in the ground state surface, while i4 is a bent structure, and i2 is a cyclic isomer. In view to evaluate the bond nature of each isomer, a QTAIM and a NBO analyses were applied. The triangular species presents a ring critical point which confirms its cyclic structure instead of a T-shape one. The stability increases in the following order: i3 > i2 > i1 > i4. The energy gap between i3 and i2 ranges from 49.20 to 51.15 kcal mol(-1). The reaction barrier energies that converge into the direction of i3 showed values around 10 kcal mol(-1), while the reverse barriers are considerably large (62.85 kcal mol(-1)). The i3 heat of formation at 298 K ranges from 11.83 to 19.41 kcal mol(-1).
Collapse
Affiliation(s)
- Rommel B Viana
- Instituto de Química de São Carlos, Universidade de São Paulo, USP, São Carlos, SP, Brasil,
| | | | | | | |
Collapse
|
5
|
Puzzarini C. A theoretical study of the CX2N radicals (X = F, Cl, Br): The effect of halogen substitution on structure, isomerization, and energetics. J Chem Phys 2012; 136:044316. [DOI: 10.1063/1.3678006] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
|
6
|
Helgaker T, Coriani S, Jørgensen P, Kristensen K, Olsen J, Ruud K. Recent Advances in Wave Function-Based Methods of Molecular-Property Calculations. Chem Rev 2012; 112:543-631. [DOI: 10.1021/cr2002239] [Citation(s) in RCA: 463] [Impact Index Per Article: 35.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Trygve Helgaker
- Centre for Theoretical and Computational Chemistry, Department of Chemistry, University of Oslo, P.O. Box 1033 Blindern, N-0315 Oslo, Norway
| | - Sonia Coriani
- Dipartimento di Scienze Chimiche e Farmaceutiche, Università degli Studi di Trieste, Via Giorgieri 1, I-34127 Trieste, Italy
| | - Poul Jørgensen
- Lundbeck Center for Theoretical Chemistry, Department of Chemistry, Aarhus University, 8000 Aarhus C, Denmark
| | - Kasper Kristensen
- Lundbeck Center for Theoretical Chemistry, Department of Chemistry, Aarhus University, 8000 Aarhus C, Denmark
| | - Jeppe Olsen
- Lundbeck Center for Theoretical Chemistry, Department of Chemistry, Aarhus University, 8000 Aarhus C, Denmark
| | - Kenneth Ruud
- Centre for Theoretical and Computational Chemistry, Department of Chemistry, University of Tromsø, N-9037 Tromsø, Norway
| |
Collapse
|
7
|
Li WZ, Pei YW, Zhu HJ, Cheng JB, Li QZ. CASPT2 study on low-lying states of HBS+ and HSB+ cations. Mol Phys 2011. [DOI: 10.1080/00268976.2011.631054] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/15/2022]
Affiliation(s)
- Wen-Zuo Li
- a The Laboratory of Theoretical and Computational Chemistry, College of Chemistry and Chemical Engineering, Yantai University , Yantai 264005 , P.R. China
| | - Yu-Wei Pei
- a The Laboratory of Theoretical and Computational Chemistry, College of Chemistry and Chemical Engineering, Yantai University , Yantai 264005 , P.R. China
| | - Hong-Jie Zhu
- a The Laboratory of Theoretical and Computational Chemistry, College of Chemistry and Chemical Engineering, Yantai University , Yantai 264005 , P.R. China
| | - Jian-Bo Cheng
- a The Laboratory of Theoretical and Computational Chemistry, College of Chemistry and Chemical Engineering, Yantai University , Yantai 264005 , P.R. China
| | - Qing-Zhong Li
- a The Laboratory of Theoretical and Computational Chemistry, College of Chemistry and Chemical Engineering, Yantai University , Yantai 264005 , P.R. China
| |
Collapse
|
8
|
Polák R, Fišer J. Theoretical study of electric field gradients at nitrogen nuclei in HNO, CH3NO and C2H3NO. Chem Phys 2010. [DOI: 10.1016/j.chemphys.2010.07.026] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
|
9
|
Puzzarini C. Extrapolation to the complete basis set limit of structural parameters: comparison of different approaches. J Phys Chem A 2010; 113:14530-5. [PMID: 19799385 DOI: 10.1021/jp9040327] [Citation(s) in RCA: 69] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
For the first time, different procedures for extrapolating structural parameters to the complete basis set limit are compared. More precisely, a well-tested scheme, based on extrapolated gradients, is employed for validating the extrapolation procedure directly applied to geometrical parameters by means of different extrapolation functions. For this purpose, a set of small systems (mostly triatomics), also containing second-row elements, has been chosen.
Collapse
Affiliation(s)
- Cristina Puzzarini
- Dipartimento di Chimica G. Ciamician, Università degli Studi di Bologna, Via Selmi 2, I-40126 Bologna, Italy.
| |
Collapse
|
10
|
Puzzarini C, Barone V. A critical analysis of the structure and vibrational frequencies of F2NO+ and Cl2NO+ from accurate quantum chemical computations. Chem Phys Lett 2008. [DOI: 10.1016/j.cplett.2008.07.065] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
|
11
|
Polák R, Fišer J. Theoretical study of 14N quadrupole coupling constants in some NO-containing complexes: N2O3 and FNO. Chem Phys 2008. [DOI: 10.1016/j.chemphys.2008.03.032] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
|
12
|
Bizzocchi L, Degli Esposti C, Dore L. Sub-Doppler millimetre-wave spectroscopy of DBS and HBS: accurate values of nuclear electric and magnetic hyperfine structure constants. Phys Chem Chem Phys 2008; 10:658-65. [DOI: 10.1039/b710356e] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
|
13
|
Ingels JB, Turney JM, Richardson NA, Yamaguchi Y, Schaefer HF. Characterization of singlet ground and low-lying electronic excited states of phosphaethyne and isophosphaethyne. J Chem Phys 2006; 125:104306. [PMID: 16999525 DOI: 10.1063/1.2222356] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023] Open
Abstract
The singlet ground ((approximate)X(1)Sigma1+) and excited (1Sigma-,1Delta) states of HCP and HPC have been systematically investigated using ab initio molecular electronic structure theory. For the ground state, geometries of the two linear stationary points have been optimized and physical properties have been predicted utilizing restricted self-consistent field theory, coupled cluster theory with single and double excitations (CCSD), CCSD with perturbative triple corrections [CCSD(T)], and CCSD with partial iterative triple excitations (CCSDT-3 and CC3). Physical properties computed for the global minimum ((approximate)X(1)Sigma+HCP) include harmonic vibrational frequencies with the cc-pV5Z CCSD(T) method of omega1=3344 cm(-1), omega2=689 cm(-1), and omega3=1298 cm(-1). Linear HPC, a stationary point of Hessian index 2, is predicted to lie 75.2 kcal mol(-1) above the global minimum HCP. The dissociation energy D0[HCP((approximate)X(1)Sigma+)-->H(2S)+CP(X2Sigma+)] of HCP is predicted to be 119.0 kcal mol(-1), which is very close to the experimental lower limit of 119.1 kcal mol(-1). Eight singlet excited states were examined and their physical properties were determined employing three equation-of-motion coupled cluster methods (EOM-CCSD, EOM-CCSDT-3, and EOM-CC3). Four stationary points were located on the lowest-lying excited state potential energy surface, 1Sigma- -->1A", with excitation energies Te of 101.4 kcal mol(-1) (1A"HCP), 104.6 kcal mol(-1)(1Sigma-HCP), 122.3 kcal mol(-1)(1A" HPC), and 171.6 kcal mol(-1)(1Sigma-HPC) at the cc-pVQZ EOM-CCSDT-3 level of theory. The physical properties of the 1A" state with a predicted bond angle of 129.5 degrees compare well with the experimentally reported first singlet state ((approximate)A1A"). The excitation energy predicted for this excitation is T0=99.4 kcal mol(-1) (34 800 cm(-1),4.31 eV), in essentially perfect agreement with the experimental value of T0=99.3 kcal mol(-1)(34 746 cm(-1),4.308 eV). For the second lowest-lying excited singlet surface, 1Delta-->1A', four stationary points were found with Te values of 111.2 kcal mol(-1) (2(1)A' HCP), 112.4 kcal mol(-1) (1Delta HPC), 125.6 kcal mol(-1)(2(1)A' HCP), and 177.8 kcal mol(-1)(1Delta HPC). The predicted CP bond length and frequencies of the 2(1)A' state with a bond angle of 89.8 degrees (1.707 A, 666 and 979 cm(-1)) compare reasonably well with those for the experimentally reported (approximate)C(1)A' state (1.69 A, 615 and 969 cm(-1)). However, the excitation energy and bond angle do not agree well: theoretical values of 108.7 kcal mol(-1) and 89.8 degrees versus experimental values of 115.1 kcal mol(-1) and 113 degrees. of 115.1 kcal mol(-1) and 113 degrees.
Collapse
Affiliation(s)
- Justin B Ingels
- Center for Computational Chemistry, University of Georgia, Athens, GA 30602, USA
| | | | | | | | | |
Collapse
|
14
|
Puzzarini C, Cazzoli G, Gambi A, Gauss J. Rotational spectra of 1-chloro-2-fluoroethylene. II. Equilibrium structures of the cis and trans isomer. J Chem Phys 2006; 125:054307. [PMID: 16942213 DOI: 10.1063/1.2220041] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Equilibrium structures for the cis and trans isomer of 1-chloro-2-fluoroethylene are reported. The structures are obtained within a least-squares fit procedure using the available experimental ground-state rotational constants for various isotopic species of both forms. Vibrational effects were eliminated before the analysis using vibration-rotation interaction constants derived from computed quadratic and cubic force fields with the required quantum chemical calculations carried out using second-order Moller-Plesset perturbation as well as coupled-cluster (CC) theory. The semiexperimental or empirical equilibrium geometries obtained in this way agree well with the corresponding theoretical predictions obtained from CC calculations [at the CCSD(T) level] after extrapolation to the complete basis-set limit and inclusion of core-valence correlation corrections. The present results allow a detailed analysis of the geometrical differences between the two forms of 1-chloro-2-fluoroethylene. They are also compared to the structural data available for other halogenated ethylenes.
Collapse
Affiliation(s)
- Cristina Puzzarini
- Dipartimento di Chimica G. Ciamician, Università di Bologna, Via Selmi 2, I-40126 Bologna, Italy.
| | | | | | | |
Collapse
|
15
|
Francisco JS. Ab initio study of the structure, bonding, vibrational spectra, and energetics of XBS+ (where X=H, F, and Cl). J Chem Phys 2006; 124:114303. [PMID: 16555884 DOI: 10.1063/1.2176607] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
High level ab initio electronic structure calculations at the CCSD(T) level with augmented correlation-consistent basis set extrapolated to complete basis set limit have been performed on XBS and XBS+ for X=H, F, and Cl. The geometries have been optimized up through the aug-cc-pV5Z level and the vibrational frequencies have been calculated with the aug-cc-pVQZ basis sets. Analysis of the bonding in XBS and XBS+ using natural bond orbital analysis shows that the BS bond in XBS is a triple bond, while in XBS+ it is a double bond. The energetic properties of XBS cation and its first excited state are reported. The calculated adiabatic ionization potential is 11.11+/-0.01 eV as compared to the experimental value of 11.11+/-0.03 eV for HBS. The adiabatic ionization potentials for FBS and CIBS are 10.89+/-0.01 and 10.57+/-0.01 eV, respectively.
Collapse
Affiliation(s)
- Joseph S Francisco
- Department of Chemistry, Purdue University, West Lafayette, Indiana 47907-2084, USA.
| |
Collapse
|
16
|
Coriani S, Marchesan D, Gauss J, Hättig C, Helgaker T, Jørgensen P. The accuracy ofab initiomolecular geometries for systems containing second-row atoms. J Chem Phys 2005; 123:184107. [PMID: 16292899 DOI: 10.1063/1.2104387] [Citation(s) in RCA: 100] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The performance of the standard hierarchy of ab initio models--that is, Hartree-Fock theory, second-order Moller-Plesset theory, coupled-cluster singles-and-doubles theory, and coupled-cluster singles-doubles-approximate-triples theory--in combination with correlation-consistent basis sets is investigated for equilibrium geometries of molecules containing second-row elements. From an analysis on a collection of 31 molecules (yielding statistical samples of 41 bond distances and 13 bond angles), the statistical errors (mean deviation, mean absolute deviation, standard deviation, and maximum absolute deviation) are established at each level of theory. The importance of core correlation is examined by comparing calculations in the frozen-core approximation with calculations where all electrons are correlated.
Collapse
Affiliation(s)
- Sonia Coriani
- Dipartimento di Scienze Chimiche, Università degli Studi di Trieste, via Licio Giorgieri 1, I-34127 Trieste, Italy.
| | | | | | | | | | | |
Collapse
|
17
|
Wilson DJD, Mohn CE, Helgaker T. The Rotational g Tensor as a Benchmark for Density-Functional Theory Calculations of Molecular Magnetic Properties. J Chem Theory Comput 2005; 1:877-88. [DOI: 10.1021/ct050101t] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- David J. D. Wilson
- Department of Chemistry, University of Oslo, P. O. Box 1033 Blindern, N-0315 Oslo, Norway
| | - Chris E. Mohn
- Department of Chemistry, University of Oslo, P. O. Box 1033 Blindern, N-0315 Oslo, Norway
| | - Trygve Helgaker
- Department of Chemistry, University of Oslo, P. O. Box 1033 Blindern, N-0315 Oslo, Norway
| |
Collapse
|
18
|
Puzzarini C, Gambi A, Cazzoli G. An ab initio study of diazirine: equilibrium structure and molecular properties. J Mol Struct 2004. [DOI: 10.1016/j.molstruc.2003.11.030] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
|
19
|
Puzzarini C, Gambi A. Accurate Determination of the Equilibrium and Vibrationally Averaged Structural and Molecular Properties of Difluoromethanimine (F2CNH) from ab Initio Calculations. J Phys Chem A 2004. [DOI: 10.1021/jp049838p] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Cristina Puzzarini
- Dipartimento di Chimica “G. Ciamician”, Università di Bologna, Via Selmi 2, I-40126 Bologna, Italy, and Dipartimento di Scienze e Tecnologie Chimiche, Università di Udine, Via Cotonificio 108, I-33100 Udine, Italy
| | - Alberto Gambi
- Dipartimento di Chimica “G. Ciamician”, Università di Bologna, Via Selmi 2, I-40126 Bologna, Italy, and Dipartimento di Scienze e Tecnologie Chimiche, Università di Udine, Via Cotonificio 108, I-33100 Udine, Italy
| |
Collapse
|