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Chen Q, Hu X, Zhang DD, Chen XW, Wang JH. Selective Isolation of Myosin Subfragment-1 with a DNA-Polyoxovanadate Bioconjugate. Bioconjug Chem 2017; 28:2976-2984. [PMID: 29161498 DOI: 10.1021/acs.bioconjchem.7b00597] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
The bioconjugation of a polyoxometalate (POMs), i.e., dodecavanadate (V12O32), to DNA strands produces a functional labeled DNA primer, V12O32-DNA. The grafting of DNA primer onto streptavidin-coated magnetic nanoparticles (SVM) produces a novel composite, V12O32-DNA@SVM. The high binding-affinity of V12O32 with the ATP binding site in myosin subfragment-1 (S1) facilitates favorable adsorption of myosin, with an efficiency of 99.4% when processing 0.1 mL myosin solution (100 μg mL-1) using 0.1 mg composite. Myosin adsorption fits the Langmuir model, corresponding to a theoretical adsorption capacity of 613.5 mg g-1. The retained myosin is readily recovered by 1% SDS (m/m), giving rise to a recovery of 58.7%. No conformational change is observed for myosin after eliminating SDS by ultrafiltration. For practical use, high-purity myosin S1 is obtained by separation of myosin from the rough protein extract from porcine left ventricle, followed by digestion with α-chymotryptic and further isolation of S1 subfragment. The purified myosin S1 is identified with matrix-assisted laser desorption/ionization time-of-flight/mass spectrometry, giving rise to a sequence coverage of 38%.
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Affiliation(s)
- Qing Chen
- Research Center for Analytical Sciences, Department of Chemistry, College of Sciences, Northeastern University , Box 332, Shenyang 110819, China
| | - Xue Hu
- Research Center for Analytical Sciences, Department of Chemistry, College of Sciences, Northeastern University , Box 332, Shenyang 110819, China
| | - Dan-Dan Zhang
- Research Center for Analytical Sciences, Department of Chemistry, College of Sciences, Northeastern University , Box 332, Shenyang 110819, China
| | - Xu-Wei Chen
- Research Center for Analytical Sciences, Department of Chemistry, College of Sciences, Northeastern University , Box 332, Shenyang 110819, China
| | - Jian-Hua Wang
- Research Center for Analytical Sciences, Department of Chemistry, College of Sciences, Northeastern University , Box 332, Shenyang 110819, China
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Wang Y, Yuan Q, Xu H, Zhu X, Gan W. Metal dependent motif transition in a self-assembled monolayer of bipyridine derivatives via coordination: An STM study. J Chem Phys 2016; 145:034701. [PMID: 27448898 DOI: 10.1063/1.4958802] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Low-dimensional molecular motifs with diversity developed via the on-surface chemistry are attracting growing interest for their potential in advanced nanofabrication. In this work, scanning tunneling microscopy was employed to investigate the in situ and ex situ metal coordinations between 4,4'-ditetradecyl-2,2'-bipyridine (bpy) and Zn(ii) or Cu(ii) ions at a highly oriented pyrolytic graphite (HOPG)/1-phenyloctane interface under ambient conditions. The results demonstrate that the bpy adopts a flat-lying orientation with its substituted alkyl chains in a tail-to-tail arrangement in a bpy monolayer. For the in situ coordination, the bpy/Zn(ii) and bpy/Cu(ii) complexes are aligned in edge-on fashions, wherein the bpy stands vertically on the HOPG surface and interdigitates at the alkyl chains. In the two-dimensional arrays of ex situ coordinated complexes, metal dependent motifs have been observed with Zn(ii) and Cu(ii), wherein the bipyridine moieties are parallel to the graphite surface. These results suggest that the desired on-surface coordination architectures may be achieved by the intentional selection of the metal centers.
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Affiliation(s)
- Yi Wang
- Laboratory of Environmental Science and Technology, The Xinjiang Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Urumqi 830011, China and Key Laboratory of Functional Materials and Devices for Special Environments, Chinese Academy of Sciences, Urumqi 830011, China
| | - Qunhui Yuan
- Laboratory of Environmental Science and Technology, The Xinjiang Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Urumqi 830011, China and Key Laboratory of Functional Materials and Devices for Special Environments, Chinese Academy of Sciences, Urumqi 830011, China
| | - Hongbo Xu
- Laboratory of Environmental Science and Technology, The Xinjiang Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Urumqi 830011, China and Key Laboratory of Functional Materials and Devices for Special Environments, Chinese Academy of Sciences, Urumqi 830011, China
| | - Xuefeng Zhu
- Laboratory of Environmental Science and Technology, The Xinjiang Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Urumqi 830011, China and Key Laboratory of Functional Materials and Devices for Special Environments, Chinese Academy of Sciences, Urumqi 830011, China
| | - Wei Gan
- Laboratory of Environmental Science and Technology, The Xinjiang Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Urumqi 830011, China and Key Laboratory of Functional Materials and Devices for Special Environments, Chinese Academy of Sciences, Urumqi 830011, China
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Sang YM, Yan LK, Ma NN, Wang JP, Su ZM. TDDFT Studies on the Determination of the Absolute Configurations and Chiroptical Properties of Strandberg-Type Polyoxometalates. J Phys Chem A 2013; 117:2492-8. [DOI: 10.1021/jp400506z] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Affiliation(s)
- Yuan-Mei Sang
- Institute of Functional Material Chemistry, Faculty
of Chemistry, Northeast Normal University, Changchun 130024, P. R.
China
| | - Li-Kai Yan
- Institute of Functional Material Chemistry, Faculty
of Chemistry, Northeast Normal University, Changchun 130024, P. R.
China
| | - Na-Na Ma
- Institute of Functional Material Chemistry, Faculty
of Chemistry, Northeast Normal University, Changchun 130024, P. R.
China
| | - Jian-Ping Wang
- Institute of Functional Material Chemistry, Faculty
of Chemistry, Northeast Normal University, Changchun 130024, P. R.
China
| | - Zhong-Min Su
- Institute of Functional Material Chemistry, Faculty
of Chemistry, Northeast Normal University, Changchun 130024, P. R.
China
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Novel building units in the construction of materials of the oxomolybdate–organodiphosphonate/copper(II)–dipodal-organonitrogen ligand system: Structural influences of dipodal ligand tether length and flexibility. Inorganica Chim Acta 2012. [DOI: 10.1016/j.ica.2012.01.011] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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Liu D, Tan HQ, Chen WL, Li YG, Wang EB. Resolution of chiral polyoxoanion [P2Mo18O62]6− with histidine. CrystEngComm 2010. [DOI: 10.1039/c001160f] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Katagiri K, Ikeda T, Muranaka A, Uchiyama M, Tominaga M, Azumaya I. Synthesis and chiral discrimination of cyclic aromatic amides and the determination of their absolute configuration by TD-DFT calculations. ACTA ACUST UNITED AC 2009. [DOI: 10.1016/j.tetasy.2009.10.032] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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7
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From Racemic Compound to Spontaneous Resolution: A Linker-Imposed Evolution of Chiral [MnMo9O32]6−-Based Polyoxometalate Compounds. Chemistry 2009; 15:10940-7. [DOI: 10.1002/chem.200901112] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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Katagiri K, Tohaya T, Masu H, Tominaga M, Azumaya I. Effect of Aromatic−Aromatic Interactions on the Conformational Stabilities of Macrocycle and Preorganized Structure during Macrocyclization. J Org Chem 2009; 74:2804-10. [DOI: 10.1021/jo802801n] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Kosuke Katagiri
- Faculty of Pharmaceutical Sciences at Kagawa Campus, Tokushima Bunri University,1314-1 Shido, Sanuki, Kagawa 769-2193, Japan
| | - Taichi Tohaya
- Faculty of Pharmaceutical Sciences at Kagawa Campus, Tokushima Bunri University,1314-1 Shido, Sanuki, Kagawa 769-2193, Japan
| | - Hyuma Masu
- Faculty of Pharmaceutical Sciences at Kagawa Campus, Tokushima Bunri University,1314-1 Shido, Sanuki, Kagawa 769-2193, Japan
| | - Masahide Tominaga
- Faculty of Pharmaceutical Sciences at Kagawa Campus, Tokushima Bunri University,1314-1 Shido, Sanuki, Kagawa 769-2193, Japan
| | - Isao Azumaya
- Faculty of Pharmaceutical Sciences at Kagawa Campus, Tokushima Bunri University,1314-1 Shido, Sanuki, Kagawa 769-2193, Japan
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Alencar WS, Crespilho FN, Martins MVA, Zucolotto V, Oliveira, Jr ON, Silva WC. Synergistic interaction between gold nanoparticles and nickel phthalocyanine in layer-by-layer (LbL) films: evidence of constitutional dynamic chemistry (CDC). Phys Chem Chem Phys 2009; 11:5086-91. [DOI: 10.1039/b821915j] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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