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Zhu S, Zhu S, Xing F. Anthraquinone-1,8-Derived (Pseudo-) Crown and Lariat Ethers: Design and Applications as Fluorescent and Chromogenic Ion (Pair) Sensors. Chem Asian J 2022; 17:e202200564. [PMID: 35763343 DOI: 10.1002/asia.202200564] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2022] [Revised: 06/23/2022] [Indexed: 11/09/2022]
Abstract
Cyclic polyamine/ethers embedded with anthraquinone moieties and functional pendants, are structural analogues of crown ethers and (oxo-) cyclams, and could be utilized as sensitive and selective chemosensors towards metal cations. Those pseudo- (similar but geometrically distinct) crown and lariat ethers show various cation-binding patterns and stoichiometry, being modulated by donor type, cavity size and pendants' chelating ability. The luminescent and chromogenic properties also differ a lot along with the derivation of the parental macrocycle. Methodological designing including synthesis and post-functionalization through nucleophilic substitution, Mannich condensation etc., as well as the sensing performance of those pseudo- crown and lariat ethers are summarized in this review, basing on the spectroscopic, voltammetric and X-ray crystallographic determinations. Anion effect in sensing cations is evaluated according to the ion-pair recognition theory. Those results shed some light on exemplifying the anions' role in bioinorganic systems including metalloenzymes.
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Affiliation(s)
- Shouzhe Zhu
- Shanghai University, Department of Chemistry, 99 Shangda Rd., 200444, Shanghai, CHINA
| | - Shourong Zhu
- Shanghai University, Department of Chemistry, 99 Shangda Rd., 200444, Shanghai, CHINA
| | - Feifei Xing
- Shanghai University, College of Science, No.99 Shangda Road, 200444, Shanghai, CHINA
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Hahn DF, Milić JV, Hünenberger PH. Vase
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Kite
Equilibrium of Resorcin[4]arene Cavitands Investigated Using Molecular Dynamics Simulations with Ball‐and‐Stick Local Elevation Umbrella Sampling. Helv Chim Acta 2019. [DOI: 10.1002/hlca.201900060] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- David F. Hahn
- Laboratory of Physical Chemistry, Department of Chemistry and Applied BiosciencesETH Zürich Vladimir-Prelog-Weg 2 CH-8093 Zürich Switzerland
| | - Jovana V. Milić
- Laboratory of Photonics and InterfacesÉcole Polytechnique Fédérale de Lausanne, EPFL SB ISIC LPI, Station 6 CH-1015 Lausanne Switzerland
| | - Philippe H. Hünenberger
- Laboratory of Physical Chemistry, Department of Chemistry and Applied BiosciencesETH Zürich Vladimir-Prelog-Weg 2 CH-8093 Zürich Switzerland
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Abstract
Cation and anion recognition have both played central roles in the development of supramolecular chemistry. Much of the associated research has focused on the development of receptors for individual cations or anions, as well as their applications in different areas. Rarely is complexation of the counterions considered. In contrast, ion pair recognition chemistry, emerging from cation and anion coordination chemistry, is a specific research field where co-complexation of both anions and cations, so-called ion pairs, is the center of focus. Systems used for the purpose, known as ion pair receptors, are typically di- or polytopic hosts that contain recognition sites for both cations and anions and which permit the concurrent binding of multiple ions. The field of ion pair recognition has blossomed during the past decades. Several smaller reviews on the topic were published roughly 5 years ago. They provided a summary of synthetic progress and detailed the various limiting ion recognition modes displayed by both acyclic and macrocyclic ion pair receptors known at the time. The present review is designed to provide a comprehensive and up-to-date overview of the chemistry of macrocycle-based ion pair receptors. We specifically focus on the relationship between structure and ion pair recognition, as well as applications of ion pair receptors in sensor development, cation and anion extraction, ion transport, and logic gate construction.
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Affiliation(s)
- Qing He
- Department of Chemistry , The University of Texas at Austin , Austin , Texas 78712 , United States.,State Key Laboratory of Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering , Hunan University , Changsha 410082 , P. R. China
| | - Gabriela I Vargas-Zúñiga
- Department of Chemistry , The University of Texas at Austin , Austin , Texas 78712 , United States
| | - Seung Hyun Kim
- Department of Chemistry and Research Institute of Natural Science , Gyeongsang National University , Jinju , 660-701 , Korea
| | - Sung Kuk Kim
- Department of Chemistry and Research Institute of Natural Science , Gyeongsang National University , Jinju , 660-701 , Korea
| | - Jonathan L Sessler
- Institute for Supramolecular Chemistry and Catalysis , Shanghai University , Shanghai 200444 , P.R. China.,Department of Chemistry , The University of Texas at Austin , Austin , Texas 78712 , United States
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Zuo W, Jia C, Zhang H, Zhao Y, Yang XJ, Wu B. Selective recognition of choline phosphate by tripodal hexa-urea receptors with dual binding sites: crystal and solution evidence. Chem Sci 2019; 10:2483-2488. [PMID: 30881678 PMCID: PMC6385852 DOI: 10.1039/c8sc04338h] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2018] [Accepted: 12/26/2018] [Indexed: 11/21/2022] Open
Abstract
Two tripodal hexa-urea receptors functionalized with aromatic terminal groups are capable of binding choline phosphate (CP). Crystal structures of the host-guest complexes reveal that the zwitterion CP is efficiently encapsulated in the tripodal hosts in a dual-site binding mode. The phosphate tail of CP is coordinated by the urea groups and the quaternary ammonium head is bound in a 'composite aromatic box' through cation-π and hydrogen-bonding interactions. Such a partial aromatic binding environment for the Me3N-+ cation mimics that of most enzymes catalyzing the conversion of quaternary ammonium substrates. Moreover, NMR, ESI-MS, and fluorescence studies demonstrate the selective binding and sensing of CP over other competing species such as ADP, ATP, choline and derivatives.
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Affiliation(s)
- Wei Zuo
- Key Laboratory of Synthetic and Natural Functional Molecule Chemistry of the Ministry of Education , College of Chemistry and Materials Science , Northwest University , Xi'an 710069 , China . ;
| | - Chuandong Jia
- Key Laboratory of Synthetic and Natural Functional Molecule Chemistry of the Ministry of Education , College of Chemistry and Materials Science , Northwest University , Xi'an 710069 , China . ;
| | - Huizheng Zhang
- Key Laboratory of Synthetic and Natural Functional Molecule Chemistry of the Ministry of Education , College of Chemistry and Materials Science , Northwest University , Xi'an 710069 , China . ;
| | - Yanxia Zhao
- Key Laboratory of Synthetic and Natural Functional Molecule Chemistry of the Ministry of Education , College of Chemistry and Materials Science , Northwest University , Xi'an 710069 , China . ;
| | - Xiao-Juan Yang
- Key Laboratory of Synthetic and Natural Functional Molecule Chemistry of the Ministry of Education , College of Chemistry and Materials Science , Northwest University , Xi'an 710069 , China . ;
| | - Biao Wu
- Key Laboratory of Synthetic and Natural Functional Molecule Chemistry of the Ministry of Education , College of Chemistry and Materials Science , Northwest University , Xi'an 710069 , China . ;
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Brunetti E, Moerkerke S, Wouters J, Bartik K, Jabin I. A selective calix[6]arene-based fluorescent chemosensor for phosphatidylcholine type lipids. Org Biomol Chem 2018; 14:10201-10207. [PMID: 27731470 DOI: 10.1039/c6ob01880g] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
The development of chemosensors that can selectively detect phosphatidylcholines (PCs) in biological samples is of medical relevance considering the importance of these phospholipids in cell growth and survival. Their selective sensing over phosphatidylethanolamines (PEs) is however a challenging task. We report here on the chemosensing capacities of calix[6]tris-pyrenylurea 1, which is able to selectively interact with phosphatidylcholine-type lipids in organic media. Host 1 also binds them in a biphasic chloroform/water solution, opening the way to the design of selective chemosensors for these lipids in biological media. The results obtained by NMR, fluorescence spectroscopy and modelling studies show that the selectivity is the result of the high degree of complementarity between the lipids' zwitterionic phosphatidylcholine headgroup and the receptor's H-bonding donor site and hydrophobic pocket. The mode of recognition is reminiscent of natural systems, such as human phosphatidylcholine transfer proteins (PC-TPs), validating the biomimetic approach adopted in our work.
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Affiliation(s)
- Emilio Brunetti
- Laboratoire de Chimie Organique, Université libre de Bruxelles (ULB), Avenue F.D. Roosevelt 50, CP160/06, B-1050 Brussels, Belgium. and Engineering of Molecular NanoSystems, Ecole polytechnique de Bruxelles, Université libre de Bruxelles (ULB), Avenue F.D. Roosevelt 50, CP165/64, B-1050 Brussels, Belgium.
| | - Steven Moerkerke
- Laboratoire de Chimie Organique, Université libre de Bruxelles (ULB), Avenue F.D. Roosevelt 50, CP160/06, B-1050 Brussels, Belgium.
| | - Johan Wouters
- Département de Chimie, Université de Namur (UNamur), Rue de Bruxelles 61, B5-5000 Namur, Belgium
| | - Kristin Bartik
- Engineering of Molecular NanoSystems, Ecole polytechnique de Bruxelles, Université libre de Bruxelles (ULB), Avenue F.D. Roosevelt 50, CP165/64, B-1050 Brussels, Belgium.
| | - Ivan Jabin
- Laboratoire de Chimie Organique, Université libre de Bruxelles (ULB), Avenue F.D. Roosevelt 50, CP160/06, B-1050 Brussels, Belgium.
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Salvio R, Volpi S, Cacciapaglia R, Sansone F, Mandolini L, Casnati A. Phosphoryl Transfer Processes Promoted by a Trifunctional Calix[4]arene Inspired by DNA Topoisomerase I. J Org Chem 2016; 81:9012-9019. [DOI: 10.1021/acs.joc.6b01643] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Affiliation(s)
- Riccardo Salvio
- Dipartimento
di Chimica and IMC - CNR Sezione Meccanismi di Reazione, Universitá La Sapienza, 00185 Rome, Italy
| | - Stefano Volpi
- Dipartimento
di Chimica, Universitá degli Studi di Parma, Viale delle
Scienze 17/A, 43124 Parma, Italy
| | - Roberta Cacciapaglia
- Dipartimento
di Chimica and IMC - CNR Sezione Meccanismi di Reazione, Universitá La Sapienza, 00185 Rome, Italy
| | - Francesco Sansone
- Dipartimento
di Chimica, Universitá degli Studi di Parma, Viale delle
Scienze 17/A, 43124 Parma, Italy
| | - Luigi Mandolini
- Dipartimento
di Chimica and IMC - CNR Sezione Meccanismi di Reazione, Universitá La Sapienza, 00185 Rome, Italy
| | - Alessandro Casnati
- Dipartimento
di Chimica, Universitá degli Studi di Parma, Viale delle
Scienze 17/A, 43124 Parma, Italy
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Salvio R, Volpi S, Cacciapaglia R, Sansone F, Mandolini L, Casnati A. Upper Rim Bifunctional cone-Calix[4]arenes Based on a Ligated Metal Ion and a Guanidinium Unit as DNAase and RNAase Mimics. J Org Chem 2016; 81:4728-35. [DOI: 10.1021/acs.joc.6b00644] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Riccardo Salvio
- Dipartimento
di Chimica and IMC - CNR Sezione Meccanismi di Reazione, Università La Sapienza, 00185 Roma, Italy
| | - Stefano Volpi
- Dipartimento
di Chimica, Università degli Studi di Parma, Parco Area
delle Scienze 17/a, 43124 Parma, Italy
| | - Roberta Cacciapaglia
- Dipartimento
di Chimica and IMC - CNR Sezione Meccanismi di Reazione, Università La Sapienza, 00185 Roma, Italy
| | - Francesco Sansone
- Dipartimento
di Chimica, Università degli Studi di Parma, Parco Area
delle Scienze 17/a, 43124 Parma, Italy
| | - Luigi Mandolini
- Dipartimento
di Chimica and IMC - CNR Sezione Meccanismi di Reazione, Università La Sapienza, 00185 Roma, Italy
| | - Alessandro Casnati
- Dipartimento
di Chimica, Università degli Studi di Parma, Parco Area
delle Scienze 17/a, 43124 Parma, Italy
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Lascaux A, Leener GD, Fusaro L, Topić F, Rissanen K, Luhmer M, Jabin I. Selective recognition of neutral guests in an aqueous medium by a biomimetic calix[6]cryptamide receptor. Org Biomol Chem 2016; 14:738-746. [DOI: 10.1039/c5ob02067k] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A hydrophilic calix[6]cryptamide decorated with oligo(ethylene glycol) units was synthesized. This compound behaves as a biomimetic receptor for neutral guests in an aqueous medium.
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Affiliation(s)
- Angélique Lascaux
- Laboratoire de Chimie Organique
- Université libre de Bruxelles (ULB)
- B-1050 Brussels
- Belgium
| | - Gaël De Leener
- Laboratoire de Chimie Organique
- Université libre de Bruxelles (ULB)
- B-1050 Brussels
- Belgium
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques
| | - Luca Fusaro
- Laboratoire de Résonance Magnétique Nucléaire Haute Résolution
- Université libre de Bruxelles (ULB)
- B-1050 Brussels
- Belgium
- Unité de Chimie des Nanomatériaux (CNANO)
| | - Filip Topić
- University of Jyvaskyla
- Department of Chemistry
- Finland
| | - Kari Rissanen
- University of Jyvaskyla
- Department of Chemistry
- Finland
| | - Michel Luhmer
- Laboratoire de Résonance Magnétique Nucléaire Haute Résolution
- Université libre de Bruxelles (ULB)
- B-1050 Brussels
- Belgium
| | - Ivan Jabin
- Laboratoire de Chimie Organique
- Université libre de Bruxelles (ULB)
- B-1050 Brussels
- Belgium
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10
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Moerkerke S, Wouters J, Jabin I. Selective Recognition of Phosphatidylcholine Lipids by a Biomimetic Calix[6]tube Receptor. J Org Chem 2015; 80:8720-6. [DOI: 10.1021/acs.joc.5b01531] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Affiliation(s)
- Steven Moerkerke
- Laboratoire
de Chimie Organique, Université Libre de Bruxelles (ULB), Avenue
F. D. Roosevelt 50, CP160/06, B-1050 Brussels, Belgium
| | - Johan Wouters
- Département
de Chimie, Université de Namur (UNamur), Rue de Bruxelles 61, B-5000 Namur, Belgium
| | - Ivan Jabin
- Laboratoire
de Chimie Organique, Université Libre de Bruxelles (ULB), Avenue
F. D. Roosevelt 50, CP160/06, B-1050 Brussels, Belgium
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Raynal M, Ballester P, Vidal-Ferran A, van Leeuwen PWNM. Supramolecular catalysis. Part 2: artificial enzyme mimics. Chem Soc Rev 2013; 43:1734-87. [PMID: 24365792 DOI: 10.1039/c3cs60037h] [Citation(s) in RCA: 665] [Impact Index Per Article: 60.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
The design of artificial catalysts able to compete with the catalytic proficiency of enzymes is an intense subject of research. Non-covalent interactions are thought to be involved in several properties of enzymatic catalysis, notably (i) the confinement of the substrates and the active site within a catalytic pocket, (ii) the creation of a hydrophobic pocket in water, (iii) self-replication properties and (iv) allosteric properties. The origins of the enhanced rates and high catalytic selectivities associated with these properties are still a matter of debate. Stabilisation of the transition state and favourable conformations of the active site and the product(s) are probably part of the answer. We present here artificial catalysts and biomacromolecule hybrid catalysts which constitute good models towards the development of truly competitive artificial enzymes.
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Affiliation(s)
- Matthieu Raynal
- Institute of Chemical Research of Catalonia (ICIQ), Av. Països Catalans 16, 43007 Tarragona, Spain.
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Frischmann PD, MacLachlan MJ. Metallocavitands: an emerging class of functional multimetallic host molecules. Chem Soc Rev 2013. [DOI: 10.1039/c2cs35337g] [Citation(s) in RCA: 135] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
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Frischmann PD, Mehr SHM, Patrick BO, Lelj F, MacLachlan MJ. Role of Entropy and Autosolvation in Dimerization and Complexation of C60 by Zn7 Metallocavitands. Inorg Chem 2012; 51:3443-53. [DOI: 10.1021/ic202049t] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Peter D. Frischmann
- Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, British
Columbia, Canada V6T 1Z1
| | - S. Hessam M. Mehr
- Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, British
Columbia, Canada V6T 1Z1
| | - Brian O. Patrick
- Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, British
Columbia, Canada V6T 1Z1
| | - Francesco Lelj
- La.M.I. and LaSCAMM INSTM Sezione Basilicata, Dipartimento di Chimica, Università della Basilicata, via dell’Ateneo
Lucano 10, 85100 Potenza, Italy
| | - Mark J. MacLachlan
- Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, British
Columbia, Canada V6T 1Z1
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Cai YB, Zhan J, Hai Y, Zhang JL. Molecular Assembly Directed by Metal-Aromatic Interactions: Control of the Aggregation and Photophysical Properties of Zn-Salen Complexes by Aromatic Mercuration. Chemistry 2012; 18:4242-9. [DOI: 10.1002/chem.201103332] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2011] [Indexed: 12/20/2022]
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Jankolovits J, Lim CS, Mezei G, Kampf JW, Pecoraro VL. Influencing the Size and Anion Selectivity of Dimeric Ln3+[15-Metallacrown-5] Compartments through Systematic Variation of the Host Side Chains and Central Metal. Inorg Chem 2012; 51:4527-38. [DOI: 10.1021/ic202347j] [Citation(s) in RCA: 51] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Affiliation(s)
- Joseph Jankolovits
- Department of Chemistry, University of Michigan, Ann Arbor, 930 North University Avenue, Ann
Arbor, Michigan 48109, United States
| | - Choong-Sun Lim
- Department of Chemistry, University of Michigan, Ann Arbor, 930 North University Avenue, Ann
Arbor, Michigan 48109, United States
| | - Gellert Mezei
- Department of Chemistry, University of Michigan, Ann Arbor, 930 North University Avenue, Ann
Arbor, Michigan 48109, United States
| | - Jeff W. Kampf
- Department of Chemistry, University of Michigan, Ann Arbor, 930 North University Avenue, Ann
Arbor, Michigan 48109, United States
| | - Vincent L. Pecoraro
- Department of Chemistry, University of Michigan, Ann Arbor, 930 North University Avenue, Ann
Arbor, Michigan 48109, United States
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