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Zhu X, Yi Y, Fan Z, Liu R, Chu X, Wang M, Zhang J, Tretyakova E, Zhang Y, Zhang L, Zhou D, Xiao S. Novel mono- and multivalent N-acetylneuraminic acid glycoclusters as potential broad-spectrum entry inhibitors for influenza and coronavirus infection. Eur J Med Chem 2023; 260:115723. [PMID: 37595545 DOI: 10.1016/j.ejmech.2023.115723] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2023] [Revised: 06/19/2023] [Accepted: 08/12/2023] [Indexed: 08/20/2023]
Abstract
N-acetylneuraminic acid (Neu5Ac) is a glycan receptor of viruses spread in many eukaryotic cells. The present work aimed to design, synthesis and biological evaluation of a panel of Neu5Ac derivatives based on a cyclodextrin (CD) scaffold for targeting influenza and coronavirus membrane proteins. The multivalent Neu5Ac glycoclusters efficiently inhibited chicken erythrocyte agglutination induced by intact influenza virus in a Neu5Ac density-dependent fashion. Compared with inhibition by Neu5Ac, the multivalent inhibitor with 21 Neu5Ac residues on the primary face of the β-CD scaffold afforded 1788-fold higher binding affinity inhibition for influenza virus hemagglutinin with a dissociation constant (KD) of 3.87 × 10-7 M. It showed moderate binding affinity to influenza virus neuraminidase, but with only about one-thirtieth the potency of that with the HA protein. It also exhibited strong binding affinity to the spike protein of three human coronaviruses (severe acute respiratory syndrome coronavirus, Middle East respiratory syndrome coronavirus, and severe acute respiratory syndrome coronavirus 2), with KD values in the low micromolar range, which is about 10-time weaker than that of HA. Therefore, these multivalent sialylated CD derivatives have possible therapeutic application as broad-spectrum antiviral entry inhibitors for many viruses by targeting the Neu5Ac of host cells.
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Affiliation(s)
- Xingxing Zhu
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Beijing, 100191, China
| | - Yanliang Yi
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Beijing, 100191, China
| | - Zibo Fan
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Beijing, 100191, China
| | - Ruiwen Liu
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Beijing, 100191, China
| | - Xindang Chu
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Beijing, 100191, China
| | - Mengyang Wang
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Beijing, 100191, China
| | - Jiayi Zhang
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Beijing, 100191, China
| | - Elena Tretyakova
- Ufa Institute of Chemistry UFRC RAS, Pr. Oktyabrya 71, 450054, Ufa, Russian Federation
| | - Yongmin Zhang
- Sorbonne Université, CNRS, Institut Parisien de Chimie Moléculaire, UMR 8232, 4 Place Jussieu, 75005, Paris, France
| | - Lihe Zhang
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Beijing, 100191, China
| | - Demin Zhou
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Beijing, 100191, China; Institute of Chemical Biology, Shenzhen Bay Laboratory, Shenzhen, 518132, China; Ningbo Institute of Marine Medicine, Peking University, Ningbo, 315010, China
| | - Sulong Xiao
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Beijing, 100191, China; Institute of Chemical Biology, Shenzhen Bay Laboratory, Shenzhen, 518132, China; Ningbo Institute of Marine Medicine, Peking University, Ningbo, 315010, China.
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Lebedinskiy K, Jindřich J. Preparation of 6-Monohalo-β-cyclodextrin Derivatives with Selectively Methylated Rims via Diazonium Salts. ACS OMEGA 2023; 8:28268-28276. [PMID: 37576619 PMCID: PMC10413458 DOI: 10.1021/acsomega.3c01950] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/23/2023] [Accepted: 07/14/2023] [Indexed: 08/15/2023]
Abstract
A series of 6-monohalo (Cl, Br, and I) β-cyclodextrin derivatives with various types of methylations were synthesized via a diazotization/nucleophilic displacement reaction from the corresponding methylated cyclodextrin amines. All four starting compounds (6A-amino-6A-deoxy derivatives of native β-CD, per-6-O-methyl-, per-2,3-O-methyl-, and per-2,3,6-O-methyl-β-CD) were found to have different reactivities under the same reaction conditions. Unsubstituted and fully per-O-methylated cyclodextrin amines undergo fast transformation, giving lower yields of the monohalogenated product. The selectively methylated cyclodextrin amines react remarkably slower and provide almost complete conversion into the desired monohalogenated compound. A pure product was, in several cases, successfully isolated with simple purification techniques (extraction and precipitation), allowing large-scale preparations. This new method opens the way for preparing poorly investigated monofunctionalized selectively methylated cyclodextrins.
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Affiliation(s)
- Konstantin Lebedinskiy
- Department of Organic Chemistry,
Faculty of Science, Charles University, Hlavova 8, CZ-128 43 Prague, Czech Republic
| | - Jindřich Jindřich
- Department of Organic Chemistry,
Faculty of Science, Charles University, Hlavova 8, CZ-128 43 Prague, Czech Republic
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Lebedinskiy K, Lobaz V, Jindřich J. Preparation of β-cyclodextrin-based dimers with selectively methylated rims and their use for solubilization of tetracene. Beilstein J Org Chem 2022; 18:1596-1606. [PMID: 36530532 PMCID: PMC9704020 DOI: 10.3762/bjoc.18.170] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2022] [Accepted: 11/08/2022] [Indexed: 08/15/2023] Open
Abstract
A series of β-cyclodextrin dimers selectively permethylated on the primary or secondary rim with two different types of spacers have been synthesized effectively utilizing conventional and newly developed methods. Their structure analyses by 1H NMR and NOESY NMR imply the dependence of molecular symmetry on the type of spacer. The ability of synthesized dimers to increase the solubility of tetracene in DMSO was evaluated and compared to native cyclodextrins and their methylated derivatives. The newly synthesized compounds expressed better effectiveness than other tested supramolecular hosts.
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Affiliation(s)
- Konstantin Lebedinskiy
- Department of Organic Chemistry, Faculty of Science, Charles University, Hlavova 8, 128 43 Prague, Czech Republic
| | - Volodymyr Lobaz
- Institute of Macromolecular Chemistry, Department of Supramolecular Systems and Self-Assembling Processes, Heyrovského nám. 2, 162 06 Prague, Czech Republic
| | - Jindřich Jindřich
- Department of Organic Chemistry, Faculty of Science, Charles University, Hlavova 8, 128 43 Prague, Czech Republic
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Couturier C, Dumarcay-Charbonnier F, Lambert A, Barth D, Marsura A. Capped guanidino-α-cyclodextrin first synthesis based on intramolecular Staudinger-Aza-Wittig (SAW) reaction. ANNALES PHARMACEUTIQUES FRANÇAISES 2014; 72:422-8. [PMID: 25438653 DOI: 10.1016/j.pharma.2014.06.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2014] [Revised: 06/11/2014] [Accepted: 06/13/2014] [Indexed: 10/25/2022]
Abstract
An intramolecularly promoted SAW reaction between a phosphinimide and an isocyanate intermediate led to an original bridged trisubstituted ((A,C),E)-α-cyclodextrin. The latter was in a second step converted into a new capped (ACE)-(guanidino)-α-cyclodextrin.
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Affiliation(s)
- C Couturier
- Université de Lorraine, Laboratoire Réactions et Génie des procédés, UMR CNRS 7274, 54001 Nancy, France; Université de Lorraine, Laboratoire Structure et Réactivité des Systèmes Moléculaires Complexes, UMR CNRS 7565, Nancy, France.
| | - F Dumarcay-Charbonnier
- Université de Lorraine, Laboratoire Structure et Réactivité des Systèmes Moléculaires Complexes, UMR CNRS 7565, Nancy, France
| | - A Lambert
- Université de Lorraine, Laboratoire Structure et Réactivité des Systèmes Moléculaires Complexes, UMR CNRS 7565, Nancy, France
| | - D Barth
- Université de Lorraine, Laboratoire Réactions et Génie des procédés, UMR CNRS 7274, 54001 Nancy, France
| | - A Marsura
- Université de Lorraine, Laboratoire Structure et Réactivité des Systèmes Moléculaires Complexes, UMR CNRS 7565, Nancy, France.
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Li W, Huang D, Lv Y. Theoretical Investigations on the Mechanism of Dual 1,3-Dipolar Cycloaddition of CO2 with Isocyanides and Alkynes. J Org Chem 2014; 79:10811-9. [DOI: 10.1021/jo5017053] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Affiliation(s)
- Weiyi Li
- School
of Physics and Chemistry, Research Center for Advanced Computation, Xihua University, Chengdu, Sichuan 610039, People’s Republic of China
| | - Dongfeng Huang
- College
of Chemistry and Chemical Engineering, Anyang Normal University, Anyang, Henan 455000, People’s Republic of China
| | - Yajing Lv
- School
of Physics and Chemistry, Research Center for Advanced Computation, Xihua University, Chengdu, Sichuan 610039, People’s Republic of China
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Porwanski S, Dumarcay-Charbonnier F, Menuel S, Joly JP, Bulach V, Marsura A. Bis-β-cyclodextrinyl- and bis-cellobiosyl-diazacrowns: synthesis and molecular complexation behaviors toward Busulfan anticancer agent and two basic aminoacids. Tetrahedron 2009. [DOI: 10.1016/j.tet.2009.05.057] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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