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Jeyaraman Selvaraj N, Sathya U, Gomathi S, Jegan Jennifer S, Mathivathanan L, Abdul Razak I. Synthesis, crystal structure determination and Hirshfeld surface analysis of three new salt forms of creatinine with hydrobromic acid, 3-aminobenzoic acid and 3,5-dinitrobenzoic acid. ACTA CRYSTALLOGRAPHICA SECTION C STRUCTURAL CHEMISTRY 2022; 78:437-448. [DOI: 10.1107/s2053229622006684] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/03/2022] [Accepted: 06/28/2022] [Indexed: 11/10/2022]
Abstract
Creatinine, a biologically important compound, is used to analyze kidney function and kidney diseases in the human body. The salt form of creatinine is used in the formation of drug materials like anti-HIV, antifungal, antiprotozoal, antiviral and antitumour compounds. Here we report the solid-state structures of three new crystalline salts, namely, creatininium (2-amino-1-methyl-4-oxo-4,5-dihydro-1H-imidazol-3-ium) bromide, C4H8N3O+·Br−, (I), creatininium 3-aminobenzoate, C4H8N3O+·C7H6NO2
−, (II), and creatininium 3,5-dinitrobenzoate, C4H8N3O+·C7H3N2O6
−, (III). These salts have been synthesized and characterized by single-crystal X-ray diffraction and Hirshfeld surface analysis. The structural chemistry of salts (I)–(III) and their crystal packing are discussed in detail. The primary interaction between the creatinine cation and the acid anion in the three salts is N—H...Br/O hydrogen bonds. In salt (I), the creatinine cation and bromide anion are connected through a pair of N—H...Br hydrogen bonds forming R
4
2(8) and R
4
2(12) ring motifs. In salts (II) and (III), the creatinine cation interacts with the corresponding anion via a pair of N—H...O hydrogen bonds. The crystal structure is further stabilized by C—H...O and O—H...O hydrogen bonds with the ring motifs R
2
2(8), R
2
1(7) and R
2
1(6). Furthermore, the crystal structures are stabilized by π–π, C—H...π, C—O...π and N—O...π stacking interactions. The contributions made by each hydrogen bond in maintaining the crystal structure stability has been quantified by Hirshfeld surface analysis.
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Matheswari PP, Asha RN, Bhuvanesh N, Nayagam BRD. Synthesis, structure, Hirshfeld surface, DFT, and molecular docking studies of a new organic cocrystal: creatinine:2,3‐pyridinedicarboxylic acid. J PHYS ORG CHEM 2021. [DOI: 10.1002/poc.4247] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- P. Pon Matheswari
- Department of Chemistry and Research Centre Pope's College (Autonomous), Affiliated to Manonmaniam Sundaranar University Tirunelveli Tamil Nadu India
| | - R. Nandini Asha
- Department of Chemistry and Research Centre Pope's College (Autonomous), Affiliated to Manonmaniam Sundaranar University Tirunelveli Tamil Nadu India
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Jana S, Prajapati S, Suryavanshi KK, Goswami S, Parida R, Giri S. Creatinine recognition using designed synthetic receptors. J PHYS ORG CHEM 2020. [DOI: 10.1002/poc.4066] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Subrata Jana
- Department of ChemistryIndira Gandhi National Tribal University (Central University) Amarkantak Madhya Pradesh India
| | - Sunita Prajapati
- Department of ChemistryIndira Gandhi National Tribal University (Central University) Amarkantak Madhya Pradesh India
| | - Kishor Kumar Suryavanshi
- Department of ChemistryIndira Gandhi National Tribal University (Central University) Amarkantak Madhya Pradesh India
| | - Shyamaprosad Goswami
- Department of ChemistryIndian Institute of Engineering Science and Technology Shibpur, Howrah West Bengal India
| | - Rakesh Parida
- Department of ChemistryNational Institute of Technology Rourkela Odisha India
| | - Santanab Giri
- School of Applied Sciences and HumanitiesHaldia Institute of Technology Haldia West Bengal India
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Elwan HA, Zaky MT, Farag AS, Soliman FS, Hassan MED. Efficient pyridinium-based ionic liquid for deep oxidative desulfurization of model oil. J Mol Liq 2020. [DOI: 10.1016/j.molliq.2020.113146] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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5
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Insight into the Structure and Properties of Novel Imidazole-Based Salts of Salicylic Acid. Molecules 2019; 24:molecules24224144. [PMID: 31731746 PMCID: PMC6891694 DOI: 10.3390/molecules24224144] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2019] [Revised: 11/08/2019] [Accepted: 11/11/2019] [Indexed: 11/17/2022] Open
Abstract
The preparation of new active pharmaceutical ingredient (API) multicomponent crystal forms, especially co-crystals and salts, is being considered as a reliable strategy to improve API solubility and bioavailability. In this study, three novel imidazole-based salts of the poorly water-soluble salicylic acid (SA) are reported exhibiting a remarkable improvement in solubility and dissolution rate properties. All structures were solved by powder X-ray diffraction. Multiple complementary techniques were used to solve co-crystal/salt ambiguities: density functional theory calculations, Raman and 1H/13C solid-state NMR spectroscopies. In all molecular salts, the crystal packing interactions are based on a common charged assisted +N-H(SA)⋯O−(co-former) hydrogen bond interaction. The presence of an extra methyl group in different positions of the co-former, induced different supramolecular arrangements, yielding salts with different physicochemical properties. All salts present much higher solubility and dissolution rate than pure SA. The most promising results were obtained for the salts with imidazole and 1-methylimidazole co-formers.
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Thirumurugan R, Babu B, Anitha K, Chandrasekaran J. Experimental and Computational Perspectives on Bis(Creatininium) Succinate: An Efficient Organic Nonlinear Optical Material. Z PHYS CHEM 2017. [DOI: 10.1515/zpch-2016-0896] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract
In this work, combined experimental and computational investigations of a promising organic nonlinear optical (NLO) material, bis(creatininium) succinate (BCS), are reported. The optical quality single crystals of BCS were grown with the dimensions of 12×2×2 mm3. Single crystal X-ray diffraction analysis reveals that BCS crystallized in the orthorhombic system with non-centrosymmetric (NCS) space group F2dd. Vibrational modes of various BCS functional groups were confirmed by using FTIR and FT-Raman spectrum. UV-Vis-NIR spectrum shows that BCS crystal has low near-UV cut-off wavelength at 261 nm and optical transparency window in the visible and near-IR (261–1100 nm) region. Photoconductivity study has been carried out magnificently for grown crystals. The nonlinear optical property such as nonlinear refractive index (n2) and nonlinear absorption coefficient (β) have been investigated by z-scan technique. Density functional theory (DFT) studies were carried out to probe Mulliken charge analysis, frontier molecular orbitals (FMOs), molecular electrostatic potential (MEP) mapping and first order hyperpolarizability (β) for the optimized molecular structure. Experimental and computed vibrations were correlated well. All these characterization results endorse BCS as a suitable NLO candidate and are discussed in this work.
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Affiliation(s)
- Ramaiah Thirumurugan
- Department of Physics, School of Physics , Madurai Kamaraj University , Madurai 625021 , Tamilnadu, India
| | - Balraj Babu
- Department of Physics , Sri Ramakrishna Mission Vidyalaya College of Arts and Science , Coimbatore 641020 , Tamilnadu, India
| | - Kandasamy Anitha
- Department of Physics, School of Physics , Madurai Kamaraj University , Madurai 625021 , Tamilnadu, India , Phone: +91-9790080486
| | - Joseph Chandrasekaran
- Department of Physics , Sri Ramakrishna Mission Vidyalaya College of Arts and Science , Coimbatore 641020 , Tamilnadu, India
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A simple and rapid creatinine sensing via DLS selectivity, using calix[4]arene thiol functionalized gold nanoparticles. Talanta 2016; 147:590-7. [DOI: 10.1016/j.talanta.2015.10.029] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2015] [Revised: 10/11/2015] [Accepted: 10/12/2015] [Indexed: 11/17/2022]
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9
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Braun DE, Orlova M, Griesser U. Creatine: Polymorphs Predicted and Found. CRYSTAL GROWTH & DESIGN 2014; 14:4895-4900. [PMID: 26722225 PMCID: PMC4693963 DOI: 10.1021/cg501159c] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
Abstract
Hydrate and anhydrate crystal structure prediction (CSP) of creatine (CTN), a heavily used, badly water soluble, zwitterionic compound, has enabled the finding and characterization of its anhydrate polymorphs, including the thermodynamic room temperature form. Crystal structures of the novel forms were determined by combining laboratory powder X-ray diffraction data and ab initio generated structures. The computational method not only revealed all experimental forms but predicted the correct stability order, which was experimentally confirmed by measurements of the heat of hydration.
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Affiliation(s)
- Doris E. Braun
- Institute of Pharmacy and Institute of Mineralogy and Petrography, University of Innsbruck, Innrain 52, 6020 Innsbruck, Austria
- Tel: +43(0)512 507 58653; E-mail:
| | - Maria Orlova
- Institute of Pharmacy and Institute of Mineralogy and Petrography, University of Innsbruck, Innrain 52, 6020 Innsbruck, Austria
| | - Ulrich
J. Griesser
- Institute of Pharmacy and Institute of Mineralogy and Petrography, University of Innsbruck, Innrain 52, 6020 Innsbruck, Austria
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Goswami S, Chakrabarty R, Dey S, Fun HK. Steric inhibition of hydrogen bonding in molecular recognition of dicarboxylic acids: di-topic receptors containing a nitro group designed to behave like monotopic receptors. RSC Adv 2014. [DOI: 10.1039/c4ra06994c] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
The ditopic macrocyclic receptors having NO2 group show inhibition in hydrogen bonding molecular recognition towards the dicarboxylic acids to behave as monotopic receptors.
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Affiliation(s)
- Shyamaprosad Goswami
- Department of Chemistry
- Bengal Engineering and Science University
- Howrah, India
- X-ray Crystallography Unit
- School of Physics
| | - Rinku Chakrabarty
- Department of Chemistry
- Bengal Engineering and Science University
- Howrah, India
- X-ray Crystallography Unit
- School of Physics
| | - Swapan Dey
- Department of Applied Chemistry
- Indian Institute of Mines
- Dhanbad 826004, India
- X-ray Crystallography Unit
- School of Physics
| | - Hoong-Kun Fun
- Department of Pharmaceutical Chemistry
- College of Pharmacy
- King Saud University
- Riyadh 11451, Saudi Arabia
- X-ray Crystallography Unit
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11
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Wang L, Xue R, Li Y, Zhao Y, Liu F, Huang K. Hydrogen-bonding patterns in a series of multi-component molecular solids formed by 2,3,5,6-tetramethylpyrazine with selected carboxylic acids. CrystEngComm 2014. [DOI: 10.1039/c4ce00749b] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Hydrogen-bonding patterns in a series of cocrystals of 2,3,5,6-tetramethylpyrazine with selected carboxylic acids are discussed.
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Affiliation(s)
- Lei Wang
- College of Chemistry and Molecular Engineering
- Qingdao University of Science and Technology
- Qingdao 266042, PR China
| | - Ruiyu Xue
- College of Chemistry and Molecular Engineering
- Qingdao University of Science and Technology
- Qingdao 266042, PR China
| | - Yuanxin Li
- College of Chemistry and Molecular Engineering
- Qingdao University of Science and Technology
- Qingdao 266042, PR China
| | - Yiran Zhao
- College of Chemistry and Molecular Engineering
- Qingdao University of Science and Technology
- Qingdao 266042, PR China
| | - Faqian Liu
- College of Chemistry and Molecular Engineering
- Qingdao University of Science and Technology
- Qingdao 266042, PR China
| | - Keke Huang
- State Key Laboratory of Inorganic Synthesis and Preparative Chemistry
- Jilin University
- Changchun, PR China
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Rychkov D, Boldyreva EV, Tumanov NA. A new structure of a serotonin salt: comparison and conformational analysis of all known serotonin complexes. Acta Crystallogr C 2013; 69:1055-61. [PMID: 24005521 DOI: 10.1107/s0108270113019823] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2013] [Accepted: 07/17/2013] [Indexed: 11/10/2022] Open
Abstract
Four serotonin salt structures (serotonin adipate, C10H13N2O(+)·C6H9O4(-), is a previously unknown structure) were analysed to understand the influence of the anion on serotonin conformation. Hydrogen bonding alone favours a flat conformation, whereas additional stacking interactions between ions may possibly account for the nonplanar conformation. Since molecular conformation, stability and biological activity are interrelated, one can consider influencing the chemical and biological properties of serotonin by selecting an appropriate counter-ion for salt formation.
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Affiliation(s)
- Denis Rychkov
- REC-008, Novosibirsk State University, Pirogova 2, Novosibirsk 630090, Russian Federation.
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André V, Martins I, Quaresma S, Martins M, Duarte MT. Transforming aspirin into novel molecular salts of salicylic acid. Struct Chem 2013. [DOI: 10.1007/s11224-013-0326-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Goswami S, Das NK, Sen D, Fun HK. A case study of solid state inhibition lock opening of pyridine N-oxide in dicarboxylic acid recognition. Supramol Chem 2012. [DOI: 10.1080/10610278.2012.656123] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Affiliation(s)
- Shyamaprosad Goswami
- a Department of Chemistry , Bengal Engineering and Science University , Shibpur, Howrah , 711103 , West Bengal , India
| | - Nirmal Kumar Das
- a Department of Chemistry , Bengal Engineering and Science University , Shibpur, Howrah , 711103 , West Bengal , India
| | - Debabrata Sen
- a Department of Chemistry , Bengal Engineering and Science University , Shibpur, Howrah , 711103 , West Bengal , India
| | - Hoong-Kun Fun
- b X-Ray Crystallography Unit , School of Physics, Universiti Sains Malaysia , 11800 USM, Penang , Malaysia
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Goswami S, Das NK, Sen D, Hazra G, Goh JH, Sing YC, Fun HK. Recognition of acids involved in Krebs cycle by 9-anthrylmethyl-di(6-acetylamino-2-picolyl)amine: a case of selective fluorescence enhancement for maleic acid. NEW J CHEM 2011. [DOI: 10.1039/c1nj20339h] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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16
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Moreno D, Cuevas JV, García-Herbosa G, Torroba T. A fluorescent molecular ruler as a selective probe for ω-aminoacids. Chem Commun (Camb) 2011; 47:3183-5. [DOI: 10.1039/c0cc05454b] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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17
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Goswami S, Hazra A, Jana S, Fun HK. Recognition study of substituted benzoic acids by 7-substituted pterin receptors in solution and solid phases. CrystEngComm 2010. [DOI: 10.1039/b917092h] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Goswami S, Jana S, Hazra A, Fun HK, Chantrapromma S. Non-covalent synthesis of ionic and molecular complexes of benzoic acid and substituted 2-aminopyrimidines by varying aryl/alkyl substituents and their supramolecular chemistry. Supramol Chem 2008. [DOI: 10.1080/10610270701426686] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Affiliation(s)
- Shyamaprosad Goswami
- a Department of Chemistry , Bengal Engineering and Science University , Shibpur, Howrah, India
| | - Subrata Jana
- a Department of Chemistry , Bengal Engineering and Science University , Shibpur, Howrah, India
| | - Anita Hazra
- a Department of Chemistry , Bengal Engineering and Science University , Shibpur, Howrah, India
| | - Hoong-Kun Fun
- b X-ray Crystallography Unit , School of Physics, Universiti Sains Malaysia, Penang, Malaysia
| | - Suchada Chantrapromma
- c Department of Chemistry, Faculty of Science , Prince of Songkla University , Hat-Yai, Songkhla, Thailand
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Goswami S, Jana S, Dey S, Sen D, Fun HK, Chantrapromma S. Recognition of a dicarboxylic acid with dipicolyl urea in solution and in solid phases: intramolecular hydrogen bond inhibiting both pyridine nitrogens from binding carboxyl groups. Tetrahedron 2008. [DOI: 10.1016/j.tet.2008.04.066] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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21
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Goswami S, Jana S, Das NK, Fun HK, Chantrapromma S. Solid state structural study on recognition of aromatic dicarboxylic acids by substituted amino-pyrimidines and its supramolecular network. J Mol Struct 2008. [DOI: 10.1016/j.molstruc.2007.07.005] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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22
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Goswami S, Jana S, Fun HK. Recognition of dicarboxylic acids by 3,3′-bipyridine amide based receptors and its supramolecular behavior in solid state. CrystEngComm 2008. [DOI: 10.1039/b715136e] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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23
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Marandi F, Mirtamizdoust B, Chantrapromma S, Fun H. Synthesis and Crystal Structure of a Novel Polymeric Lead(II) Compound: [Pb
2
(phen)
2
(N
3
)
3
(ClO
4
)]
n. Z Anorg Allg Chem 2007. [DOI: 10.1002/zaac.200700076] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Farzin Marandi
- Department of Science, Payam Noor University of Zanjan, Zanjan / Iran
| | | | - Suchada Chantrapromma
- Songkhla/Thailand, Department of Chemistry, Faculty of Science, Prince of Songkla University, Hat‐Yai
| | - Hoong‐Kun Fun
- Penang/Malaysia, X‐ray Crystallography Unit, School of Physics, Universiti Sains Malaysia
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