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Lennon G, Dingwall P. Enabling High Throughput Kinetic Experimentation by Using Flow as a Differential Kinetic Technique. Angew Chem Int Ed Engl 2024; 63:e202318146. [PMID: 38078481 PMCID: PMC10952970 DOI: 10.1002/anie.202318146] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2023] [Indexed: 12/23/2023]
Abstract
Kinetic data is most commonly collected through the generation of time-series data under either batch or flow conditions. Existing methods to generate kinetic data in flow collect integral data (concentration over time) only. Here, we report a method for the rapid and direct collection of differential kinetic data (direct measurement of rate) in flow by performing a series of instantaneous rate measurements on sequential small-scale reactions. This technique decouples the time required to generate a full kinetic profile from the time required for a reaction to reach completion, enabling high throughput kinetic experimentation. In addition, comparison of kinetic profiles constructed at different residence times allows the robustness, or stability, of homogeneously catalysed reactions to be interrogated. This approach makes use of a segmented flow platform which was shown to quantitatively reproduce batch kinetic data. The proline mediated aldol reaction was chosen as a model reaction to perform a high throughput kinetic screen of 216 kinetic profiles in 90 hours, one every 25 minutes, which would have taken an estimated continuous 3500 hours in batch, an almost 40-fold increase in experimental throughput matched by a corresponding reduction in material consumption.
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Affiliation(s)
- Gavin Lennon
- School of Chemistry and Chemical EngineeringQueen's University BelfastDavid Keir Building, Stranmillis RoadBelfastBT9 5AGUK
| | - Paul Dingwall
- School of Chemistry and Chemical EngineeringQueen's University BelfastDavid Keir Building, Stranmillis RoadBelfastBT9 5AGUK
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2
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Re-Examination of Proline-Catalyzed Intermolecular Aldol Reactions: An Ab Initio Kinetic Modelling Study. Top Catal 2021. [DOI: 10.1007/s11244-021-01501-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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3
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Chevis PJ, Pyne SG. Synthesis of enantioenriched α-heteroatom functionalised aldehydes by chiral organocatalysis and their synthetic applications. Org Chem Front 2021. [DOI: 10.1039/d1qo00101a] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
Asymmetric organocatalysis is a versatile method for the enantioselective α-functionalisation of aldehydes. The synthetic scope for chiral α-heteroatom substituted aldehydes is examined including their applications in synthesis.
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Affiliation(s)
- Philip J. Chevis
- School of Chemistry and Molecular Bioscience
- University of Wollongong
- Wollongong
- Australia
| | - Stephen G. Pyne
- School of Chemistry and Molecular Bioscience
- University of Wollongong
- Wollongong
- Australia
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4
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Martell JD, Milner PJ, Siegelman RL, Long JR. Kinetics of cooperative CO 2 adsorption in diamine-appended variants of the metal-organic framework Mg 2(dobpdc). Chem Sci 2020; 11:6457-6471. [PMID: 34094111 PMCID: PMC8152673 DOI: 10.1039/d0sc01087a] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Carbon capture and sequestration is a key element of global initiatives to minimize anthropogenic greenhouse gas emissions. Although many investigations of new candidate CO2 capture materials focus on equilibrium adsorption properties, it is also critical to consider adsorption/desorption kinetics when evaluating adsorbent performance. Diamine-appended variants of the metal–organic framework Mg2(dobpdc) (dobpdc4− = 4,4′-dioxidobiphenyl-3,3′-dicarboxylate) are promising materials for CO2 capture because of their cooperative chemisorption mechanism and associated step-shaped equilibrium isotherms, which enable large working capacities to be accessed with small temperature swings. However, the adsorption/desorption kinetics of these unique materials remain understudied. More generally, despite the necessity of kinetics characterization to advance adsorbents toward commercial separations, detailed kinetic studies of metal–organic framework-based gas separations remain rare. Here, we systematically investigate the CO2 adsorption kinetics of diamine-appended Mg2(dobpdc) variants using a thermogravimetric analysis (TGA) assay. In particular, we examine the effects of diamine structure, temperature, and partial pressure on CO2 adsorption and desorption kinetics. Importantly, most diamine-appended Mg2(dobpdc) variants exhibit an induction period prior to reaching the maximum rate of CO2 adsorption, which we attribute to their unique cooperative chemisorption mechanism. In addition, these materials exhibit inverse Arrhenius behavior, displaying faster adsorption kinetics and shorter induction periods at lower temperatures. Using the Avrami model for nucleation and growth kinetics, we determine rate constants for CO2 adsorption and quantitatively compare rate constants among different diamine-appended variants. Overall, these results provide guidelines for optimizing adsorbent design to facilitate CO2 capture from diverse target streams and highlight kinetic phenomena relevant for other materials in which cooperative chemisorption mechanisms are operative. An in-depth investigation of the CO2 adsorption kinetics of a promising class of cooperative carbon capture materials offers new insight into their structure-performance properties.![]()
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Affiliation(s)
- Jeffrey D Martell
- Department of Chemistry, University of California Berkeley CA 94720 USA
| | - Phillip J Milner
- Department of Chemistry, University of California Berkeley CA 94720 USA
| | | | - Jeffrey R Long
- Department of Chemistry, University of California Berkeley CA 94720 USA .,Department of Chemical and Biomolecular Engineering, University of California Berkeley CA 94720 USA.,Materials Sciences Division, Lawrence Berkeley National Laboratory Berkeley CA 94720 USA
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5
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Affiliation(s)
- Donna G. Blackmond
- Department of Chemistry, Scripps Research, La Jolla, California 92037, United States
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Affiliation(s)
- Konstantin P. Bryliakov
- Boreskov Institute of Catalysis, Pr. Lavrentieva 5, Novosibirsk 630090, Russian Federation
- Novosibirsk State University, Pirogova 2, Novosibirsk 630090, Russian Federation
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7
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Ashley MA, Hirschi JS, Izzo JA, Vetticatt MJ. Isotope Effects Reveal the Mechanism of Enamine Formation in l-Proline-Catalyzed α-Amination of Aldehydes. J Am Chem Soc 2016; 138:1756-9. [DOI: 10.1021/jacs.5b10876] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Melissa A. Ashley
- Department of Chemistry, Binghamton University, Binghamton, New York 13902, United States
| | - Jennifer S. Hirschi
- Department of Chemistry, Binghamton University, Binghamton, New York 13902, United States
| | - Joseph A. Izzo
- Department of Chemistry, Binghamton University, Binghamton, New York 13902, United States
| | - Mathew J. Vetticatt
- Department of Chemistry, Binghamton University, Binghamton, New York 13902, United States
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8
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Cyclopropanation reactions catalysed by dendrimers possessing one metalloporphyrin active site at the core: linear and sigmoidal kinetic behaviour for different dendrimer generations. Tetrahedron 2016. [DOI: 10.1016/j.tet.2016.01.013] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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9
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Blackmond DG. Kinetic Profiling of Catalytic Organic Reactions as a Mechanistic Tool. J Am Chem Soc 2015; 137:10852-66. [DOI: 10.1021/jacs.5b05841] [Citation(s) in RCA: 204] [Impact Index Per Article: 22.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Donna G. Blackmond
- Department of Chemistry, The Scripps Research Institute, La Jolla, California 92037 United States
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Mower MP, Blackmond DG. Mechanistic Rationalization of Unusual Sigmoidal Kinetic Profiles in the Machetti–De Sarlo Cycloaddition Reaction. J Am Chem Soc 2015; 137:2386-91. [DOI: 10.1021/ja512753v] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Affiliation(s)
- Matthew P. Mower
- Department of Chemistry, The Scripps Research Institute, La Jolla, California 92037, United States
| | - Donna G. Blackmond
- Department of Chemistry, The Scripps Research Institute, La Jolla, California 92037, United States
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11
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Willms JA, Beel R, Schmidt ML, Mundt C, Engeser M. A new charge-tagged proline-based organocatalyst for mechanistic studies using electrospray mass spectrometry. Beilstein J Org Chem 2014; 10:2027-37. [PMID: 25246962 PMCID: PMC4168921 DOI: 10.3762/bjoc.10.211] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2014] [Accepted: 08/13/2014] [Indexed: 11/23/2022] Open
Abstract
A new 4-hydroxy-L-proline derivative with a charged 1-ethylpyridinium-4-phenoxy substituent has been synthesized with the aim of facilitating mechanistic studies of proline-catalyzed reactions by ESI mass spectrometry. The charged residue ensures a strongly enhanced ESI response compared to neutral unmodified proline. The connection by a rigid linker fixes the position of the charge tag far away from the catalytic center in order to avoid unwanted interactions. The use of a charged catalyst leads to significantly enhanced ESI signal abundances for every catalyst-derived species which are the ones of highest interest present in a reacting solution. The new charged proline catalyst has been tested in the direct asymmetric inverse aldol reaction between aldehydes and diethyl ketomalonate. Two intermediates in accordance with the List-Houk mechanism for enamine catalysis have been detected and characterized by gas-phase fragmentation. In addition, their temporal evolution has been followed using a microreactor continuous-flow technique.
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Affiliation(s)
- J Alexander Willms
- University of Bonn, Kekulé-Institute of Organic Chemistry and Biochemistry, Gerhard-Domagk-Str. 1, D-53121 Bonn, Germany
| | - Rita Beel
- University of Bonn, Kekulé-Institute of Organic Chemistry and Biochemistry, Gerhard-Domagk-Str. 1, D-53121 Bonn, Germany
| | - Martin L Schmidt
- University of Bonn, Kekulé-Institute of Organic Chemistry and Biochemistry, Gerhard-Domagk-Str. 1, D-53121 Bonn, Germany
| | - Christian Mundt
- University of Bonn, Kekulé-Institute of Organic Chemistry and Biochemistry, Gerhard-Domagk-Str. 1, D-53121 Bonn, Germany
| | - Marianne Engeser
- University of Bonn, Kekulé-Institute of Organic Chemistry and Biochemistry, Gerhard-Domagk-Str. 1, D-53121 Bonn, Germany
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12
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Porcar R, Ríos-Lombardía N, Busto E, Gotor-Fernández V, Gotor V, Garcia-Verdugo E, Isabel Burguete M, Luis SV. Chemoenzymatic synthesis of optically active 2-(2′- or 4′-substituted-1H-imidazol-1-yl)cycloalkanols: chiral additives for (l)-proline. Catal Sci Technol 2013. [DOI: 10.1039/c3cy00107e] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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13
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Huerta E, Stals PJM, Meijer EW, Palmans ARA. Consequences of Folding a Water-Soluble Polymer Around an Organocatalyst. Angew Chem Int Ed Engl 2012. [DOI: 10.1002/ange.201207123] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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14
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Huerta E, Stals PJM, Meijer EW, Palmans ARA. Consequences of Folding a Water-Soluble Polymer Around an Organocatalyst. Angew Chem Int Ed Engl 2012; 52:2906-10. [DOI: 10.1002/anie.201207123] [Citation(s) in RCA: 166] [Impact Index Per Article: 13.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2012] [Revised: 10/10/2012] [Indexed: 11/06/2022]
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15
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Cheong PHY, Legault CY, Um JM, Çelebi-Ölçüm N, Houk KN. Quantum mechanical investigations of organocatalysis: mechanisms, reactivities, and selectivities. Chem Rev 2011; 111:5042-137. [PMID: 21707120 PMCID: PMC3154597 DOI: 10.1021/cr100212h] [Citation(s) in RCA: 429] [Impact Index Per Article: 33.0] [Reference Citation Analysis] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Paul Ha-Yeon Cheong
- Oregon State University, Department of Chemistry, 153 Gilbert Hall, Corvallis, OR 97331-4003 USA
| | - Claude Y. Legault
- University of Sherbrooke, Department of Chemistry, 2500 boul. de l’Université, local D1-3029, Sherbrooke (Québec) J1K 2R1 CANADA
| | - Joann M. Um
- University of California Los Angeles, Department of Chemistry and Biochemistry, 607 Charles E. Young Drive East, Los Angeles, CA 90095-1569 USA
| | - Nihan Çelebi-Ölçüm
- University of California Los Angeles, Department of Chemistry and Biochemistry, 607 Charles E. Young Drive East, Los Angeles, CA 90095-1569 USA
| | - K. N. Houk
- University of California Los Angeles, Department of Chemistry and Biochemistry, 607 Charles E. Young Drive East, Los Angeles, CA 90095-1569 USA
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Hein JE, Armstrong A, Blackmond DG. Kinetic Profiling of Prolinate-Catalyzed α-Amination of Aldehydes. Org Lett 2011; 13:4300-3. [DOI: 10.1021/ol201639z] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Jason E. Hein
- Department of Chemistry, The Scripps Research Institute, La Jolla, California 92037, United States, and Department of Chemistry, Imperial College London, SW7 2AZ, U.K
| | - Alan Armstrong
- Department of Chemistry, The Scripps Research Institute, La Jolla, California 92037, United States, and Department of Chemistry, Imperial College London, SW7 2AZ, U.K
| | - Donna G. Blackmond
- Department of Chemistry, The Scripps Research Institute, La Jolla, California 92037, United States, and Department of Chemistry, Imperial College London, SW7 2AZ, U.K
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17
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Mechanistic rationalization of organocatalyzed conjugate addition of linear aldehydes to nitro-olefins. J Am Chem Soc 2011; 133:8822-5. [PMID: 21568340 DOI: 10.1021/ja203660r] [Citation(s) in RCA: 140] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Kinetic studies of the conjugate addition of propanal to nitrostyrene catalyzed by diarylprolinol ethers reveal that formation of the product iminium species is rate-determining and is promoted by both the reaction product and acid additives. The beneficial role of a dominant cyclobutane intermediate in maintaining high stereoselectivity is highlighted. This mechanistic understanding led to the design of highly productive reaction protocols.
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18
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Khan SS, Shah J, Liebscher J. Ionic-liquid tagged prolines as recyclable organocatalysts for enantioselective α-aminoxylations of carbonyl compounds. Tetrahedron 2011. [DOI: 10.1016/j.tet.2011.01.031] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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19
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Nielsen M, Worgull D, Zweifel T, Gschwend B, Bertelsen S, Jørgensen KA. Mechanisms in aminocatalysis. Chem Commun (Camb) 2010; 47:632-49. [PMID: 20953517 DOI: 10.1039/c0cc02417a] [Citation(s) in RCA: 257] [Impact Index Per Article: 18.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The mechanisms of the α-, β- and γ-functionalisations of aldehydes and α,β-unsaturated aldehydes by secondary amines are presented and discussed.
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Affiliation(s)
- Martin Nielsen
- Center for Catalysis, Department of Chemistry, Aarhus University, DK-8000 Aarhus C, Denmark
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20
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Pohjakallio A, Pihko PM, Laitinen UM. Synthesis of 2-Isoxazolines: Enantioselective and Racemic Methods Based on Conjugate Additions of Oximes. Chemistry 2010; 16:11325-39. [DOI: 10.1002/chem.201000861] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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21
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Konstantinov IA, Broadbelt LJ. The Role of Oxazolidinones in l-Proline-Assisted Aldol-Type Reactions. Top Catal 2010. [DOI: 10.1007/s11244-010-9527-3] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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22
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Organocatalyzed asymmetric alpha-oxidation, alpha-aminoxylation and alpha-amination of carbonyl compounds. Molecules 2010; 15:917-58. [PMID: 20335955 PMCID: PMC6263195 DOI: 10.3390/molecules15020917] [Citation(s) in RCA: 132] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2009] [Revised: 01/27/2010] [Accepted: 02/05/2010] [Indexed: 11/17/2022] Open
Abstract
Organocatalytic asymmetric α-oxidation and amination reactions of carbonyl compounds are highly useful synthetic methodologies, especially in generating chiral building blocks that previously have not been easily accessible by traditional methods. The concept is relatively new and therefore the list of new catalysts, oxidizing and aminating reagents, as well as new substrates, are expanding at an amazing rate. The scope of this review includes new reactions and catalysts, mechanistic aspects and synthetic applications of α-oxidation, hydroxylation, aminoxylation, amination, hydrazination, hydroxyamination and related α-heteroatom functionalization of aldehydes, ketones and related active methylene compounds published during 2005–2009.
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23
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Ding X, Tang W, Zhu C, Cheng Y. Imidazolium Ion-Tagged Proline Organocatalyst for α-Aminoxylation of Aldehydes and Ketones in Ionic Liquids. Adv Synth Catal 2010. [DOI: 10.1002/adsc.200900652] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Zotova N, Moran A, Armstrong A, Blackmond D. A Coherent Mechanistic Rationale for Additive Effects and Autoinductive Behaviour in Proline-Mediated Reactions. Adv Synth Catal 2009. [DOI: 10.1002/adsc.200900665] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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25
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Poe SL, Bogdan AR, Mason BP, Steinbacher JL, Opalka SM, McQuade DT. Use of Bifunctional Ureas to Increase the Rate of Proline-Catalyzed α-Aminoxylations. J Org Chem 2009; 74:1574-80. [DOI: 10.1021/jo802461w] [Citation(s) in RCA: 50] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Sarah L. Poe
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, and Department of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306
| | - Andrew R. Bogdan
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, and Department of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306
| | - Brian P. Mason
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, and Department of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306
| | - Jeremy L. Steinbacher
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, and Department of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306
| | - Suzanne M. Opalka
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, and Department of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306
| | - D. Tyler McQuade
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, and Department of Chemistry and Biochemistry, Florida State University, Tallahassee, Florida 32306
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Hayashi Y, Aratake S, Imai Y, Hibino K, Chen QY, Yamaguchi J, Uchimaru T. Direct Asymmetric α-Amination of Cyclic Ketones Catalyzed by Siloxyproline. Chem Asian J 2008; 3:225-32. [DOI: 10.1002/asia.200700307] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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27
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Kotsuki H, Ikishima H, Okuyama A. Organocatalytic Asymmetric Synthesis Using Proline and Related Molecules. Part 2. HETEROCYCLES 2008. [DOI: 10.3987/rev-07-621] [Citation(s) in RCA: 87] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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28
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Affiliation(s)
- Abigail G. Doyle
- Department of Chemistry & Chemical Biology, Harvard University, Cambridge, Massachusetts 02138
| | - Eric N. Jacobsen
- Department of Chemistry & Chemical Biology, Harvard University, Cambridge, Massachusetts 02138
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29
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Zotova N, Franzke A, Armstrong A, Blackmond DG. Clarification of the role of water in proline-mediated aldol reactions. J Am Chem Soc 2007; 129:15100-1. [PMID: 18001021 DOI: 10.1021/ja0738881] [Citation(s) in RCA: 206] [Impact Index Per Article: 12.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Natalia Zotova
- Department of Chemical Engineering and Chemical Technology, Imperial College London, London SW7 2AZ, United Kingdom
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30
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