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Khatymov RV, Muftakhov MV, Tuktarov RF, Shchukin PV, Khatymova LZ, Pancras E, Terentyev AG, Petrov NI. Resonant electron capture by polycyclic aromatic hydrocarbon molecules: Effects of aza-substitution. J Chem Phys 2024; 160:124310. [PMID: 38533882 DOI: 10.1063/5.0195316] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/01/2024] [Accepted: 03/07/2024] [Indexed: 03/28/2024] Open
Abstract
Resonant electron capture by aza and diaza derivatives of phenanthrene (7,8-benzoquinoline and 1,10-phenanthroline) and anthracene (acridine and phenazine) at incident free electron energies (Ee) in the range of 0-15 eV was studied. All compounds except 7,8-benzoquinoline form long-lived molecular ions (M-) at thermal electron energies (Ee ∼ 0 eV). Acridine and phenazine also form such ions at epithermal electron energies up to Ee = 1.5-2.5 eV. The lifetimes (τa) of M- with respect to electron autodetachment are proportional to the extent of aza-substitution and increase on going from molecules with bent geometry of the fused rings (azaphenanthrenes) to linear isomers (azaanthracenes). These regularities are due to an increase in the adiabatic electron affinities (EAa) of the molecules. The EAa values of the molecules under study were comprehensively assessed based on a comparative analysis of the measured τa values using the Rice-Ramsperger-Kassel-Marcus theory, the electronic structure analysis using the molecular orbital approach, as well as the density functional calculations of the total energy differences between the molecules and anions. The only fragmentation channel of M- ions from the compounds studied is abstraction of hydrogen atoms. When studying [M-H]- ions, electron autodetachment processes were observed, the τa values were measured, and the appearance energies were determined. A comparative analysis of the gas-phase acidity of the molecules and the EAa values of the [M-H]· radicals revealed their proportionality to the EAa values of the parent molecules.
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Affiliation(s)
- Rustem V Khatymov
- Mendeleev University of Chemical Technology of Russia, Miusskaya Square, 9, 125047 Moscow, Russia
| | - Mars V Muftakhov
- Institute of Molecule and Crystal Physics, Ufa Federal Research Center, Russian Academy of Sciences, Prospekt Oktyabrya, 151, 450075 Ufa, Russia
| | - Renat F Tuktarov
- Institute of Molecule and Crystal Physics, Ufa Federal Research Center, Russian Academy of Sciences, Prospekt Oktyabrya, 151, 450075 Ufa, Russia
| | - Pavel V Shchukin
- Institute of Molecule and Crystal Physics, Ufa Federal Research Center, Russian Academy of Sciences, Prospekt Oktyabrya, 151, 450075 Ufa, Russia
| | - Lyaysan Z Khatymova
- Institute of Molecule and Crystal Physics, Ufa Federal Research Center, Russian Academy of Sciences, Prospekt Oktyabrya, 151, 450075 Ufa, Russia
| | - Eugene Pancras
- Ufa State Petroleum Technological University, ul. Kosmonavtov, 1, 450064 Ufa, Russia
| | - Andrey G Terentyev
- Mendeleev University of Chemical Technology of Russia, Miusskaya Square, 9, 125047 Moscow, Russia
| | - Nikolay I Petrov
- Mendeleev University of Chemical Technology of Russia, Miusskaya Square, 9, 125047 Moscow, Russia
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Gangwar P, Negi SS, Ramanathan V, Ramachandran CN. Effect of confinement on the electronic and optical properties of azobenzene: cucurbituril as a means of confinement. Mol Phys 2022. [DOI: 10.1080/00268976.2022.2109523] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/15/2022]
Affiliation(s)
- Peaush Gangwar
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee, India
| | - Saurabh Singh Negi
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee, India
| | | | - C. N. Ramachandran
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee, India
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3
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Dhiman A, Ramachandran CN. Cis–trans isomerisation and absorption properties of the ring-extended azobenzene. Mol Phys 2021. [DOI: 10.1080/00268976.2021.1966113] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Angat Dhiman
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee, India
| | - C. N. Ramachandran
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee, India
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Khatymov RV, Terentyev AG. Resonant electron capture negative ion mass spectrometry: the state of the art and the potential for solving analytical problems. Russ Chem Bull 2021. [DOI: 10.1007/s11172-021-3132-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Martins GF, de P. Cardoso B, Galamba N, Cabral BJC. Exploring a near-Hartree–Fock–Kohn–Sham approach to study electronic properties of azobenzene in interaction with gold: From clusters to the Au(111) surface. J Chem Phys 2020; 153:214701. [DOI: 10.1063/5.0030315] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Affiliation(s)
- Gabriel F. Martins
- BioISI-Biosystems and Integrative Sciences Institute, Faculty of Sciences, University of Lisboa, 1749-016 Lisboa, Portugal
| | - Bernardo de P. Cardoso
- BioISI-Biosystems and Integrative Sciences Institute, Faculty of Sciences, University of Lisboa, 1749-016 Lisboa, Portugal
| | - Nuno Galamba
- BioISI-Biosystems and Integrative Sciences Institute, Faculty of Sciences, University of Lisboa, 1749-016 Lisboa, Portugal
| | - Benedito J. C. Cabral
- BioISI-Biosystems and Integrative Sciences Institute, Faculty of Sciences, University of Lisboa, 1749-016 Lisboa, Portugal
- Departamento de Química e Bioquímica, Faculdade de Ciências, Universidade de Lisboa, 1749-016 Lisboa, Portugal
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Pshenichnyuk SA, Asfandiarov NL. Structural rearrangements as relaxation pathway for molecular negative ions formed via vibrational Feshbach resonance. Phys Chem Chem Phys 2020; 22:16150-16156. [PMID: 32638766 DOI: 10.1039/d0cp02647f] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
The low-energy (0-15 eV) resonance electron interaction with two organic acids, oxaloacetic and α-ketoglutaric, is studied under gas-phase conditions using dissociative electron attachment spectroscopy. The most unexpected observation is the long-lived (microseconds) molecular negative ions formed by thermal electron attachment via the vibrational Feshbach resonance mechanism in both compounds. Unlike oxaloacetic acid, for which only one slow (microseconds) dissociative decay is detected, as many as five metastable negative ions are observed for α-ketoglutaric acid. These results are analyzed using density functional theory calculations and estimations of electron affinity using the experimental electron detachment times. The results are of considerable interest for understanding the fundamental mechanisms responsible for the dynamics of highly excited negative ions and the transformation pathways of biologically relevant molecules stimulated by excess electron attachment.
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Affiliation(s)
- Stanislav A Pshenichnyuk
- Institute of Molecule and Crystal Physics, Ufa Federal Research Centre, Russian Academy of Sciences, Prospekt Oktyabrya 151, 450075 Ufa, Russia.
| | - Nail L Asfandiarov
- Institute of Molecule and Crystal Physics, Ufa Federal Research Centre, Russian Academy of Sciences, Prospekt Oktyabrya 151, 450075 Ufa, Russia.
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7
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Martins GF, Cabral BJC. Electron Propagator Theory Approach to the Electron Binding Energies of a Prototypical Photo-Switch Molecular System: Azobenzene. J Phys Chem A 2019; 123:2091-2099. [PMID: 30779578 DOI: 10.1021/acs.jpca.9b00532] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The electron binding energies for the trans and cis conformers of azobenzene (AB), a prototypical photoswitch, were investigated by electron propagator theory (EPT). The EPT results are compared with data from photoelectron and electron transmission spectroscopies and complemented by the calculation of the differences between vertical and adiabatic ionization energies and electron affinities of the AB conformers. These differences are discussed in terms of the geometry changes associated with the processes of ionization and electron attachment. The results pointed out a major difference between these processes when we compare trans-AB and cis-AB. For trans-AB, electron attachment leads to a small geometry change, whereas for cis-AB, it is the ionized structure that keeps some similarity with the neutral species. We emphasize the interest of the present results for a better understanding of recent experiments on the dark cis-trans isomerization in different environments, specifically for azobenzenes in interaction with gold nanoparticles, where the proposed cis-trans isomerization mechanism relies on electron transfer induced isomerization.
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Affiliation(s)
- Gabriel F Martins
- Biosystems and Integrative Sciences Institute (BioISI) , Faculdade de Ciências, Universidade de Lisboa , 1749-016 Lisboa , Portugal
| | - Benedito J C Cabral
- Biosystems and Integrative Sciences Institute (BioISI) , Faculdade de Ciências, Universidade de Lisboa , 1749-016 Lisboa , Portugal.,Departamento de Quı́mica e Bioquı́mica , Faculdade de Ciências, Universidade de Lisboa , 1749-016 Lisboa , Portugal
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Khatymov RV, Ivanova MV, Terentyev AG, Rybal’chenko IV. Discrimination of stereoisomers of 2-chlorovinyldichloroarsine and bis(2-chlorovinyl)chloroarsine from the data of negative ion mass spectrometry and quantum-chemical simulation. RUSS J GEN CHEM+ 2015. [DOI: 10.1134/s1070363215110158] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Tian Z, Wen J, Ma J. Dynamic simulations of stimuli-responsive switching of azobenzene derivatives in self-assembled monolayers: reactive rotation potential and switching functions. MOLECULAR SIMULATION 2014. [DOI: 10.1080/08927022.2014.918974] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Cheng HY, Huang YS. Temporary anion states of p-benzoquinone: shape and core-excited resonances. Phys Chem Chem Phys 2014; 16:26306-13. [DOI: 10.1039/c4cp03353a] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Abstract
The energies and lifetimes of shape and core-excited resonances of p-benzoquinone have been studied in this paper. The obtained resonance parameters are of fundamental importance in understanding the bonding and electronic processes of quinones.
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Affiliation(s)
- Hsiu-Yao Cheng
- Department of Chemistry
- Tunghai University
- Taiwan Boulevard Sec. 4, Taiwan, Republic of China
| | - Yu-Shiuan Huang
- Department of Chemistry
- Tunghai University
- Taiwan Boulevard Sec. 4, Taiwan, Republic of China
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11
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Ómarsson B, Ingólfsson O. Stabilization, fragmentation and rearrangement reactions in low-energy electron interaction with tetrafluoro-para-benzoquinone: a combined theoretical and experimental study. Phys Chem Chem Phys 2013; 15:16758-67. [DOI: 10.1039/c3cp52397g] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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12
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Khvostenko OG, Lukin VG, Tseplin EE. Anomalously long-lived molecular negative ions of duroquinone. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2012; 26:2535-2547. [PMID: 23008071 DOI: 10.1002/rcm.6372] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
The problem under investigation here is establishment of mechanisms of the resonant electron capture by molecules, using the example of duroquinone (2,3,5,6-tetramethyl-1,4-benzoquinone). A solution is important because it will provide new insights into the fundamental physical laws and widespread applications in various fields like molecular nanoelectronics, touched upon herein too. Resonant electron capture (REC) in duroquinone was studied with negative ion mass spectrometry of the REC as the main method, and UV absorption and the photoelectron spectroscopy as the auxiliary ones. The latter were used to study the electronic structures of the various neutral molecular states that are the parent ones for the negative molecular ions formed by electron attachment to the molecules. B3LYP/6-311 + G(d,p) calculations were widely used throughout the study. As a result, an intensive peak of the negative molecular ions with anomalously high lifetime (200 microseconds) was registered at the attached electron energy of 1.8 eV. The ions were determined to be quartets delaying the electron autodetachment because of spin prohibition and appearing via inter-system crossing from the negative molecular ion doublets produced in the core-excited Feshbach resonances. Finally, the pattern of the REC in duroquinone was obtained for the energy region of 1-4 eV which is presented by shape resonances, core-excited Feshbach resonances and by mechanisms little-known for molecules of inter-shell resonances and the formation of ion quartets. The latter were proposed to be related to the negative differential resistance in molecular nanoelectronics.
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Affiliation(s)
- O G Khvostenko
- Institute of Molecule and Crystal Physics, Ufa Research Center of Russian Academy of Sciences, Ufa, Russia.
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Lin TY, Chaudhari A, Lee SL. Correlation between substituent constants and hyperpolarizabilities for di-substituted trans-azobenzenes. J Mol Model 2012; 19:529-38. [DOI: 10.1007/s00894-012-1577-y] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2012] [Accepted: 08/20/2012] [Indexed: 11/28/2022]
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Pshenichnyuk SA, Vorob'ev AS, Modelli A. Resonance electron attachment and long-lived negative ions of phthalimide and pyromellitic diimide. J Chem Phys 2012; 135:184301. [PMID: 22088059 DOI: 10.1063/1.3658372] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023] Open
Abstract
Resonance attachment of low energy (0-15 eV) electrons to imide-containing molecules, phthalimide (PTI) and pyromellitic diimide (PMDI), was investigated in the gas-phase by means of Electron Transmission Spectroscopy (ETS) and Dissociative Electron Attachment Spectroscopy (DEAS). Among a variety of low intensity negatively charged fragments formed by DEA, in both compounds the dominant species was found to be a long-lived (μs) parent molecular anion formed at zero energy. In addition, in PMDI long-lived molecular anions were also observed at 0.85 and 2.0 eV. The experimentally evaluated detachment times from the molecular anions as a function of incident electron energy are modeled with a simple computational approach based on the RRKM theory. The occurrence of radiationless transitions to the ground anion state, followed by internal vibrational relaxation, is believed to be a plausible mechanism to explain the exceptionally long lifetime of the PMDI molecular anions formed above zero energy.
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Affiliation(s)
- Stanislav A Pshenichnyuk
- Institute of Physics of Molecules and Crystals, Ufa Research Center, Russian Academy of Sciences, October Avenue, 151, 450075 Ufa, Russia.
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Pshenichnyuk SA, Vorob'ev AS, Asfandiarov NL, Modelli A. Molecular anion formation in 9,10-anthraquinone: Dependence of the electron detachment rate on temperature and incident electron energy. J Chem Phys 2010; 132:244313. [PMID: 20590199 DOI: 10.1063/1.3456737] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Attachment of low-energy electrons to gas phase 9,10-anthraquinone (AQ) was observed with electron transmission (ET) spectroscopy, and interpreted with the support of quantum chemical calculations. The ET spectrum displays three shape resonances at 0.45, 0.7, and 2.2 eV, associated with temporary electron capture into empty pi( *) molecular orbitals of AQ, the first two anion states being stable. According to TD-B3LYP calculations, the first pi-pi( *) core-excited resonance lies at about 1.8 eV, although no experimental evidence for this anion state was found. The long-lived parent molecular anion [AQ](-) was observed by means of Electron Attachment Spectroscopy (EAS) using two different mass spectrometers and also by measuring the total anion current at the collision chamber walls. The molecular anion current shows maxima at zero energy, around 0.6 eV and at 1.8 eV. Association of these maxima with the corresponding resonant anion states is discussed. The experimentally measured electron detachment times from [AQ](-) as a function of the incident electron energy and the temperature of the target molecule show a pronounced change of slope around 1.5 eV, regardless of the temperature. This unexpected behavior can be qualitatively reproduced within the framework of a multiexponential approach which describes the electron detachment event in terms of a redistribution of the anion excess energy, regardless of the initial mechanism of temporary anion formation.
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Affiliation(s)
- Stanislav A Pshenichnyuk
- Institute of Physics of Molecules and Crystals, Ufa Research Center, Russian Academy of Sciences, October Avenue, 151, 450075 Ufa, Russia.
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