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Zorck WF, Pedersen MJ, Bols M. One-step synthesis of Ling's tetrol and its conversion into A,D-di- allo-α-cyclodextrin derivatives. Org Biomol Chem 2023; 21:8993-9004. [PMID: 37869763 DOI: 10.1039/d3ob01576a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2023]
Abstract
2A-F,3B,C,E,F,6B,C,E,F-Tetradeca-O-benzyl-α-cyclodextrin or Ling's tetrol is a unique α-cyclodextrin derivative that is partially protected with specific access points on both rims of the cyclodextrin structure. Ling's tetrol is therefore potentially useful for the synthesis of more complex and sophisticated enzyme models and supramolecular structures. However, the original synthesis gave only 10% yield after a reaction time of 4 days, and a recent improvement that gave 52% yield required two steps and a reaction time in one step of 6 days. Here, a single-step synthesis is reported where Ling's tetrol is obtained in a yield of 59% with a reaction time of 40 hours. 2A-F,3B,C,E,F,6B,C,E,F-Tetradeca-O-benzyl-α-cyclodextrin was subsequently converted into 6A,D-dicarboxy-3A,D-diepi-α-cyclodextrin, 3A,D-dioxo-α-cyclodextrin and 3A,D-diamino-3A,D-dideoxy-3A,D-diepi-α-cyclodextrin. The binding of these compounds to CH4 and CO2 was determined.
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Affiliation(s)
- Waldemar Frederik Zorck
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, 2100 København Ø, Denmark.
| | - Martin Jæger Pedersen
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, 2100 København Ø, Denmark.
| | - Mikael Bols
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, 2100 København Ø, Denmark.
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Yousefi NA, Zimmermann ML, Bols M. A study of the DIBAL-promoted selective debenzylation of α-cyclodextrin protected with two different benzyl groups. Beilstein J Org Chem 2022; 18:1553-1559. [DOI: 10.3762/bjoc.18.165] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2022] [Accepted: 11/09/2022] [Indexed: 11/19/2022] Open
Abstract
An α-cyclodextrin protected with 2,4-dichlorobenzyl groups on the primary alcohols and ordinary benzyl groups on the secondary alcohols was prepared and subjected to DIBAL (diisobutylaluminum hydride)-promoted selective debenzylation. Debenzylation proceeded by first removing two dichlorobenzyl groups from the 6A,D positions and then removing one or two benzyl groups from the 3A,D positions.
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Bols M, Friis V. Taming of the DIBAL Promoted Debenzylation of α‐Cyclodextrin. Kinetics, Substituent Effects and Efficient Synthesis of Lings Tetrol**. Chemistry 2022; 28:e202200564. [PMID: 35384086 PMCID: PMC9325365 DOI: 10.1002/chem.202200564] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2022] [Indexed: 11/07/2022]
Abstract
The kinetics of the reaction of perbenzyl α‐cyclodextrin was studied varying the concentration of DIBAL and substrate, and the temperature. The initial debenzylation was found to be 1st order in substrate and follow the relationship 0.0675+0.179[DIBAL]2 with respect to the concentration of DIBAL. The second and the third debenzylation which led to the 3A,6A,6D‐triol (Lings triol) were both found to be 1st order in substrate concentration and zero order in DIBAL concentration. Longer reaction times with DIBAL in high concentration gave further debenzylation to comparatively complex mixtures containing the 2B,3A,6A,6D‐tetrol and the 3A,6A,6C,6D‐tetrol. In contrast reaction at 0.1 M DIBAL gave the symmetrical 3A,6A,3D,6D‐tetrol (Lings tetrol) in 60 % yield. The effect of chlorine or methyl substitution of the phenyl groups of perbenzyl α‐cyclodextrin was also investigated. Per 4‐chlorobenzyl slowed down the reaction with DIBAL, while 4‐methylbenzyl increased the reaction rate, but still gave the corresponding 6 A‐monool or 6A,6D‐diol products. A Hammett reaction constant of −4.9 was found for the first debenzylation showing a high degree of positive charge in the transition state. The per(2,4‐dichlorobenzyl)‐α‐cyclodextrin‐derivative was completely resistant to DIBAL, however upon addition of trimethyl aluminium this derivative also reacted to give the 6A,6D‐diol product.
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Affiliation(s)
- Mikael Bols
- Department of chemistryUniversity of CopenhagenUniversitetsparken 52100CopenhagenDenmark
| | - Victor Friis
- Department of chemistryUniversity of CopenhagenUniversitetsparken 52100CopenhagenDenmark
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4
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Marino C, Bordoni AV. Deoxy sugars. General methods for carbohydrate deoxygenation and glycosidation. Org Biomol Chem 2022; 20:934-962. [PMID: 35014646 DOI: 10.1039/d1ob02001c] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Deoxy sugars represent an important class of carbohydrates, present in a large number of biomolecules involved in multiple biological processes. In various antibiotics, antimicrobials, and therapeutic agents the presence of deoxygenated units has been recognized as responsible for biological roles, such as adhesion or great affinity to receptors, or improved efficacy. The characterization of glycosidases and glycosyltranferases requires substrates, inhibitors and analogous compounds. Deoxygenated sugars are useful for carrying out specific studies for these enzymes. Deoxy sugars, analogs of natural substrates, may behave as substrates or inhibitors, or may not interact with the enzyme. They are also important for glycodiversification studies of bioactive natural products and glycobiological processes, which could contribute to discovering new therapeutic agents with greater efficacy by modification or replacement of sugar units. Deoxygenation of carbohydrates is, thus, of great interest and numerous efforts have been dedicated to the development of methods for the reduction of sugar hydroxyl groups. Given that carbohydrates are the most important renewable chemicals and are more oxidized than fossil raw materials, it is also important to have methods to selectively remove oxygen from certain atoms of these renewable raw materials. The different methods for removal of OH groups of carbohydrates and representative or recent applications of them are presented in this chapter. Glycosidic bonds in general, and 2-deoxy glycosidic linkages, are included. It is not the scope of this survey to cover all reports for each specific technique.
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Affiliation(s)
- Carla Marino
- CIHIDECAR, Departamento de Química Orgánica, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Pabellón II, Ciudad Universitaria, 1428 Buenos Aires, Argentina.
| | - Andrea V Bordoni
- Gerencia Química & Instituto de Nanociencia y Nanotecnología - Centro Atómico Constituyentes, Comisión Nacional de Energía Atómica, CONICET, Av. Gral. Paz 1499, B1650KNA San Martín, Buenos Aires, Argentina
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Zhang P, Hevey R, Ling CC. Total Synthesis of β-d-ido-Heptopyranosides Related to Capsular Polysaccharides of Campylobacter jejuni HS:4. J Org Chem 2017; 82:9662-9674. [DOI: 10.1021/acs.joc.7b01752] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Pengfei Zhang
- Alberta Glycomics Centre,
Department of Chemistry, University of Calgary, Calgary, Alberta T2N 1N4, Canada
| | - Rachel Hevey
- Alberta Glycomics Centre,
Department of Chemistry, University of Calgary, Calgary, Alberta T2N 1N4, Canada
| | - Chang-Chun Ling
- Alberta Glycomics Centre,
Department of Chemistry, University of Calgary, Calgary, Alberta T2N 1N4, Canada
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Abstract
The synthesis of novel cyanoethylated cyclodextrin derivatives from previously prepared intermediates is described. It was found the alcohols at the primary face of cyclodextrins readily react to add to acrylonitrile, but similar additions from hydroxyl groups of the secondary face appear to be more difficult. The obtained cyanides could be reduced to form the corresponding amines.
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Affiliation(s)
- Ramprasad Ghosh
- Alberta Glycomics Centre, Department of Chemistry, University of Calgary, 2500 University Drive NW, Calgary, AB T2N 1N4, Canada
- Alberta Glycomics Centre, Department of Chemistry, University of Calgary, 2500 University Drive NW, Calgary, AB T2N 1N4, Canada
| | - Moulimala Bhowmick
- Alberta Glycomics Centre, Department of Chemistry, University of Calgary, 2500 University Drive NW, Calgary, AB T2N 1N4, Canada
- Alberta Glycomics Centre, Department of Chemistry, University of Calgary, 2500 University Drive NW, Calgary, AB T2N 1N4, Canada
| | - Ping Zhang
- Alberta Glycomics Centre, Department of Chemistry, University of Calgary, 2500 University Drive NW, Calgary, AB T2N 1N4, Canada
- Alberta Glycomics Centre, Department of Chemistry, University of Calgary, 2500 University Drive NW, Calgary, AB T2N 1N4, Canada
| | - Chang-Chun Ling
- Alberta Glycomics Centre, Department of Chemistry, University of Calgary, 2500 University Drive NW, Calgary, AB T2N 1N4, Canada
- Alberta Glycomics Centre, Department of Chemistry, University of Calgary, 2500 University Drive NW, Calgary, AB T2N 1N4, Canada
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Ghosh R, Hennigan C, Ling CC. DIBAL-H-mediated O-desilylation with highly sterically hindered cyclodextrin substrates. Tetrahedron 2013. [DOI: 10.1016/j.tet.2013.04.047] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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9
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Pflueger I, Benito JM. Implementing the “Catch-and-Release” Concept into a Simple Method for Regioselective Cyclodextrin Modification. Org Lett 2013; 15:2354-7. [DOI: 10.1021/ol400641n] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Iris Pflueger
- Institute of Chemical Research (IIQ), CSIC - Universidad de Sevilla, Américo Vespucio 49, E-41092 Sevilla, Spain
| | - Juan M. Benito
- Institute of Chemical Research (IIQ), CSIC - Universidad de Sevilla, Américo Vespucio 49, E-41092 Sevilla, Spain
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Jouffroy M, Armspach D, Matt D, Toupet L. Regioselective di- and tetra-functionalisation of γ-cyclodextrin using capping methodology. Org Biomol Chem 2013; 11:3699-705. [DOI: 10.1039/c3ob40234g] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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11
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Zaborova E, Guitet M, Prencipe G, Blériot Y, Ménand M, Sollogoub M. An "against the rules" double bank shot with diisobutylaluminum hydride to allow triple functionalization of α-cyclodextrin. Angew Chem Int Ed Engl 2012; 52:639-44. [PMID: 23172810 DOI: 10.1002/anie.201204974] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2012] [Indexed: 11/06/2022]
Abstract
Frustration leads to overreaction: when diametrically opposed regioselective debenzylation is frustrated, an unexpected double debenzylation reaction affords original tetrafunctionalized cyclodextrins in a controlled and efficient manner. A rationale of the reaction is proposed based on a kinetic study.
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Affiliation(s)
- Elena Zaborova
- UPMC Univ Paris, Institut Universitaire de France, Institut Parisien de Chimie Moléculaire, UMR-CNRS, France
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Zaborova E, Guitet M, Prencipe G, Blériot Y, Ménand M, Sollogoub M. An “Against the Rules” Double Bank Shot with Diisobutylaluminum Hydride To Allow Triple Functionalization of α-Cyclodextrin. Angew Chem Int Ed Engl 2012. [DOI: 10.1002/ange.201204974] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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13
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Ghosh R, Zhang P, Wang A, Ling CC. Diisobutylaluminum Hydride Mediated Regioselective O Desilylations: Access to Multisubstituted Cyclodextrins. Angew Chem Int Ed Engl 2011; 51:1548-52. [DOI: 10.1002/anie.201105737] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2011] [Indexed: 11/12/2022]
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Ghosh R, Zhang P, Wang A, Ling CC. Diisobutylaluminum Hydride Mediated Regioselective O Desilylations: Access to Multisubstituted Cyclodextrins. Angew Chem Int Ed Engl 2011. [DOI: 10.1002/ange.201105737] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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Pastore A, Valerio S, Adinolfi M, Iadonisi A. An Easy and Versatile Approach for the Regioselective De-O-benzylation of Protected Sugars Based on the I2/Et3SiH Combined System. Chemistry 2011; 17:5881-9. [DOI: 10.1002/chem.201003332] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2010] [Indexed: 11/12/2022]
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Gramage-Doria R, Rodriguez-Lucena D, Armspach D, Egloff C, Jouffroy M, Matt D, Toupet L. Regioselective Double Capping of Cyclodextrin Scaffolds. Chemistry 2011; 17:3911-21. [DOI: 10.1002/chem.201002541] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2010] [Revised: 11/09/2010] [Indexed: 11/11/2022]
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17
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Rawal GK, Zhang P, Ling CC. Controlled Synthesis of Linear α-Cyclodextrin Oligomers Using Copper-Catalyzed Huisgen 1,3-Dipolar Cycloaddition. Org Lett 2010; 12:3096-9. [DOI: 10.1021/ol101119p] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Girish K. Rawal
- Alberta Ingenuity Centre for Carbohydrate Science, Department of Chemistry, University of Calgary, 2500, University Drive NW, Calgary, Alberta T2N 1N4 Canada
| | - Ping Zhang
- Alberta Ingenuity Centre for Carbohydrate Science, Department of Chemistry, University of Calgary, 2500, University Drive NW, Calgary, Alberta T2N 1N4 Canada
| | - Chang-Chun Ling
- Alberta Ingenuity Centre for Carbohydrate Science, Department of Chemistry, University of Calgary, 2500, University Drive NW, Calgary, Alberta T2N 1N4 Canada
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