Ether Naphthotube Host-Guest Complexes and [2]Rotaxanes with Dications

The interactions between ether naphthotube and a series of dication guests in organic solution were investigated. It was found that ether naphthotube formed stable host-guest complexes selectively with these guests in a 1 : 1 stoichiometric ratio with association constants ranging from 102 to 106 M-1, which were confirmed by 1H-NMR spectra and ITC experiments. The host-guest interactions are driven by enthalpy change as the entropic factors are unfavorable. Positive correlations between ΔH and ΔS have been observed in the host-guest complexes. Furthermore, the para-substitution of the guests can significantly affect the binding affinities through a combination of field/inductive and resonance effects by following a linear free energy relationship. Based on the host-guest complexes composed of ether naphthotube and organic cations, two interlocked [2]rotaxanes were prepared by cationization reaction and Huisgen cycloaddition between the cations and the stopper components. The ether naphthotube-based host-guest complexes are useful for creating sophisticated interlocked molecules.

A Structure-Adaptive Ligand: The Conformation Changes to Fit with the Lengths and Angles of Tetravalent Bis-Paraquat Guests

A flexible cylindrical cryptand (1b) with two m-phenylene-26-crown-8 ethers has been prepared, and its complexing properties with respect to tetravalent cationic bis-paraquat guests have been investigated. Diffusion-ordered spectroscopy nuclear magnetic resonance (NMR) and titration experiments using cold electrospray ionization mass spectrometry and ¹H NMR revealed that 1b has versatile complexing properties with respect to tetravalent cationic guests used despite the guest molecules' length and shape.

Purely Covalent Molecular Cages and Containers for Guest Encapsulation

Cage compounds offer unique binding pockets similar to enzyme-binding sites, which can be customized in terms of size, shape, and functional groups to point toward the cavity and many other parameters. Different synthetic strategies have been developed to create a toolkit of methods that allow preparing tailor-made organic cages for a number of distinct applications, such as gas separation, molecular recognition, molecular encapsulation, hosts for catalysis, etc. These examples show the versatility and high selectivity that can be achieved using cages, which is impossible by employing other molecular systems. This review explores the progress made in the field of fully organic molecular cages and containers by focusing on the properties of the cavity and their application to encapsulate guests.

Mechanically interlocked molecular handcuffs

The field of mechanically interlocked molecules that employ a handcuff component are reviewed. The variety of rotaxane and catenane structures that use the handcuff motif to interlock different components are discussed and a new nomenclature, distilling diverse terminologies to a single approach, is proposed. By unifying the interpretation of this class of molecules we identify new opportunities for employing this structural unit for new architectures.

Mechanically interlocked molecules that employ a handcuff component provide a pathway to highly unusual structures, a new nomenclature is proposed which helps to identify opportunities for employing this structural unit for new architectures.

Stable pseudo[3]rotaxanes with strong positive binding cooperativity based on shape-persistent aromatic oligoamide macrocycles

New aromatic oligoamide macrocycles with C₃-symmetry bind a bipyridinium guest (G) to form compact pseudo[3]rotaxanes involving interesting enthalpic and entropic contributions. The observed high stabilities and strong positive binding cooperativity are found in few other host-guest systems.

Enhancement of Alkali Metal Ion Recognition by Metalation of a Tris(saloph) Cryptand Having Benzene Rings at the Bridgeheads

A cryptand derivative, H₆L, which has three H₂saloph arms connected by two benzene ring bridgeheads, was synthesized and converted into the trinuclear metallocryptand, LNi₃. The nonmetalated host, H₆L, was found to bind to alkali metal ions (Na⁺, K⁺, Rb⁺, Cs⁺; logK_a = 3.37-6.67) in its well-defined cavity in DMSO/chloroform (1:9). The binding affinity was enhanced by 1-2 orders of magnitude upon the conversion into the metallocryptand, LNi₃, which can be explained by the more polarized phenoxo groups in the [Ni(saloph)] arms. The guest binding affinity of Na⁺ < K⁺ < Rb⁺ ≈ Cs⁺ was clearly demonstrated by the ¹H NMR competition experiments. The DFT calculations suggested that the Rb⁺ ion most suitably fit into the benzene-benzene spacing with a cation-π interaction and that only the largest Cs⁺ ion can almost equally interact with all six phenoxo oxygen donor atoms. The metallocryptand, LNi₃, also showed a strong binding affinity to Ag⁺ by taking advantage of cation-π interactions, which was confirmed by spectroscopic titrations and crystallographic analysis as well as DFT calculations. Thus, the well-defined three-dimensional cavity of LNi₃ was found to be suitable for strong binding with alkali metal ions as well as Ag⁺.

Efficient one-pot synthesis of [3]catenanes based on Pt(ii) metallacycles with a flexible building block

Three [3]catenanes were fabricated in high efficiency through the self-assembly of a 90° platinum(ii) receptor, a flexible bis(4,4′-bipyridinium) donor and a crown ether (DB24C8 or DB30C10).

Femtosecond excited state dynamics of stilbene-viologen complexes with a weakly pronounced charge transfer

The femtosecond dynamics of photoinduced electron transfers in supramolecular donor-acceptor complexes between (E)-bis(18-crown-6)stilbene (D) and tetraperchlorates of 2,7-di(2-ammonioethyl)(2,7-diazapyrenium) (A1), 3,3'-(E)-ethene-1,2-diylbis[1-(3-ammoniopropyl)pyridinium] (A2) and 4,4'-ethane-1,2-diylbis[1-(3-ammoniopropyl)pyridinium] (A3) was studied. The acceptors A2 and A3 are weak electron acceptors whose first reduction potentials are equal to -1.0 and -1.2 V (Ag), respectively, while A1 is a strong acceptor with a reduction potential of -0.42 V. It was shown that the back electron transfer time in CT-states of the complexes D·A2 and D·A3 is 30-40 ps, which is approximately 50 times greater than the analogous time for the charge transfer complexes studied earlier. The complex D·A1 is characterized by ultrafast back electron transfer (770 fs). The relaxation pathway of excited states of D·A1 depends on the wavelength of the excitation light. When excited at 356 nm, the accumulation of a transient locally excited (LE) state with a 250 fs lifetime was observed. But when excited at 425 nm, the formation of the LE-state was not observed.

Rotaxanes comprising cyclic phenylenedioxydiacetamides and secondary mono- and bis-dialkylammonium ions: effect of macrocyclic ring size on pseudorotaxane formation

[2]Rotaxanes, stabilized through multiple and cooperative hydrogen bonding system, were synthesized from dialkylammonium ions and macrocycle possessing two phenylenedioxydiacetamide units and appropriate spacers.

Biological and related applications of pillar[n]arenes

Pillar[n]arenes are a new class of synthetic supramolecular macrocycles streamlined by their particular pillar-shaped architecture which consists of an electron-rich cavity and two fine-tuneable rims. The ease and diversity of the functionalization of the two rims open possibilities for the design of new architectures, topological isomers, and scaffolds. Significantly, this emerging class of macrocyclic receptors offers a unique platform for biological purposes. This review article covers the most recent contributions from the pillar[n]arene field in terms of artificial membrane transport systems, controlled drug delivery systems, biomedical imaging, biosensors, cell adhesion, fluorescent sensing, and pesticide detection based on host-guest interactions. The review also uniquely describes the properties of sub-units that make pillar[n]arenes suitable for biological applications and it provides a detailed outline for the design of new innovative pillar-like structures with specific properties to open up a new avenue for pillar[n]arene chemistry.

Ion-pair electrostatic attraction-enhanced donor–acceptor interactions between the prototypic 1,4-dialkoxybenzene-viologen binding mode in water

Intermolecular ion-pair electrostatic attraction was demonstrated to remarkably enhance the donor–acceptor interaction between prototypic 1,4-dialkoxybenzene and viologen in water.

Complexation of molecular clips containing fragments of diphenylglycoluril and benzocrown ethers with paraquat and its derivatives

The complexation of molecular clips containing fragments of diphenylglycoluril and benzocrown ethers with paraquat and its derivatives has been studied both in solution and in the solid state. In this paper we studied the influence of the crown ether ring size and the nature of the substituents at the nitrogen atoms of the paraquat derivatives on the composition and stability of these complexes.

Femtosecond excited state dynamics of a stilbene–viologen charge transfer complex assembled via host–guest interaction

The ultrafast photoinduced electron transfer in a supramolecular charge transfer complex was studied.

Preparation and crystal structures of charge-transfer complexes of acyclic host molecules bearing pyrogallol derivatives with paraquat

The complexation of paraquat with adamantane-based molecules possessing two or three pyrogallol derivatives as acyclic host molecules afforded charge-transfer cocrystals with a 2 : 1 host : guest complexation stoichiometry through noncovalent interactions.

Macrocyclic shape-persistency of cyclo[6]aramide results in enhanced multipoint recognition for the highly efficient template-directed synthesis of rotaxanes

Examples of using two-dimensional shape-persistent macrocycles, i.e. those having noncollapsible and geometrically well-defined skeletons, for constructing mechanically interlocked molecules are scarce, which contrasts the many applications of these macrocycles in molecular recognition and functional self-assembly. Herein, we report the crucial role played by macrocyclic shape-persistency in enhancing multipoint recognition for the highly efficient template-directed synthesis of rotaxanes. Cyclo[6]aramides, with a near-planar conformation, are found to act as powerful hosts that bind bipyridinium salts with high affinities. This unique recognition module, composed of two macrocyclic molecules with one bipyridinium ion thread through the cavity, is observed both in the solid state and in solution, with unusually high binding constants ranging from ∼10¹³ M^-2 to ∼10¹⁵ M^-2 in acetone. The high efficacy of this recognition motif is embodied by the formation of compact [3]rotaxanes in excellent yields based on either a "click-capping" (91%) or "facile one-pot" (85%) approach, underscoring the great advantage of using H-bonded aromatic amide macrocycles for the highly efficient template-directed synthesis of mechanically interlocked structures. Furthermore, three cyclo[6]aramides bearing different peripheral chains 1-3 demonstrate high specificity in the synthesis of a [3]rotaxane from 1 and 2, and a [2]rotaxane from 3via a "facile one-pot" approach, in each case as the only isolated product. Analysis of the crystal structure of the [3]rotaxane reveals a highly compact binding mode that would be difficult to access using other macrocycles with a flexible backbone. Leveraging this unique recognition motif, resulting from the shape-persistency of these oligoamide macrocycles, in the template-directed synthesis of compact rotaxanes may open up new opportunities for the development of higher order interlocked molecules and artificial molecular machines.

Recent advances in the template-directed synthesis of porphyrin nanorings

This Feature Article reviews recent advances in the template-directed synthesis of porphyrin nanorings, including new templating methods, novel structures, and their applications in host–guest chemistry and artificial light-harvesting.

Supramolecular Polymerization Controlled by Reversible Conformational Modulation

We report a new method for fabricating supramolecular polymers with controlled structure and molecular weight through reversible conformational modulation. To this end, the crown-ether-based "taco complex" was introduced. We prepared a monomer containing a bis(m-phenylene)-32-crown-10 in the core, which can supramolecularly polymerize efficiently in solution. When the conformation of the crown ether core was folded into a taco complex, the linear supramolecular polymerization could be significantly depressed, thus decreasing the molecular weight of the supramolecular polymer. In addition, extracting the depolymerizing agent with aqueous solution of cucurbit[7]uril could disassociate the taco complex and regenerate the supramolecular polymer with molecular weight as high as before. It is anticipated that this study can provide a facile and general methodology for controllable supramolecular polymerization.

Multistimuli Sensitive Behavior of Novel Bodipy-Involved Pillar[5]arene-Based Fluorescent [2]Rotaxane and Its Supramolecular Gel

Fluorescent [2]rotaxane BC12P5 is successfully constructed with 1,4-diethoxypillar[5]arene as wheel over a long alkyl axle with Bodipy chromophore as one stopper for the first time. NMR spectra clearly reveal its molecular shuttle nature triggered by multiple external stimuli including solvent polarity and temperature. In particular, the fluorescence nature introduced into [2]rotaxane BC12P5 renders it a good sensor for the external stimuli. Nevertheless, the supramolecular gel successfully fabricated from this novel rotaxane system via self-assembly in dimethyl sulfoxide (DMSO) also shows reversible gel-sol phase transition upon multiple external stimuli such as heating/cooling, shaking/resting, or the addition of different anions. Interestingly, exposure of the supramolecular gel film to HCl or ammonia vapor induces the change in the film fluorescence intensity, endowing this system with a potential application in gas detecting.

Self-assembly of [3]catenanes and a [4]molecular necklace based on a cryptand/paraquat recognition motif

Hierarchical self-assembly centered on metallacyclic scaffolds greatly facilitates the construction of mechanically interlocked structures. The formation of two [3]catenanes and one [4]molecular necklace is presented by utilizing the orthogonality of coordination-driven self-assembly and crown ether-based cryptand/paraquat derivative complexation. The threaded [3]catenanes and [4]molecular necklace were fabricated by using ten and nine total molecular components, respectively, from four and three unique species in solution, respectively. In all cases single supramolecular ensembles were obtained, attesting to the high degree of structural complexity made possible via self-assembly approaches.

[2]Pseudorotaxane composed of heteroditopic macrobicycle and pyridine N-oxide based axle: recognition site dependent axle orientation

A strategy for threading an axle having a hydrogen bond acceptor unit in the cavity of a C3v symmetric amido-amine macrobicycle is investigated. The macrobicycle acts as a wheel in its neutral as well as triprotonated states to form threaded architectures with a pyridine N-oxide derivative. The negative oxygen dipole of the axle is capable of [2]pseudorotaxane formation in two different orientations with the wheel in its neutral and triprotonated states.

Cholate-based synthesis of size-tunable cage compounds

We describe cholate-based cage amphiphiles with a unique architecture that combines elements of structural rigidity and flexibility. The cage compounds are built by extending and bridging three polar chains underneath the concave steroid rings of cholate and capping with another rigid, symmetrically trifunctionalized cyanuric acid moiety. The connecting chains are varied to include, for instance, oligo(ethylene glycol) or chains containing 1,2,3-triazole units to present flexibility in the chemical and structural space and potentially deliver functional molecules for molecular recognition applications.

Diarylferrocene tweezers for cation binding

Diarylferrocenes can act as molecular tweezers of cations. Their unique molecular shape and low torsional potentials allow for strong binding of small cations in the gas phase.

PO functional group-containing cryptands: from supramolecular complexes to poly[2]pseudorotaxanes

Host–guest systems based on PO functional group-containing cryptands and the corresponding supramolecular poly[2]pseudorotaxanes with different shapes were constructed successfully.

Photo-responsive pseudorotaxanes and assemblies

Optical responses for understanding the dynamic conformational change(s) in solution during the stimuli responsive complexation and decomplexation process(es) in a supramolecular assembly.

A pillar[5]arene-fused cryptand: from orthogonal self-assembly to supramolecular polymer

A supramolecular polymer based on a novel pillar[5]arene-fused cryptand host was successfully constructed by the orthogonal self-assembly of two host–guest interactions.

Stimuli-responsive host-guest systems based on the recognition of cryptands by organic guests

CONSPECTUS: As the star compounds in host-guest chemistry, the syntheses of crown ethers proclaimed the birth of supramolecular chemistry. Crown ether-based host-guest systems have attracted great attention in self-assembly processes because of their good selectivity, high efficiency, and convenient responsiveness, enabling their facile application to the "bottom-up" approach for construction of functional molecular aggregates, such as artificial molecular machines, drug delivery materials, and supramolecular polymers. Cryptands, as preorganized derivatives of crown ethers, not only possess the above-mentioned properties but also have three-dimensional spatial structures and higher association constants compared with crown ethers. More importantly, the introduction of the additional arms makes cryptand-based host-guest systems responsive to more stimuli, which is crucial for the construction of adaptive or smart materials. In the past decade, we designed and synthesized crown ether-based cryptands as a new type of host for small organic guests with the purpose of greatly increasing the stabilities of the host-guest complexes and preparing mechanically interlocked structures and large supramolecular systems more efficiently while retaining or increasing their stimuli-responsiveness. Organic molecules such as paraquat derivatives and secondary ammonium salts have been widely used in the fabrication of functional supramolecular aggregates. Many host molecules including crown ethers, cyclodextrins, calixarenes, cucurbiturils, pillararenes, and cryptands have been used in the preparation of self-assembled structures with these guest molecules, but among them cryptands exhibit the best stabilities with paraquat derivatives in organic solvents due to their preorganization and additional and optimized binding sites. They enable the construction of sophisticated molecules or supramolecules in high yields, affording a very efficient way to fabricate stimuli-responsive functional supramolecular systems. This Account mainly focuses on the application of cryptands in the construction of mechanically interlocked molecules such as rotaxanes and catenanes, and stimuli-responsive host-guest systems such as molecular switches and supramolecular polymers due to their good host-guest properties. These cryptands are bicyclic derivatives of crown ethers, including dibenzo-24-crown-8, bis(m-phenylene)-26-crown-8, dibenzo-30-crown-10, and bis(m-phenylene)-32-crown-10. The length of the third arm has a very important influence on the binding strength of these cryptands with organic guests, because it affects not only the size fit between the host and the guest but also the distances and angles that govern the strengths of the noncovalent interactions between the host and the guest. For example, for bis(m-phenylene)-32-crown-10-based cryptands, a third arm of nine atoms is the best. The environmental responsiveness of these cryptand-based host-guest systems arises from either the crown ether units or the third arms. For example, a dibenzo-24-crown-8 unit introduces potassium cation responsiveness and an azobenzene group on the third arm imbues photoresponsiveness. We believe that studies on stimuli-responsive host-guest systems based on cryptands and organic guests will contribute significantly to future research on molecular devices, supramolecular polymers, and other functional supramolecular materials.

Iptycene-derived crown ether hosts for molecular recognition and self-assembly

CONSPECTUS: Synthetic macrocyclic hosts have played key roles in the development of host-guest chemistry. Crown ethers are a class of macrocyclic molecules with unique flexible structures. They have served as the first generation of synthetic hosts, and researchers have extensively studied them in molecular recognition. However, the flexible structures of simple crown ethers and their relatively limited modes of complexation with guests have limited the further applications of these molecules. In recent years, researchers have moved toward fabricating interlocking molecules, supramolecular polymers, and other assemblies with specific structures and properties. Therefore, researchers have developed more complex crown ether-based macrocyclic hosts with multicavity structures and multicomplexation modes that provide more diverse and sophisticated host-guest systems. In this Account, we summarize our research on the synthesis and characterization of iptycene-derived crown ether hosts, their use as host molecules, and their applications in self-assembled complexes. Iptycenes including triptycenes and pentiptycenes are a class of aromatic compounds with unique rigid three-dimensional structures. As a result, they are promising building blocks for the synthesis of novel macrocyclic hosts and the construction of novel self-assembled complexes with specific structures and properties. During the last several years, we have designed and synthesized a new class of iptycene-derived crown ether hosts including macrotricyclic polyethers, molecular tweezer-like hosts, and tritopic tris(crown ether) hosts, which are all composed of rigid iptycene building blocks linked by flexible crown ether chains. We have examined the complexation behavior of these hosts with different types of organic guest molecules. Unlike with conventional crown ethers, the combination of iptycene moieties and crown ether chains provides the iptycene-derived crown ether hosts with complexation properties that differ based on the structure of the guests. The rigid iptycene moieties within these synthetic host molecules both maintain their inherent three-dimensional cavities and generate multicavity structures. The flexible crown ether chains allow the iptycene-derived hosts to adjust their conformations as they encapsulate guest molecules. Moreover, the expanded complexation properties also allow the host-guest systems based on the iptycene-derived crown ethers to respond to multiple external stimuli, resulting in a variety of supramolecular assemblies. Finally, we also describe the construction of mechanically interlocked self-assemblies, molecular switches/molecular machines, and supramolecular polymers using these new host molecules. We expect that the unique structural features and diverse complexation properties of these iptycene-derived crown ether hosts will lead to increasing interest in this field and in supramolecular chemistry overall.