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Liu L, Ma X, Chang Y, Guo H, Wang W. Biosensors with Boronic Acid-Based Materials as the Recognition Elements and Signal Labels. BIOSENSORS 2023; 13:785. [PMID: 37622871 PMCID: PMC10452607 DOI: 10.3390/bios13080785] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2023] [Revised: 07/29/2023] [Accepted: 07/30/2023] [Indexed: 08/26/2023]
Abstract
It is of great importance to have sensitive and accurate detection of cis-diol-containing biologically related substances because of their important functions in the research fields of metabolomics, glycomics, and proteomics. Boronic acids can specifically and reversibly interact with 1,2- or 1,3-diols to form five or six cyclic esters. Based on this unique property, boronic acid-based materials have been used as synthetic receptors for the specific recognition and detection of cis-diol-containing species. This review critically summarizes the recent advances with boronic acid-based materials as recognition elements and signal labels for the detection of cis-diol-containing biological species, including ribonucleic acids, glycans, glycoproteins, bacteria, exosomes, and tumor cells. We also address the challenges and future perspectives for developing versatile boronic acid-based materials with various promising applications.
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Affiliation(s)
- Lin Liu
- College of Chemistry and Chemical Engineering, Anyang Normal University, Anyang 455000, China
| | - Xiaohua Ma
- Henan Key Laboratory of Biomolecular Recognition and Sensing, Shangqiu Normal University, Shangqiu 476000, China
| | - Yong Chang
- College of Chemistry and Chemical Engineering, Anyang Normal University, Anyang 455000, China
| | - Hang Guo
- College of Chemistry and Chemical Engineering, Anyang Normal University, Anyang 455000, China
| | - Wenqing Wang
- College of Chemistry and Chemical Engineering, Anyang Normal University, Anyang 455000, China
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2
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Colorimetric sensor array–smartphone–remote server coupling system for rapid detection of saccharides in beverages. JOURNAL OF THE IRANIAN CHEMICAL SOCIETY 2018. [DOI: 10.1007/s13738-018-1306-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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3
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Wang Y, Li Y, Bao X, Han J, Xia J, Tian X, Ni L. A smartphone-based colorimetric reader coupled with a remote server for rapid on-site catechols analysis. Talanta 2016; 160:194-204. [PMID: 27591604 DOI: 10.1016/j.talanta.2016.07.012] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2016] [Revised: 06/26/2016] [Accepted: 07/04/2016] [Indexed: 11/26/2022]
Abstract
The search of a practical method to analyze cis-diol-containing compounds outside laboratory settings remains a substantial scientific challenge. Herein, a smartphone-based colorimetric reader was coupled with a remote server for rapid on-site analysis of catechols. A smallest-scale 2×2 colorimetric sensor array composed of pH indicators and phenylboronic acid was configured. The array was able to distinguish 13 catechols at 6 serial concentrations, through simultaneous treatment via principal component analysis, hierarchical cluster analysis, and linear discriminant analysis. After both the discriminatory power of the array and the prediction ability of the partial least squares quantitative models were proved to be predominant, the smartphone was coupled to the remote server. All the ΔRGB data were uploaded to the remote server wherein linear discriminant analysis and partial least squares processing modules were established to provide qualitative discrimination and quantitative calculation, respectively, of the analytes in real time. The applicability of this novel method to a real-life scenario was confirmed by the on-site analysis of various catechols from a water sample of the Yangtze River; the feedback result in the smartphone showed the method was able to identify the catechols with 100% accuracy and predict the concentrations to within 0.706-2.240 standard deviation.
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Affiliation(s)
- Yun Wang
- School of Chemistry and Chemical Engineering, Jiangsu University, Zhenjiang 212013, PR China
| | - Yuanyuan Li
- School of Chemistry and Chemical Engineering, Jiangsu University, Zhenjiang 212013, PR China
| | - Xu Bao
- School of Computer and Communications Engineering, Jiangsu University, Zhenjiang 212013, PR China.
| | - Juan Han
- School of Food and Biological Engineering, Jiangsu University, Zhenjiang 212013, PR China.
| | - Jinchen Xia
- School of Chemistry and Chemical Engineering, Jiangsu University, Zhenjiang 212013, PR China
| | - Xiaoyu Tian
- School of Food and Biological Engineering, Jiangsu University, Zhenjiang 212013, PR China
| | - Liang Ni
- School of Chemistry and Chemical Engineering, Jiangsu University, Zhenjiang 212013, PR China
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4
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Resendez A, Panescu P, Zuniga R, Banda I, Joseph J, Webb DL, Singaram B. Multiwell Assay for the Analysis of Sugar Gut Permeability Markers: Discrimination of Sugar Alcohols with a Fluorescent Probe Array Based on Boronic Acid Appended Viologens. Anal Chem 2016; 88:5444-52. [PMID: 27116118 DOI: 10.1021/acs.analchem.6b00880] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Abstract
With the aim of discerning between different sugar and sugar alcohols of biomedical relevance, such as gut permeability, arrays of 2-component probes were assembled with up to six boronic acid-appended viologens (BBVs): 4,4'-o-BBV, 3,3'-o-BBV, 3,4'-o-BBV, 4,4'-o,m-BBV, 4,7'-o-PBBV, and pBoB, each coupled to the fluorophore 8-hydroxypyrene, 1,3,6-trisulfonic acid trisodium salt (HPTS). These probes were screened for their ability to discriminate between lactulose, l-rhamnose, 3-O-methyl-d-glucose, and xylose. Binding studies of sugar alcohols mannitol, sorbitol, erythritol, adonitol, arabitol, galactitol, and xylitol revealed that diols containing threo-1,2-diol units have higher affinity for BBVs relative diols containing erythro-1,2 units. Those containing both threo-1,2- and 1,3-syn diol motifs showed high affinity for boronic acid binding. Fluorescence from the arrays were examined by principle component analysis (PCA) and linear discriminant analysis (LDA). Arrays with only three BBVs sufficed to discriminate between sugars (e.g., lactulose) and sugar alcohols (e.g., mannitol), establishing a differential probe. Compared with 4,4'-o-BBV, 2-fold reductions in lower limits of detection (LOD) and quantification (LOQ) were achieved for lactulose with 4,7-o-PBBV (LOD 41 μM, LOQ 72 μM). Using a combination of 4,4'-o-BBV, 4,7-o-PBBV, and pBoB, LDA statistically segregated lactulose/mannitol (L/M) ratios from 0.1 to 0.5, consistent with values encountered in small intestinal permeability tests. Another triad containing 3,3'-o-BBV, 4,4'-o-BBV, and 4,7-o-PBBV also discerned similar L/M ratios. This proof-of-concept demonstrates the potential for BBV arrays as an attractive alternate to HPLC to analyze mixtures of sugars and sugar alcohols in biomedical applications and sheds light on structural motifs that make this possible.
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Affiliation(s)
- Angel Resendez
- Department of Chemistry and Biochemistry, University of California Santa Cruz , Santa Cruz, California 95064, United States
| | - Priera Panescu
- Department of Chemistry and Biochemistry, University of California Santa Cruz , Santa Cruz, California 95064, United States
| | - Ruth Zuniga
- Department of Chemistry and Biochemistry, University of California Santa Cruz , Santa Cruz, California 95064, United States
| | - Isaac Banda
- Department of Chemistry and Biochemistry, University of California Santa Cruz , Santa Cruz, California 95064, United States
| | - Jorly Joseph
- IIRBS, Mahatma Gandhi University , Kottayam, 686560, India
| | - Dominic-Luc Webb
- Department of Chemistry and Biochemistry, University of California Santa Cruz , Santa Cruz, California 95064, United States.,Department of Medical Sciences, Gastroenterology and Hepatology, Uppsala University , 751 85, Uppsala, Sweden
| | - Bakthan Singaram
- Department of Chemistry and Biochemistry, University of California Santa Cruz , Santa Cruz, California 95064, United States
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5
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Wang Y, Li Y, Liu Y, Han J, Xia J, Bao X, Ni L, Tang X. A mobile laboratory for rapid on-site analysis of catechols from water samples with real-time results production. RSC Adv 2016. [DOI: 10.1039/c6ra12052k] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022] Open
Abstract
A smartphone was coupled with a remote server to analyze catechols from water samples on-site with real-time results production.
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Affiliation(s)
- Yun Wang
- School of Chemistry and Chemical Engineering
- Jiangsu University
- Zhenjiang 212013
- PR China
| | - Yuanyuan Li
- School of Chemistry and Chemical Engineering
- Jiangsu University
- Zhenjiang 212013
- PR China
| | - Yan Liu
- School of Chemistry and Chemical Engineering
- Jiangsu University
- Zhenjiang 212013
- PR China
| | - Juan Han
- School of Food and Biological Engineering
- Jiangsu University
- Zhenjiang 212013
- PR China
| | - Jinchen Xia
- School of Chemistry and Chemical Engineering
- Jiangsu University
- Zhenjiang 212013
- PR China
| | - Xu Bao
- School of Computer and Communications Engineering
- Jiangsu University
- Zhenjiang 212013
- PR China
| | - Liang Ni
- School of Chemistry and Chemical Engineering
- Jiangsu University
- Zhenjiang 212013
- PR China
| | - Xu Tang
- School of Chemistry and Chemical Engineering
- Jiangsu University
- Zhenjiang 212013
- PR China
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Bishnoi S, Milton MD. Tunable phenothiazine hydrazones as colour displaying, ratiometric and reversible pH sensors. Tetrahedron Lett 2015. [DOI: 10.1016/j.tetlet.2015.10.041] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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7
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Affiliation(s)
- Xiaolong Sun
- Department
of Chemistry, University of Bath, Bath, BA2 7AY, United Kingdom
| | - Tony D. James
- Department
of Chemistry, University of Bath, Bath, BA2 7AY, United Kingdom
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8
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Lee JS, Lee JW, Kang N, Ha HH, Chang YT. Diversity-Oriented Approach for Chemical Biology. CHEM REC 2015; 15:495-510. [DOI: 10.1002/tcr.201402087] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2014] [Indexed: 11/08/2022]
Affiliation(s)
- Jun-Seok Lee
- Molecular Recognition Research Center; Korea Institute of Science and Technology (KIST); 39-1 Hawolgok-dong Seoul 136-791 Republic of Korea
- Department of Biological Chemistry; University of Science and Technology (UST); 113 Gwahank-ro, Yuseong-gu Daejeon 305-333 Republic of Korea
| | - Jae Wook Lee
- Natural Product Research Center; Korea Institute of Science and Technology (KIST); 679 Saimdang-ro Gangneung Ganwon-do 210-340 Republic of Korea
- Department of Biological Chemistry; University of Science and Technology (UST); 113 Gwahank-ro, Yuseong-gu Daejeon 305-333 Republic of Korea
| | - Namyoung Kang
- Lab of Bioimaging Probe Development; Singapore Bioimaging Consortium (SBIC), 11 Biopolis Way, #02-02 Helios; Agency for Science, Technology and Research (A*STAR); Singapore 138667 Singapore
| | - Hyung-Ho Ha
- College of Pharmacy; Sunchon National University; Sunchon 540-742 Republic of Korea
| | - Young-Tae Chang
- Lab of Bioimaging Probe Development; Singapore Bioimaging Consortium (SBIC), 11 Biopolis Way, #02-02 Helios; Agency for Science, Technology and Research (A*STAR); Singapore 138667 Singapore
- Department of Chemistry and Medicinal Chemistry Program; National University of Singapore (NUS); 3 Science Drive 3 Singapore 117543 Singapore
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9
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Kaushik R, Kumar P, Ghosh A, Gupta N, Kaur D, Arora S, Jose DA. Alizarin red S–zinc(ii) fluorescent ensemble for selective detection of hydrogen sulphide and assay with an H2S donor. RSC Adv 2015. [DOI: 10.1039/c5ra11901d] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
A new Alizarin Red S based fluorescent ensemble ARS–Zn(ii) for the selective detection of H2S is reported. It exhibited H2S selectivity and also detected H2S in serum under physiological conditions. The calculated detection limit of H2S was 92 nM.
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Affiliation(s)
| | | | | | - Neha Gupta
- Department of Chemistry
- Guru Nanak Dev University
- Amritsar
- India
| | - Davinder Kaur
- Department of Botanical and Environmental Sciences
- Guru Nanak Dev University
- Amritsar
- India
| | - Saroj Arora
- Department of Botanical and Environmental Sciences
- Guru Nanak Dev University
- Amritsar
- India
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10
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Xu W, Ren C, Teoh CL, Peng J, Gadre SH, Rhee HW, Lee CLK, Chang YT. An Artificial Tongue Fluorescent Sensor Array for Identification and Quantitation of Various Heavy Metal Ions. Anal Chem 2014; 86:8763-9. [DOI: 10.1021/ac501953z] [Citation(s) in RCA: 68] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Wang Xu
- Department of Chemistry & MedChem Program of Life Sciences Institute, National University of Singapore, Singapore 117543
- Singapore
Peking
Oxford Research Enterprise (SPORE), Environmental Research Institute (NERI), 5A Engineering Drive 1, #02-01, Singapore 117411
| | - Changliang Ren
- Institute of Materials
Research and Engineering, Agency for Science, Technology and Research (A*STAR), Singapore 117602
| | - Chai Lean Teoh
- Department of Chemistry & MedChem Program of Life Sciences Institute, National University of Singapore, Singapore 117543
| | - Juanjuan Peng
- Department of Chemistry & MedChem Program of Life Sciences Institute, National University of Singapore, Singapore 117543
| | | | - Hyun-Woo Rhee
- Department
of Chemistry, School of Nano-Biosceince and Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), Ulsan 689-798, Korea
| | - Chi-Lik Ken Lee
- Centre for Biomedical and
Life Sciences, Technology Development Office, Singapore Polytechnic, Singapore 139651
| | - Young-Tae Chang
- Department of Chemistry & MedChem Program of Life Sciences Institute, National University of Singapore, Singapore 117543
- Singapore Bioimaging
Consortium, Agency for Science, Technology and Research (A*STAR), Singapore 138667
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11
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Askim JR, Mahmoudi M, Suslick KS. Optical sensor arrays for chemical sensing: the optoelectronic nose. Chem Soc Rev 2014; 42:8649-82. [PMID: 24091381 DOI: 10.1039/c3cs60179j] [Citation(s) in RCA: 466] [Impact Index Per Article: 46.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
A comprehensive review is presented on the development and state of the art of colorimetric and fluorometric sensor arrays. Optical arrays based on chemoresponsive colorants (dyes and nanoporous pigments) probe the chemical reactivity of analytes, rather than their physical properties. This provides a high dimensionality to chemical sensing that permits high sensitivity (often down to ppb levels), impressive discrimination among very similar analytes and exquisite fingerprinting of extremely similar mixtures over a wide range of analyte types, both in the gas and liquid phases.
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Affiliation(s)
- Jon R Askim
- Department of Chemistry, University of Illinois at Urbana-Champaign, 600 S. Mathews Av., Urbana, Illinois 61801, USA.
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12
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Barman S, Diehl KL, Anslyn EV. The effect of alkylation, protonation, and hydroxyl group substitution on reversible alcohol and water addition to 2- and 4-formyl pyridine derivatives. RSC Adv 2014. [DOI: 10.1039/c4ra03466j] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
The regiochemical influence of hydroxyl or methoxy substitution on 2- and 4-formyl pyridine derivatives upon alcohol and water addition was studied.
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Affiliation(s)
| | | | - Eric V. Anslyn
- Department of Chemistry
- The University of Texas
- Austin, USA
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13
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Teichert JF, Mazunin D, Bode JW. Chemical Sensing of Polyols with Shapeshifting Boronic Acids As a Self-Contained Sensor Array. J Am Chem Soc 2013; 135:11314-21. [DOI: 10.1021/ja404981q] [Citation(s) in RCA: 75] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Johannes F. Teichert
- Department of Chemistry and Applied
Biosciences, Laboratorium
für Organische Chemie, ETH Zürich, Wolfgang Pauli Strasse 10, 8093 Zürich, Switzerland
| | - Dmitry Mazunin
- Department of Chemistry and Applied
Biosciences, Laboratorium
für Organische Chemie, ETH Zürich, Wolfgang Pauli Strasse 10, 8093 Zürich, Switzerland
| | - Jeffrey W. Bode
- Department of Chemistry and Applied
Biosciences, Laboratorium
für Organische Chemie, ETH Zürich, Wolfgang Pauli Strasse 10, 8093 Zürich, Switzerland
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14
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Whyte GF, Vilar R, Woscholski R. Molecular recognition with boronic acids-applications in chemical biology. J Chem Biol 2013; 6:161-74. [PMID: 24432132 PMCID: PMC3787204 DOI: 10.1007/s12154-013-0099-0] [Citation(s) in RCA: 79] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2013] [Accepted: 05/19/2013] [Indexed: 01/14/2023] Open
Abstract
Small molecules have long been used for the selective recognition of a wide range of analytes. The ability of these chemical receptors to recognise and bind to specific targets mimics certain biological processes (such as protein-substrate interactions) and has therefore attracted recent interest. Due to the abundance of biological molecules possessing polyhydroxy motifs, boronic acids-which form five-membered boronate esters with diols-have become increasingly popular in the synthesis of small chemical receptors. Their targets include biological materials and natural products including phosphatidylinositol bisphosphate, saccharides and polysaccharides, nucleic acids, metal ions and the neurotransmitter dopamine. This review will focus on the many ways in which small chemical receptors based on boronic acids have been used as biochemical tools for various purposes, including sensing and detection of analytes, interference in signalling pathways, enzyme inhibition and cell delivery systems. The most recent developments in each area will be highlighted.
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Affiliation(s)
- Gillian F. Whyte
- Institute of Chemical Biology and Department of Chemistry, Imperial College London, London, UK
| | - Ramon Vilar
- Institute of Chemical Biology and Department of Chemistry, Imperial College London, London, UK
| | - Rudiger Woscholski
- Institute of Chemical Biology and Department of Chemistry, Imperial College London, London, UK
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15
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Karakuş E, Üçüncü M, Eanes RC, Emrullahoğlu M. The utilization of pH sensitive spirocyclic rhodamine dyes for monitoring D-fructose consumption during a fermentation process. NEW J CHEM 2013. [DOI: 10.1039/c3nj00613a] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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16
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Vendrell M, Zhai D, Er JC, Chang YT. Combinatorial strategies in fluorescent probe development. Chem Rev 2012; 112:4391-420. [PMID: 22616565 DOI: 10.1021/cr200355j] [Citation(s) in RCA: 462] [Impact Index Per Article: 38.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- Marc Vendrell
- Laboratory of Bioimaging Probe Development, Singapore Bioimaging Consortium, Agency for Science, Technology and Research (A*STAR), 11 Biopolis Way, 138667 Singapore.
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Kim E, Lee S, Park SB. 9-Aryl-1,2-dihydropyrrolo[3,4-b]indolizin-3-one (Seoul-Fluor) as a smart platform for colorful ratiometric fluorescent pH sensors. Chem Commun (Camb) 2011; 47:7734-6. [DOI: 10.1039/c1cc12618k] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
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