Selective fluorometric detection of pyrophosphate by interaction with alizarin red S-dimethyltin(IV) complex

Bio-inspired Track-Etched Polymeric Nanochannels: Steady-State Biosensors for Detection of Analytes

Bio-inspired polymeric nanochannel (also referred as nanopore)-based biosensors have attracted considerable attention on account of their controllable channel size and shape, multi-functional surface chemistry, unique ionic transport properties, and good robustness for applications. There are already very informative reviews on the latest developments in solid-state artificial nanochannel-based biosensors, however, which concentrated on the resistive-pulse sensing-based sensors for practical applications. The steady-state sensing-based nanochannel biosensors, in principle, have significant advantages over their counterparts in term of high sensitivity, fast response, target analytes with no size limit, and extensive suitable range. Furthermore, among the diverse materials, nanochannels based on polymeric materials perform outstandingly, due to flexible fabrication and wide application. This compressive Review summarizes the recent advances in bio-inspired polymeric nanochannels as sensing platforms for detection of important analytes in living organisms, to meet the high demand for high-performance biosensors for analysis of target analytes, and the potential for development of smart sensing devices. In the future, research efforts can be focused on transport mechanisms in the field of steady-state or resistive-pulse nanochannel-based sensors and on developing precisely size-controlled, robust, miniature and reusable, multi-functional, and high-throughput biosensors for practical applications. Future efforts should aim at a deeper understanding of the principles at the molecular level and incorporating these diverse pore architectures into homogeneous and defect-free multi-channel membrane systems. With the rapid advancement of nanoscience and biotechnology, we believe that many more achievements in nanochannel-based biosensors could be achieved in the near future, serving people in a better way.

Simple Colorimetric Chemosensor Array for Oxyanions: Quantitative Assay for Herbicide Glyphosate

Although the determination of oxyanions due to correlation with metabolic processes and diseases is in high demand, most of the developed methods are suffering from a shortage of a capability of on-site analysis, sensitivity, and user-friendliness. This paper introduces the first colorimetric chemosensor array targeting various anions including glyphosate. The proposed sensor benefits from some notable features such as utilizing only commercially available reagents, recognizing similarly structured compounds by biomaterial-free sensors, and providing a fingerprint-like response originating from pattern recognition. The detection mechanism is based on an anion sensing strategy named coordination binding-based sensor array (CBSA). In CBSA, competitive coordinative bonding of a metal ion (Zn2+) between a catechol dye (i.e., indicator) and target anions occurs, and changes in the optical properties of the dye represent the target's concentration. For data processing, two chemometrical techniques including linear discrimination analysis (LDA) and an artificial neural network (ANN) for pattern classification and regression/prediction purposes were successfully employed, respectively. Finally, the proposed chemosensor was subjected to glyphosate samples (commercial herbicide and tap water samples) and produced satisfactory results.

Signal-on fluorescence assay for pyrophosphate ions based on DNA-stabilized silver nanoclusters

Pyrophosphate anion (P₂ O₇ ^4- , PPi) is considered as a potential biomarker for arthritic diseases because high levels of PPi may result in calcium pyrophosphate dehydrate crystal deposition diseases. In this study, a simple fluorescence method for PPi was demonstrated by organic integration of the efficient fluorescence quenching ability of copper ions to DNA-scaffolded silver nanoclusters and the strong affinity of PPi towards copper ions. This simple fluorescence sensor showed a low detection limit (0.28 μM based on signal/noise = 3) towards the detection of PPi. Practical application of this method was also validated by detection of PPi in the synovial fluid.

Spectrophotometric, fluorimetric and electrochemical selective pyrophosphate/ATP sensing based on the dimethyltin(IV)-tiron system

Sensing of pyrophosphate anion (PPi) in the presence of nucleotide triphosphates allows the real time monitoring of the polymerase chain reaction. To get a deeper understanding of the factors involved in PPi/nucleotide triphosphate discrimination, a detailed study on the performance of a dimethyltin (IV)-catecholate complex capable of both separate fluorimetric or electrochemical detection of PPi in the presence of adenosine triphosphate (ATP) has been undertaken. Dimethyltin (IV) tightly binds PPi or ATP, and forms a stable 1:1 complex with tiron (4,5-dihydroxy-1,3-benzenedisulfonic acid) in water. The complexation equilibria with all components are characterized quantitatively by potentiometric and spectroscopic titrations. Pyrophosphate anion can be detected owing to its ability to release free tiron from the complex by measuring either a fluorimetric or an electrochemical signal. On the contrary, ATP does not displace tiron but causes an interference with PPi in the fluorimetric detection method due to the formation of a ternary Me₂Sn(IV)-tiron-ATP complex with optical properties intermediate between those of free and bound tiron. In the electrochemical (square wave voltammetry) method, the ternary ATP complex shows a separate peak which does not coincide with the peaks of neither free nor bound tiron, thus making possible the simultaneous detection of ATP in addition to PPi.

Organotin(iv) differential fluorescent probe for controlled subcellular localization and nuclear microviscosity monitoring

A dual-emissive fluorescent probe based on the organotin(iv) ion enabled unique tracking of the local microviscosity through a differential and controlled nuclear–cytosolic redistribution.

Fluorescent organotin compounds as dyes in silk fibroin (Bombyx mori): ultrasound-assisted synthesis, chemo-optical characterization, cytotoxicity, and confocal fluorescence microscopy

The fluorescent silk fibroin (FSF) is useful in a number of biomedical applications.

Fluorescence and Nonlinear Optical Properties of Alizarin Red S in Solvents and Droplet

The enhancement of the nonlinear properties of materials is an interesting topic since it has many applications in optical devices and medicines. The Z-scan technique was used to study the values of the two-photon absorption (β), second-order molecular hyperpolarizability (γ_R), third-order susceptibility (χ_R), and nonlinear refractive index (n₂) of Alizarin Red S in different media using a continuous-wave diode-pump laser radiation at 532 nm. For Alizarin Red S in a droplet, the β, n₂, χ_R, and γ_R were estimated at the order of 10^-7 cm²/W and 10^-12 cm/W, 10^-3 m³ W^-1 s^-1 and 10^-24 m⁶ W^-1 s^-1, respectively. The results indicated that the values of β and n₂ reduced, whereas the values of χ_R and γ_R were enhanced when the solvent was changed from droplet to water, DMF, and dimethyl sulfoxide due to the change in the solvent's dielectric constant (ε). Moreover, the values of β were enhanced by an increase in the concentration of the surfactant in the aqueous solution. The absorption spectra of Alizarin Red S in the aqueous solution was observed at 428 nm, and a few red shifts in the absorption spectra were observed with a reduction in the dielectric constant of the medium. The same effect was observed in the absorption spectra of Alizarin Red S in the droplet when the bulk dielectric constant reduced. The dielectric constant can affect the fluorescence spectra of Alizarin Red S when the solution is changed from water to dimethyl sulfoxide. The dipole moments of Alizarin Red S in the different media were studied using the quantum perturbation theory.

Electrochemical and spectroscopic insights of interactions between alizarin red S and arsenite ions

ARS molecules are deprotonated in the presence of arsenite ions. The deprotonated form of ARS molecules show increase of charge transfer resistance and decrease of diffusion coefficient.

Fluorescent and colorimetric chemosensors for pyrophosphate

In this review, we will cover the fluorescent and colorimetric chemosensors developed for the detection of pyrophosphate (PPi) since 2010.

Alizarin red S–zinc(ii) fluorescent ensemble for selective detection of hydrogen sulphide and assay with an H2S donor

A new Alizarin Red S based fluorescent ensemble ARS–Zn(ii) for the selective detection of H₂S is reported. It exhibited H₂S selectivity and also detected H₂S in serum under physiological conditions. The calculated detection limit of H₂S was 92 nM.

Chromogenic and fluorogenic chemosensors and reagents for anions. A comprehensive review of the years 2010-2011

This review focuses on examples reported in the years 2010-2011 dealing with the design of chromogenic and fluorogenic chemosensors or reagents for anions.

Pyrophosphate selective fluorescent probe and molecular flip-flop

Highly selective detection of pyrophosphate in the presence of inorganic phosphates, halides, acetate, ATP, other nucleotides in neutral aqueous solutions is achieved by a fluorescent Zn-ensemble based system. The implementation of the first molecule based JK-latch sequential logic function is also described.

Highly selective visual distinction of pyrophosphate from other phosphate anions with 4-[(5-chloro-2-pyridyl)azo]-1,3-diaminobenzene in the presence of copper(II) ions

Pyrophosphate (PPi), as a biologically related phosphate anion, plays very important roles in organisms. Here, a highly selective visual method for distinction of PPi was made with commercial available 4-[(5-chloro-2-pyridyl)azo]-1,3-diaminobenzene (5-Cl-PADAB) in the presence of copper(II). The yellow solution of 5-Cl-PADAB exhibits strong absorption at 450.5 nm, and addition of Cu(II) results in a red solution with a new absorption band at 506.0 nm. Upon titration with PPi, the absorption band at 506.0 nm decreases with blueshift, while another new absorption band in the region from 562.0 nm to 750.0 nm appears which gradually splits into two peaks, and the color accordingly changes from red to cyan. Further addition of PPi, the new absorption peaks gradually disappear, and the mixture shows the absorption of 5-Cl-PADAB and recovers to yellow from cyan. This process is highly selective for PPi since other phosphate anions such as nucleotides cannot induce such spectral and color changes. With this method, the detection of PPi concentration in human urine was made with satisfactory results.

Highly selective colorimetric sensing pyrophosphate in water by a NBD-phenoxo-bridged dinuclear Zn(II) complex

A novel NBD-phenoxo-bridged dinuclear Zn(II) complex is found to be an effective colorimetric sensor for pyrophosphate (PPi) in pure aqueous solution over a wide pH range. This sensor shows high binding affinity (K(a)≈ 3 × 10(8) M(-1)) and high selectivity for PPi, and can be also used to assay the activity of pyrophosphatase in real time.

A novel NIR fluorescent turn-on sensor for the detection of pyrophosphate anion in complete water system

A novel fluorescent sensor DCAA-Cu(2+) was developed, showing turn-on fluorescence in NIR region with high selectivity to pyrophosphate anion in 100% aqueous solution.