1
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Bailly T, Bodin S, Goncalves V, Denat F, Morgat C, Prignon A, Valverde IE. Modular One-Pot Strategy for the Synthesis of Heterobivalent Tracers. ACS Med Chem Lett 2023; 14:636-644. [PMID: 37197474 PMCID: PMC10184157 DOI: 10.1021/acsmedchemlett.3c00057] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2023] [Accepted: 04/10/2023] [Indexed: 05/19/2023] Open
Abstract
Bivalent ligands, i.e., molecules having two ligands covalently connected by a linker, have been gathering attention since the first description of their pharmacological potential in the early 80s. However, their synthesis, particularly of labeled heterobivalent ligands, can still be cumbersome and time-consuming. We herein report a straightforward procedure for the modular synthesis of labeled heterobivalent ligands (HBLs) using dual reactive 3,6-dichloro-1,2,4,5-tetrazine as a starting material and suitable partners for sequential SNAr and inverse electron-demand Diels-Alder (IEDDA) reactions. This assembly method conducted in a stepwise or in a sequential one-pot manner provides quick access to multiple HBLs. A conjugate combining ligands toward the prostate-specific membrane antigen (PSMA) and the gastrin-releasing peptide receptor (GRPR) was radiolabeled, and its biological activity was assessed in vitro and in vivo (receptor binding affinity, biodistribution, imaging) as an illustration that the assembly methodology preserves the tumor targeting properties of the ligands.
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Affiliation(s)
- Thibaud Bailly
- Institut
de Chimie Moléculaire de l’Université de Bourgogne,
UMR CNRS 6302, Université de Bourgogne, 21000 Dijon, France
| | - Sacha Bodin
- University
of Bordeaux, CNRS, EPHE, INCIA, UMR 5287, Bordeaux F-33000, France
| | - Victor Goncalves
- Institut
de Chimie Moléculaire de l’Université de Bourgogne,
UMR CNRS 6302, Université de Bourgogne, 21000 Dijon, France
| | - Franck Denat
- Institut
de Chimie Moléculaire de l’Université de Bourgogne,
UMR CNRS 6302, Université de Bourgogne, 21000 Dijon, France
| | - Clément Morgat
- University
of Bordeaux, CNRS, EPHE, INCIA, UMR 5287, Bordeaux F-33000, France
- Nuclear
Medicine Department, University Hospital
of Bordeaux, Bordeaux F-33000, France
| | - Aurélie Prignon
- UMS28
Laboratoire d’Imagerie Moléculaire Positonique (LIMP), Sorbonne Université, Paris 75020, France
| | - Ibai E. Valverde
- Institut
de Chimie Moléculaire de l’Université de Bourgogne,
UMR CNRS 6302, Université de Bourgogne, 21000 Dijon, France
- Mailing
Address: Ibai E. Valverde,
Institut de Chimie Moléculaire de L’Université
de Bourgogne, UMR 6302, Univ. Bourgogne Franche-Comté, 9, Avenue
Alain Savary, 21078 Dijon Cedex, France; , Phone: +33 380 39 90 48
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2
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Kumar K, Agrahari AK, Pratap R, Tiwari VK, Bhattacharya S. Synthesis and structural features of a series of Cu( i) furan-2-thiocarboxylate complexes: efficient “click” catalysts for the synthesis of glycoconjugates and glycocluster. NEW J CHEM 2022. [DOI: 10.1039/d2nj03433f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A series of phosphinecopper(i) thiocarboxylates have been synthesized and characterized structurally. These complexes act as efficient catalysts for the 'click' azide–alkyne cycloaddition leading to glycoconjugates and a glycocluster.
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Affiliation(s)
- Krishna Kumar
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi-221005, India
| | - Anand K. Agrahari
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi-221005, India
| | - Rajesh Pratap
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi-221005, India
| | - Vinod K. Tiwari
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi-221005, India
| | - Subrato Bhattacharya
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi-221005, India
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3
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Canovas C, Moreau M, Vrigneaud JM, Bellaye PS, Collin B, Denat F, Goncalves V. Modular Assembly of Multimodal Imaging Agents through an Inverse Electron Demand Diels-Alder Reaction. Bioconjug Chem 2019; 30:888-897. [PMID: 30742423 DOI: 10.1021/acs.bioconjchem.9b00017] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
The combination of two imaging probes on the same biomolecule gives access to targeted bimodal imaging agents that can provide more accurate diagnosis, complementary information, or that may be used in different applications, such as nuclear imaging and fluorescence guided surgery. In this study, we demonstrate that dichlorotetrazine, a small, commercially available compound, can be used as a modular platform to easily assemble various imaging probes. Doubly labeled tetrazines can then be conjugated to a protein through a biorthogonal IEDDA reaction. A series of difunctionalized tetrazine compounds containing various chelating agents and fluorescent dyes was synthesized. As a proof of concept, one of these bimodal probes was conjugated to trastuzumab, previously modified with a constrained alkyne group, and the resulting dual-labeled antibody was evaluated in a mouse model, bearing a HER2-positive tumor. A significant uptake into tumor tissues was observed in vivo, by both SPECT-CT and fluorescence imaging, and confirmed ex vivo in biodistribution studies.
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Affiliation(s)
- Coline Canovas
- Institut de Chimie Moléculaire de l'Université de Bourgogne, UMR6302, CNRS , Université Bourgogne Franche-Comté , 9 avenue Alain Savary , 21000 , Dijon , France
| | - Mathieu Moreau
- Institut de Chimie Moléculaire de l'Université de Bourgogne, UMR6302, CNRS , Université Bourgogne Franche-Comté , 9 avenue Alain Savary , 21000 , Dijon , France
| | - Jean-Marc Vrigneaud
- Georges-François LECLERC Cancer Center - UNICANCER , 1 rue Pr Marion , 21079 , Dijon , France
| | - Pierre-Simon Bellaye
- Georges-François LECLERC Cancer Center - UNICANCER , 1 rue Pr Marion , 21079 , Dijon , France
| | - Bertrand Collin
- Institut de Chimie Moléculaire de l'Université de Bourgogne, UMR6302, CNRS , Université Bourgogne Franche-Comté , 9 avenue Alain Savary , 21000 , Dijon , France.,Georges-François LECLERC Cancer Center - UNICANCER , 1 rue Pr Marion , 21079 , Dijon , France
| | - Franck Denat
- Institut de Chimie Moléculaire de l'Université de Bourgogne, UMR6302, CNRS , Université Bourgogne Franche-Comté , 9 avenue Alain Savary , 21000 , Dijon , France
| | - Victor Goncalves
- Institut de Chimie Moléculaire de l'Université de Bourgogne, UMR6302, CNRS , Université Bourgogne Franche-Comté , 9 avenue Alain Savary , 21000 , Dijon , France
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4
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Arvin-Berod M, Desroches-Castan A, Bonte S, Brugière S, Couté Y, Guyon L, Feige JJ, Baussanne I, Demeunynck M. Indolizine-Based Scaffolds as Efficient and Versatile Tools: Application to the Synthesis of Biotin-Tagged Antiangiogenic Drugs. ACS OMEGA 2017; 2:9221-9230. [PMID: 30023604 PMCID: PMC6044919 DOI: 10.1021/acsomega.7b01184] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/18/2017] [Accepted: 11/28/2017] [Indexed: 06/08/2023]
Abstract
We describe the design and optimization of polyfunctional scaffolds based on a fluorescent indolizine core derivatized with various orthogonal groups (amines, esters, oximes, alkynes, etc.). To show one application as tools in biology, the scaffold was used to prepare drug-biotin conjugates that were then immobilized onto avidin-agarose for affinity chromatography. More specifically, the antiangiogenic drug COB223, whose mechanism of action remained unclear, was chosen as a proof-of-concept drug. The drug-selective discrimination of proteins observed after elution of the cell lysates through the affinity columns, functionalized either with the biologically active COB223 or a structurally related inactive analogue (COB236), is a clear indication that the presence of the indolizine core does not limit drug-protein interaction and confirms the usefulness of the indolizine scaffold. Furthermore, the separation of COB223-interacting proteins from human placental extracts unveiled unanticipated protein targets belonging to the family of regulatory RNA-binding proteins, which opens the way to new hypotheses on the mode of action of this antiangiogenic drug.
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Affiliation(s)
| | | | - Simon Bonte
- Univ.
Grenoble Alpes, CNRS, DPM, 38000 Grenoble, France
| | - Sabine Brugière
- Univ.
Grenoble Alpes, CEA, Inserm, BIG-BGE, 38000 Grenoble, France
| | - Yohann Couté
- Univ.
Grenoble Alpes, CEA, Inserm, BIG-BGE, 38000 Grenoble, France
| | - Laurent Guyon
- Univ.
Grenoble Alpes, Inserm, CEA, BIG-BCI, 38000, Grenoble, France
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5
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Chatelain G, Clavé G, Saint-Pierre C, Gasparutto D, Campidelli S. Self-assembly of porphyrin–DNA hybrids into large flat nanostructures. Org Biomol Chem 2017; 15:6257-6263. [DOI: 10.1039/c7ob01267e] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Two complementary 21-mer oligonucleotide/porphyrin hybrids were synthesized and assembled into nanostructures.
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Affiliation(s)
| | - G. Clavé
- LICSEN
- NIMBE
- CEA
- CNRS
- Université Paris-Saclay
| | - C. Saint-Pierre
- Université Grenoble Alpes
- INAC-SyMMES/UMR 5819 CEA-CNRS-UGA
- CEA-Grenoble
- F-38000 Grenoble
- France
| | - D. Gasparutto
- Université Grenoble Alpes
- INAC-SyMMES/UMR 5819 CEA-CNRS-UGA
- CEA-Grenoble
- F-38000 Grenoble
- France
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6
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Renault K, Jouanno LA, Lizzul-Jurse A, Renard PY, Sabot C. Fluorogenic Behaviour of the Hetero-Diels-Alder Ligation of 5-Alkoxyoxazoles with Maleimides and their Applications. Chemistry 2016; 22:18522-18531. [DOI: 10.1002/chem.201603617] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2016] [Indexed: 12/21/2022]
Affiliation(s)
- Kévin Renault
- Normandie University; CNRS, UNIROUEN, INSA Rouen; COBRA (UMR 6014); 76000 Rouen France
| | - Laurie-Anne Jouanno
- Department of Chemistry and Biomolecular Sciences; University of Ottawa; 10 Marie Curie Ottawa Ontario K1N 6N5 Canada
| | - Antoine Lizzul-Jurse
- Normandie University; CNRS, UNIROUEN, INSA Rouen; COBRA (UMR 6014); 76000 Rouen France
| | - Pierre-Yves Renard
- Normandie University; CNRS, UNIROUEN, INSA Rouen; COBRA (UMR 6014); 76000 Rouen France
| | - Cyrille Sabot
- Normandie University; CNRS, UNIROUEN, INSA Rouen; COBRA (UMR 6014); 76000 Rouen France
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7
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Knall AC, Hollauf M, Saf R, Slugovc C. A trifunctional linker suitable for conducting three orthogonal click chemistries in one pot. Org Biomol Chem 2016; 14:10576-10580. [PMID: 27786326 DOI: 10.1039/c6ob02182d] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
The feasibility of a one pot approach for conducting mutually orthogonal thiol-Michael addition, copper catalyzed azide-alkyne and inverse electron demand Diels-Alder click chemistry on a tri-functional substrate was demonstrated.
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Affiliation(s)
- Astrid-Caroline Knall
- Institute for Chemistry and Technology of Materials, NAWI Graz, Graz University of Technology, Stremayrgasse 9, 8010 Graz, Austria.
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8
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Maruani A, Richards DA, Chudasama V. Dual modification of biomolecules. Org Biomol Chem 2016; 14:6165-78. [PMID: 27278999 DOI: 10.1039/c6ob01010e] [Citation(s) in RCA: 42] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
With the advent of novel bioorthogonal reactions and "click" chemistry, an increasing number of strategies for the single labelling of proteins and oligonucleotides have emerged. Whilst several methods exist for the site-selective introduction of a single chemical moiety, site-selective and bioorthogonal dual modification of biomolecules remains a challenge. The introduction of multiple modules enables a plethora of permutations and combinations and can generate a variety of bioconjuguates with many potential applications. From de novo approaches on oligomers to the post-translational functionalisation of proteins, this review will highlight the main strategies to dually modify biomolecules.
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Affiliation(s)
- Antoine Maruani
- Department of Chemistry, University College London, 20 Gordon Street, London, WC1H OAJ, UK.
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9
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Thompson DA, Evans EGB, Kasza T, Millhauser GL, Dawson PE. Adapter reagents for protein site specific dye labeling. Biopolymers 2016; 102:273-9. [PMID: 24599728 DOI: 10.1002/bip.22481] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2014] [Accepted: 02/22/2014] [Indexed: 12/12/2022]
Abstract
Chemoselective protein labeling remains a significant challenge in chemical biology. Although many selective labeling chemistries have been reported, the practicalities of matching the reaction with appropriately functionalized proteins and labeling reagents is often a challenge. For example, we encountered the challenge of site specifically labeling the cellular form of the murine Prion protein with a fluorescent dye. To facilitate this labeling, a protein was expressed with site specific p-acetylphenylalanine. However, the utility of this acetophenone reactive group is hampered by the severe lack of commercially available aminooxy fluorophores. Here we outline a general strategy for the efficient solid phase synthesis of adapter reagents capable of converting maleimido-labels into aminooxy or azide functional groups that can be further tuned for desired length or solubility properties. The utility of the adapter strategy is demonstrated in the context of fluorescent labeling of the murine Prion protein through an adapted aminooxy-Alexa dye.
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Affiliation(s)
- Darren A Thompson
- Department of Chemistry, The Scripps Research Institute, 10550 N. Torrey Pines Rd., La Jolla, CA, 92037
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10
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Cellular Uptake and Photo-Cytotoxicity of a Gadolinium(III)-DOTA-Naphthalimide Complex "Clicked" to a Lipidated Tat Peptide. Molecules 2016; 21:molecules21020194. [PMID: 26861271 PMCID: PMC6273236 DOI: 10.3390/molecules21020194] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2015] [Revised: 02/01/2016] [Accepted: 02/02/2016] [Indexed: 12/19/2022] Open
Abstract
A new bifunctional macrocyclic chelator featuring a conjugatable alkynyl-naphthalimide fluorophore pendant group has been prepared and its Gd(III) complex coupled to a cell-penetrating lipidated azido-Tat peptide derivative using Cu(I)-catalysed “click” chemistry. The resulting fluorescent conjugate is able to enter CAL-33 tongue squamous carcinoma cells, as revealed by confocal microscopy, producing a very modest anti-proliferative effect (IC50 = 93 µM). Due to the photo-reactivity of the naphthalimide moiety, however, the conjugate’s cytotoxicity is significantly enhanced (IC50 = 16 µM) upon brief low-power UV-A irradiation.
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11
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Mühlberg M, Hoesl MG, Kuehne C, Dernedde J, Budisa N, Hackenberger CPR. Orthogonal dual-modification of proteins for the engineering of multivalent protein scaffolds. Beilstein J Org Chem 2015; 11:784-791. [PMID: 26124880 PMCID: PMC4464295 DOI: 10.3762/bjoc.11.88] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2015] [Accepted: 05/05/2015] [Indexed: 01/12/2023] Open
Abstract
To add new tools to the repertoire of protein-based multivalent scaffold design, we have developed a novel dual-labeling strategy for proteins that combines residue-specific incorporation of unnatural amino acids with chemical oxidative aldehyde formation at the N-terminus of a protein. Our approach relies on the selective introduction of two different functional moieties in a protein by mutually orthogonal copper-catalyzed azide-alkyne cycloaddition (CuAAC) and oxime ligation. This method was applied to the conjugation of biotin and β-linked galactose residues to yield an enzymatically active thermophilic lipase, which revealed specific binding to Erythrina cristagalli lectin by SPR binding studies.
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Affiliation(s)
- Michaela Mühlberg
- Forschungsinstitut für Molekulare Pharmakologie (FMP), Robert-Roessle-Str. 10, 13125 Berlin, Germany
- Freie Universität Berlin, Institut für Chemie und Biochemie, Takustr. 3, 14195 Berlin, Germany
| | - Michael G Hoesl
- Technische Universität Berlin, AK Biokatalyse, Institut für Chemie, Müller-Breslau-Str. 10, 10623 Berlin, Germany
| | - Christian Kuehne
- Charité - Universitätsmedizin Berlin, Institut für Laboratoriumsmedizin, Klinische Chemie und Pathobiochemie, Augustenburger Platz 1, 13353 Berlin, Germany
| | - Jens Dernedde
- Charité - Universitätsmedizin Berlin, Institut für Laboratoriumsmedizin, Klinische Chemie und Pathobiochemie, Augustenburger Platz 1, 13353 Berlin, Germany
| | - Nediljko Budisa
- Technische Universität Berlin, AK Biokatalyse, Institut für Chemie, Müller-Breslau-Str. 10, 10623 Berlin, Germany
| | - Christian P R Hackenberger
- Forschungsinstitut für Molekulare Pharmakologie (FMP), Robert-Roessle-Str. 10, 13125 Berlin, Germany
- Humboldt Universität zu Berlin, Institut für Organische und Bioorganische Chemie, Institut für Chemie, Brook-Taylor-Str. 2, 12489 Berlin, Germany
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12
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Vaněk V, Pícha J, Fabre B, Buděšínský M, Lepšík M, Jiráček J. The Development of a Versatile Trifunctional Scaffold for Biological Applications. European J Org Chem 2015. [DOI: 10.1002/ejoc.201500255] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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13
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Nury C, Redeker V, Dautrey S, Romieu A, van der Rest G, Renard PY, Melki R, Chamot-Rooke J. A Novel Bio-Orthogonal Cross-Linker for Improved Protein/Protein Interaction Analysis. Anal Chem 2015; 87:1853-60. [DOI: 10.1021/ac503892c] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Affiliation(s)
- Catherine Nury
- Structural Mass Spectrometry and Proteomics Unit, Institut Pasteur, CNRS UMR 3528, Paris, France
| | - Virginie Redeker
- Neuroscience Paris-Saclay Institute, CNRS, Gif-sur-Yvette, France
| | - Sébastien Dautrey
- Normandie Université, COBRA UMR 6014 & FR 3038; UNIV Rouen; INSA Rouen; CNRS, IRCOF, 1, rue Tesnières, 76821 Mont-Saint-Aignan Cedex, France
| | - Anthony Romieu
- ICMUB, UMR CNRS 6302, Université de Bourgogne, 9, Avenue Alain Savary, 21078 Dijon, France
- Institut Universitaire de France, 103, Boulevard
Saint-Michel, 75005 Paris, France
| | | | - Pierre-Yves Renard
- Normandie Université, COBRA UMR 6014 & FR 3038; UNIV Rouen; INSA Rouen; CNRS, IRCOF, 1, rue Tesnières, 76821 Mont-Saint-Aignan Cedex, France
| | - Ronald Melki
- Neuroscience Paris-Saclay Institute, CNRS, Gif-sur-Yvette, France
| | - Julia Chamot-Rooke
- Structural Mass Spectrometry and Proteomics Unit, Institut Pasteur, CNRS UMR 3528, Paris, France
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14
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Thomas B, Fiore M, Daskhan GC, Spinelli N, Renaudet O. A multi-ligation strategy for the synthesis of heterofunctionalized glycosylated scaffolds. Chem Commun (Camb) 2015; 51:5436-9. [DOI: 10.1039/c4cc05451b] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Well-defined heterofunctionalized glycosylated scaffolds with unprecedented molecular combinations have been prepared using up to five different bioorthogonal ligations.
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15
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Clavé G, Chatelain G, Filoramo A, Gasparutto D, Saint-Pierre C, Le Cam E, Piétrement O, Guérineau V, Campidelli S. Synthesis of a multibranched porphyrin-oligonucleotide scaffold for the construction of DNA-based nano-architectures. Org Biomol Chem 2014; 12:2778-83. [PMID: 24668242 DOI: 10.1039/c4ob00202d] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
The interest in the functionalization of oligonucleotides with organic molecules has grown considerably over the last decade. In this work, we report on the synthesis and characterization of porphyrin-oligonucleotide hybrids containing one to four DNA strands (P1-P4). The hybrid P4, which inserts one porphyrin and four DNA fragments, was combined with gold nanoparticles and imaged by transmission electron microscopy.
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Affiliation(s)
- Guillaume Clavé
- CEA Saclay, IRAMIS, NIMBE, Laboratoire d'Innovation en Chimie des Surfaces et Nanosciences (LICSEN), F-91191 Gif sur Yvette, France.
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16
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Jouanno LA, Chevalier A, Sekkat N, Perzo N, Castel H, Romieu A, Lange N, Sabot C, Renard PY. Kondrat’eva Ligation: Diels–Alder-Based Irreversible Reaction for Bioconjugation. J Org Chem 2014; 79:10353-66. [DOI: 10.1021/jo501972m] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Laurie-Anne Jouanno
- Normandie Univ, COBRA, UMR 6014 & FR 3038; Univ Rouen; INSA Rouen; CNRS, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
| | - Arnaud Chevalier
- Normandie Univ, COBRA, UMR 6014 & FR 3038; Univ Rouen; INSA Rouen; CNRS, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
| | - Nawal Sekkat
- Section
des Sciences Pharmaceutiques, Université de Genève, Université de Lausanne, Quai Ernest Ansermet 30, CH-1211 Genève 4, Switzerland
| | - Nicolas Perzo
- Inserm
U982, Laboratory of Neuronal and Neuroendocrine Communication and
Differentiation (DC2N), Astrocyte and Vascular Niche, Institute of
Research and Biomedical Innovation (IRIB), PRES Normandy University, University of Rouen, 76821 Mont-Saint-Aignan Cedex, France
- North-West Cancéropole (CNO), 59008 Lille Cedex, France
| | - Hélène Castel
- Inserm
U982, Laboratory of Neuronal and Neuroendocrine Communication and
Differentiation (DC2N), Astrocyte and Vascular Niche, Institute of
Research and Biomedical Innovation (IRIB), PRES Normandy University, University of Rouen, 76821 Mont-Saint-Aignan Cedex, France
- North-West Cancéropole (CNO), 59008 Lille Cedex, France
| | - Anthony Romieu
- ICMUB,
UMR CNRS 6302, Université de Bourgogne, 9 Avenue Alain Savary, 21078 Dijon, France
- Institut Universitaire de France, 103 Boulevard Saint-Michel, 75005 Paris, France
| | - Norbert Lange
- Section
des Sciences Pharmaceutiques, Université de Genève, Université de Lausanne, Quai Ernest Ansermet 30, CH-1211 Genève 4, Switzerland
| | - Cyrille Sabot
- Normandie Univ, COBRA, UMR 6014 & FR 3038; Univ Rouen; INSA Rouen; CNRS, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
| | - Pierre-Yves Renard
- Normandie Univ, COBRA, UMR 6014 & FR 3038; Univ Rouen; INSA Rouen; CNRS, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
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17
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Chevalier A, Renard PY, Romieu A. Azo-Sulforhodamine Dyes: A Novel Class of Broad Spectrum Dark Quenchers. Org Lett 2014; 16:3946-9. [DOI: 10.1021/ol501753b] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Affiliation(s)
- Arnaud Chevalier
- Normandie Université, COBRA UMR 6014 & FR 3038, UNIV Rouen, INSA Rouen, CNRS, IRCOF, 1 Rue Tesnières, 76821 Mont-Saint-Aignan Cedex, France
| | - Pierre-Yves Renard
- Normandie Université, COBRA UMR 6014 & FR 3038, UNIV Rouen, INSA Rouen, CNRS, IRCOF, 1 Rue Tesnières, 76821 Mont-Saint-Aignan Cedex, France
| | - Anthony Romieu
- Institut
de Chimie Moléculaire de l’Université de Bourgogne,
UMR CNRS 6302, Université de Bourgogne, 9 Avenue Alain Savary, 21078 Dijon, France
- Institut Universitaire de France, 103 Boulevard Saint-Michel, 75005 Paris, France
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An amino acid-based heterofunctional cross-linking reagent. Amino Acids 2014; 46:1243-51. [PMID: 24504931 DOI: 10.1007/s00726-014-1685-3] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2013] [Accepted: 01/24/2014] [Indexed: 01/27/2023]
Abstract
We describe the synthesis and characterization of a new lysine-based heterofunctional cross-linking reagent. It carries two readily available aminooxy functionalities and an activated and protected thiol group that is capable of generating reducible disulfides, the former enable bioorthogonal modification of ketones and aldehydes by the formation of an oxime bond. The efficacy of the linker was proven by coupling two doxorubicin molecules to the functionalized amino acid core and the subsequent bioconjugation of this drug conjugate with a thiolated antibody.
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Viault G, Dautrey S, Maindron N, Hardouin J, Renard PY, Romieu A. The first "ready-to-use" benzene-based heterotrifunctional cross-linker for multiple bioconjugation. Org Biomol Chem 2013; 11:2693-705. [PMID: 23474872 DOI: 10.1039/c3ob40086g] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
The synthesis and applications of the first water-soluble benzene derivative bearing a set of three different and orthogonal bioconjugatable groups (aminooxy, azido and thiol) are described. The combined use of a 5-amino isophthalic acid scaffold and unusual acid-labile protecting groups for temporarily masking aminooxy and thiol moieties has enabled the development of a highly convergent approach towards the synthesis of such a trivalent bioconjugation platform in good yields. The potential utility of this "ready-to-use" cross-linking reagent for creating complex and fragile tri-component (bio)molecular systems was illustrated through (1) the rapid preparation of a three-colour FRET cascade with valuable spectral properties and (2) the luminescent/fluorescent labelling of peptides and peptide-oligonucleotide conjugates. Thus, such (bio)molecular assemblies were readily obtained via a three-step process or in a "one-pot" manner, both involving oxime ligation, thiol-alkylation (S(N)2 or Michael addition) and copper-catalysed azide-alkyne 1,3-dipolar cycloaddition (CuAAC) reactions.
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Affiliation(s)
- Guillaume Viault
- Normandie Univ, COBRA, UMR 6014 & FR 3038, UNIV Rouen, INSA Rouen, CNRS, 1 Rue Tesnières, 76821 Mont St Aignan Cedex, France
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Sokolova NV, Nenajdenko VG. Recent advances in the Cu(i)-catalyzed azide–alkyne cycloaddition: focus on functionally substituted azides and alkynes. RSC Adv 2013. [DOI: 10.1039/c3ra42482k] [Citation(s) in RCA: 116] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022] Open
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Fischer-Durand N, Salmain M, Vessières A, Jaouen G. A new bioorthogonal cross-linker with alkyne and hydrazide end groups for chemoselective ligation. Application to antibody labelling. Tetrahedron 2012. [DOI: 10.1016/j.tet.2012.09.062] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
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Beal DM, Jones LH. Mehrfache orthogonale Konjugationen mit Molekülgerüsten: Anwendung in der chemischen Biologie und Wirkstoff-Forschung. Angew Chem Int Ed Engl 2012. [DOI: 10.1002/ange.201200002] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Beal DM, Jones LH. Molecular Scaffolds Using Multiple Orthogonal Conjugations: Applications in Chemical Biology and Drug Discovery. Angew Chem Int Ed Engl 2012; 51:6320-6. [DOI: 10.1002/anie.201200002] [Citation(s) in RCA: 93] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/01/2012] [Indexed: 11/07/2022]
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Thomas B, Fiore M, Bossu I, Dumy P, Renaudet O. Synthesis of heteroglycoclusters by using orthogonal chemoselective ligations. Beilstein J Org Chem 2012; 8:421-7. [PMID: 22509212 PMCID: PMC3326620 DOI: 10.3762/bjoc.8.47] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2012] [Accepted: 02/29/2012] [Indexed: 12/20/2022] Open
Abstract
Synthetic heteroglycoclusters are being subjected to increasing interest due to their potential to serve as selective ligands for carbohydrate-binding proteins. In this paper, we describe an expedient strategy to prepare cyclopeptides displaying well-defined distributions and combinations of carbohydrates. By using both oxime ligation and copper(I)-catalyzed alkyne–azide cycloaddition, two series of compounds bearing binary combinations of αMan, αFuc or βLac in an overall tetravalent presentation, and either 2:2 or 3:1 relative proportions, have been prepared.
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Affiliation(s)
- Baptiste Thomas
- Département de Chimie Moléculaire, UMR-CNRS 5250 & ICMG FR 2607, Université Joseph Fourier, PB 53, 38041 Grenoble Cedex 9, France
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Beal DM, Albrow VE, Burslem G, Hitchen L, Fernandes C, Lapthorn C, Roberts LR, Selby MD, Jones LH. Click-enabled heterotrifunctional template for sequential bioconjugations. Org Biomol Chem 2012; 10:548-54. [DOI: 10.1039/c1ob06398g] [Citation(s) in RCA: 53] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Massif C, Dautrey S, Haefele A, Ziessel R, Renard PY, Romieu A. New insights into the water-solubilisation of fluorophores by post-synthetic “click” and Sonogashira reactions. Org Biomol Chem 2012; 10:4330-6. [DOI: 10.1039/c2ob25428j] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Priem T, Bouteiller C, Camporese D, Romieu A, Renard PY. Synthesis and reactivity of a bis-sultone cross-linker for peptideconjugation and [18F]-radiolabelling via unusual “double click” approach. Org Biomol Chem 2012; 10:1068-78. [DOI: 10.1039/c1ob06600e] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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