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Boto A, González CC, Hernández D, Romero-Estudillo I, Saavedra CJ. Site-selective modification of peptide backbones. Org Chem Front 2021. [DOI: 10.1039/d1qo00892g] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Exciting developments in the site-selective modification of peptide backbones are allowing an outstanding fine-tuning of peptide conformation, folding ability, and physico-chemical and biological properties.
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Affiliation(s)
- Alicia Boto
- Instituto de Productos Naturales y Agrobiología del CSIC, Avda. Astrofísico Francisco Sánchez 3, 38206-La Laguna, Tenerife, Spain
| | - Concepción C. González
- Instituto de Productos Naturales y Agrobiología del CSIC, Avda. Astrofísico Francisco Sánchez 3, 38206-La Laguna, Tenerife, Spain
| | - Dácil Hernández
- Instituto de Productos Naturales y Agrobiología del CSIC, Avda. Astrofísico Francisco Sánchez 3, 38206-La Laguna, Tenerife, Spain
| | - Iván Romero-Estudillo
- Centro de Investigaciones Químicas-IICBA, Universidad Autónoma del Estado de Morelos. Av. Universidad 1001, Cuernavaca, Morelos 62209, Mexico
- Catedrático CONACYT-CIQ-UAEM, Mexico
| | - Carlos J. Saavedra
- Instituto de Productos Naturales y Agrobiología del CSIC, Avda. Astrofísico Francisco Sánchez 3, 38206-La Laguna, Tenerife, Spain
- Programa Agustín de Betancourt, Universidad de la Laguna, 38200 Tenerife, Spain
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2
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Modern tools for the chemical ligation and synthesis of modified peptides and proteins. Future Med Chem 2016; 8:2287-2304. [DOI: 10.4155/fmc-2016-0175] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022] Open
Abstract
The ability to improve nature's capacity by introducing modification of biological interest in proteins and peptides (P&P) is one of the modern challenges in synthetic chemistry. Due to the unfavorable pharmacokinetic properties, many native P&P are of little use as therapeutic agents. Today, few methods for the preparation of modified proteins are available. Initially introduced to realize the ligation between two standard peptidic sequences, and hence to afford native proteins, the modern chemical methodologies, in other words native chemical ligation, expressed ligation, Staudinger ligation, auxiliary mediated ligation, aldehyde capture, etc., can be virtually utilized to ligate a variety of peptidomimetic partners, allowing a systematic access to modified, unnatural large P&P.
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3
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Mondal B, Roy B, Kazmaier U. Stereoselective Peptide Modifications via β-C(sp3)-H Arylations. J Org Chem 2016; 81:11646-11655. [DOI: 10.1021/acs.joc.6b01963] [Citation(s) in RCA: 53] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Biplab Mondal
- Organische
Chemie, Universität des Saarlandes, Campus, Geb. C4.2, D-66123 Saarbruecken, Germany
- Department
of Chemistry, University of Kalyani, Kalyani, Nadia, WB 741235, India
| | - Brindaban Roy
- Department
of Chemistry, University of Kalyani, Kalyani, Nadia, WB 741235, India
| | - Uli Kazmaier
- Organische
Chemie, Universität des Saarlandes, Campus, Geb. C4.2, D-66123 Saarbruecken, Germany
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4
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Junk L, Kazmaier U. Synthesis of indoles and tryptophan derivatives via photoinduced nitrene C–H insertion. Org Biomol Chem 2016; 14:2916-23. [DOI: 10.1039/c5ob02563j] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Functionalized indoles and tryptophans can be obtained from stannylated alkenes and o-iodoanilines via Stille coupling.
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Affiliation(s)
- Lukas Junk
- Institute of Organic Chemistry
- Saarland University
- 66041 Saarbrücken
- Germany
| | - Uli Kazmaier
- Institute of Organic Chemistry
- Saarland University
- 66041 Saarbrücken
- Germany
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5
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Kazmaier U. Non-stabilized enolates – versatile nucleophiles in transition metal-catalysed allylic alkylations. Org Chem Front 2016. [DOI: 10.1039/c6qo00192k] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
This review covers new developments in the transition metal-catalyzed allylic alkylations of non-stabilized enolates, preferentially generated from ketone, esters or amides.
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Affiliation(s)
- Uli Kazmaier
- Institute of Organic Chemistry
- Saarland University
- 66041 Saarbrücken
- Germany
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6
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Gorges J, Kazmaier U. BEt3-Initiated Thiol-Ene Click Reactions as a Versatile Tool To Modify Sensitive Substrates. European J Org Chem 2015. [DOI: 10.1002/ejoc.201500915] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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Romero-Estudillo I, Saavedra C, Boto A, Álvarez E. Site-selective modification of peptides: From “customizable units” to novelα-aryl andα-alkyl glycine derivatives, and components of branched peptides. Biopolymers 2015; 104:650-62. [DOI: 10.1002/bip.22642] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2015] [Revised: 03/04/2015] [Accepted: 03/07/2015] [Indexed: 12/15/2022]
Affiliation(s)
- Iván Romero-Estudillo
- Instituto de Productos Naturales y Agrobiología CSIC; Avda. Astrofísico Fco. Sánchez 3, 38206 La Laguna Tenerife Spain
| | - Carlos Saavedra
- Instituto de Productos Naturales y Agrobiología CSIC; Avda. Astrofísico Fco. Sánchez 3, 38206 La Laguna Tenerife Spain
| | - Alicia Boto
- Instituto de Productos Naturales y Agrobiología CSIC; Avda. Astrofísico Fco. Sánchez 3, 38206 La Laguna Tenerife Spain
| | - Eleuterio Álvarez
- Instituto de Investigaciones Químicas CSIC-USE; Avda. Américo Vespucio 49, Isla de la Cartuja, 41092 Sevilla Spain
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8
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Kiefer A, Gawas D, Kazmaier U. Palladium-Catalyzed Allylic Alkylation Reactions of Glycolates as a Tool for the Synthesis of Functionalized α-Hydroxy Esters. European J Org Chem 2015. [DOI: 10.1002/ejoc.201500755] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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9
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Romero-Estudillo I, Boto A. Domino Process Achieves Site-Selective Peptide Modification with High Optical Purity. Applications to Chain Diversification and Peptide Ligation. J Org Chem 2015; 80:9379-91. [DOI: 10.1021/acs.joc.5b00932] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Ivan Romero-Estudillo
- Instituto de Productos Naturales y Agrobiología del CSIC, Avda. Astrofísico Francisco Sánchez 3, 38206-La Laguna, Tenerife, Spain
| | - Alicia Boto
- Instituto de Productos Naturales y Agrobiología del CSIC, Avda. Astrofísico Francisco Sánchez 3, 38206-La Laguna, Tenerife, Spain
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Huwig K, Schultz K, Kazmaier U. Regio- und stereoselektive Modifizierung chiraler α-Aminoketone durch Palladium-katalysierte allylische Alkylierung. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201502975] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Huwig K, Schultz K, Kazmaier U. Regio- and Stereoselective Modification of Chiral α-Amino Ketones by Pd-Catalyzed Allylic Alkylation. Angew Chem Int Ed Engl 2015; 54:9120-3. [DOI: 10.1002/anie.201502975] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2015] [Indexed: 11/11/2022]
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12
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Karmann L, Schultz K, Herrmann J, Müller R, Kazmaier U. Totalsynthese und biologische Evaluierung von Miuraenamiden. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201411212] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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13
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Karmann L, Schultz K, Herrmann J, Müller R, Kazmaier U. Total syntheses and biological evaluation of miuraenamides. Angew Chem Int Ed Engl 2015; 54:4502-7. [PMID: 25688545 DOI: 10.1002/anie.201411212] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2014] [Indexed: 11/09/2022]
Abstract
The miuraenamides, relatively simple representatives of a class of cyclodepsipeptides with high antitumor activity, can be easily and flexibly obtained by the concept of peptide modification. A reaction sequence consisting of an aldol reaction, oxidation, and methylation of the glycine subunit of the cyclodepsipeptides allows the incorporation of the unusual α,β-unsaturated dehydroamino acid in one of the last steps of the synthesis.
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Affiliation(s)
- Lisa Karmann
- Institute for Organic Chemistry, Saarland University, P.O. box 151150, 66041 Saarbrücken (Germany) http://www.uni-saarland.de/lehrstuhl/kazmaier
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15
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Rong B, Yang Q, Liu Y, Xu H, Hu Y, Cheng X, Zhao B. Pd-catalyzed asymmetric α-allylic alkylation of thioamides. Tetrahedron Lett 2015. [DOI: 10.1016/j.tetlet.2014.12.031] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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16
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Bayer A, Kazmaier U. Selective Peptide Modifications via Ruthenium-Catalyzed Allylic Alkylations. J Org Chem 2014; 79:8491-7. [DOI: 10.1021/jo501731y] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Anton Bayer
- Universität des Saarlandes, Institut für Organische Chemie, Campus, Geb. C4.2, D-66123 Saarbrücken, Germany
| | - Uli Kazmaier
- Universität des Saarlandes, Institut für Organische Chemie, Campus, Geb. C4.2, D-66123 Saarbrücken, Germany
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Bayer A, Kazmaier U. [(p-Cymene)RuCl2 ]2 : an efficient catalyst for highly regioselective allylic alkylations of chelated amino acid ester enolates. Chemistry 2014; 20:10484-91. [PMID: 25044060 DOI: 10.1002/chem.201402825] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2014] [Revised: 05/05/2014] [Indexed: 11/11/2022]
Abstract
Chelated amino acid ester enolates are excellent nucleophiles for ruthenium-catalyzed allylic alkylations. Although [Cp*Ru(MeCN)3 ]PF6 was found to be the most reactive catalyst investigated, with the resulting allyl complexes reacting at temperatures as low as -78 °C, unfortunately the process took place with only moderate regio- and diastereoselectivity. In contrast, [(p-cymene)RuCl2 ]2 allowed allylations to be performed with a high degree of regioretention. Secondary allyl carboxylates with a terminal double bond were found to be the most reactive substrates, giving rise to the branched amino acids with perfect regioretention and chirality transfer. In this case, no isomerization of the Ru-allyl complex formed in situ was observed, in contrast to the analogues palladium complexes. This isomerization-free protocol can also be used for the synthesis of (Z)-configured γ,δ-unsaturated amino acid derivatives, starting from (Z)-allylic substrates. Here, the more reactive phosphates were found to be superior to the carboxylates, providing the required amino acids in almost quantitative yield with perfect regio- and stereoretention. Therefore, the Ru-catalyzed allylation reactions are well positioned to overcome the drawbacks of Pd-catalyzed processes.
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Affiliation(s)
- Anton Bayer
- Institut für Organische Chemie, Universität des Saarlandes, Im Stadtwald, Geb. C4.2, 66041 Saarbrücken (Germany), Fax: (+49) 681-3022409
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18
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Firdous S, Kazmaier U. Syntheses of Functionalized Allylamines via Lithiated Intermediates. European J Org Chem 2014. [DOI: 10.1002/ejoc.201400017] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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19
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Thies S, Kazmaier U. Synthesis of α-Amino-γ-lactams through Pd-Catalzed Intramolecular Allylic Alkylation of Sarcosine Allyl Amides. European J Org Chem 2014. [DOI: 10.1002/ejoc.201301659] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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20
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Rong B, Ding L, Yu H, Yang Q, Liu X, Xu D, Li G, Zhao B. Pd-catalyzed allylic alkylation of thioamides. Tetrahedron Lett 2013. [DOI: 10.1016/j.tetlet.2013.09.081] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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21
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Romero-Estudillo I, Boto A. Creating diversity by site-selective peptide modification: a customizable unit affords amino acids with high optical purity. Org Lett 2013; 15:5778-81. [PMID: 24171384 DOI: 10.1021/ol402800a] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Abstract
The development of peptide libraries by site-selective modification of a few parent peptides would save valuable time and materials in discovery processes, but still is a difficult synthetic challenge. Herein natural hydroxyproline is introduced as a "convertible" unit for the production of a variety of optically pure amino acids, including expensive N-alkyl amino acids, and to achieve the mild, efficient, and site-selective modification of peptides.
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Affiliation(s)
- Ivan Romero-Estudillo
- Instituto de Productos Naturales y Agrobiología del CSIC , Avda. Astrofísico Fco. Sánchez, 3, 38206-La Laguna, Tenerife, Spain
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22
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Karmann L, Kazmaier U. Thiol-Ene Click Reactions - Versatile Tools for the Modification of Unsaturated Amino Acids and Peptides. European J Org Chem 2013. [DOI: 10.1002/ejoc.201300672] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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23
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Gorges J, Ullrich A, Kazmaier U. Straightforward Approach to Ferrocenyl Amino Acids and Peptides by Allylic Alkylation. European J Org Chem 2013. [DOI: 10.1002/ejoc.201300346] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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24
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Datta S, Bayer A, Kazmaier U. Highly stereoselective modifications of peptides via Pd-catalyzed allylic alkylation of internal peptide amide enolates. Org Biomol Chem 2013; 10:8268-75. [PMID: 22986919 DOI: 10.1039/c2ob26351c] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Pd-catalyzed allylations are excellent tools for stereoselective peptide modifications, showing several advantages compared to normal alkylations. Reactions of internal peptide amide enolates with Pd-allyl complexes proceed not only with high yields of up to 86%, they show also high regio- and diastereoselectivities (88-99%), giving rise to the trans-configured products. Therefore, this protocol is a powerful synthetic tool for the synthesis of natural product and drug molecules.
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Affiliation(s)
- Swarup Datta
- Institute for Organic Chemistry, Saarland University, Saarbruecken, Germany.
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25
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Saavedra CJ, Boto A, Hernández R. “Customizable” Units in Di- and Tripeptides: Selective Conversion into Substituted Dehydroamino Acids. Org Lett 2012; 14:3788-91. [DOI: 10.1021/ol301676z] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Affiliation(s)
- Carlos J. Saavedra
- Instituto de Productos Naturales y Agrobiología CSIC, Avda. Astrofísico Fco. Sánchez 3, 38206 La Laguna, Tenerife, Spain
| | - Alicia Boto
- Instituto de Productos Naturales y Agrobiología CSIC, Avda. Astrofísico Fco. Sánchez 3, 38206 La Laguna, Tenerife, Spain
| | - Rosendo Hernández
- Instituto de Productos Naturales y Agrobiología CSIC, Avda. Astrofísico Fco. Sánchez 3, 38206 La Laguna, Tenerife, Spain
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26
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Saavedra CJ, Boto A, Hernández R. Synthesis of α,γ-Peptide Hybrids by Selective Conversion of Glutamic Acid Units. Org Lett 2012; 14:3542-5. [DOI: 10.1021/ol301552c] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Carlos J. Saavedra
- Instituto de Productos Naturales y Agrobiología CSIC, Avda. Astrofísico Fco. Sánchez 3, 38206-La Laguna, Tenerife, Spain
| | - Alicia Boto
- Instituto de Productos Naturales y Agrobiología CSIC, Avda. Astrofísico Fco. Sánchez 3, 38206-La Laguna, Tenerife, Spain
| | - Rosendo Hernández
- Instituto de Productos Naturales y Agrobiología CSIC, Avda. Astrofísico Fco. Sánchez 3, 38206-La Laguna, Tenerife, Spain
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Kotha S, Goyal née Bansal D, Thota N, Srinivas V. Synthesis of Modified Phenylalanine Peptides by Cross Enyne Metathesis and a Diels-Alder Reaction as Key Steps. European J Org Chem 2012. [DOI: 10.1002/ejoc.201101744] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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28
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Zhao LM, Zhang SQ, Jin HS, Wan LJ, Dou F. Zinc-mediated highly α-regioselective prenylation of imines with prenyl bromide. Org Lett 2012; 14:886-9. [PMID: 22263586 DOI: 10.1021/ol203410m] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A highly α-regioselective prenylation of imines has been successfully developed. The efficiency of this approach is confirmed by a wide range of imines including N- and C-aryl aldimines, N-alkyl aldimines, C-alkyl aldimines, and N- and C-aryl ketimines. The approach uses prenyl bromide as the prenyl source and inexpensive and convenient zinc as the mediator as well as environmentally benign 1,3-dimethyl-2-imidazolidinone (DMI) as the solvent.
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Affiliation(s)
- Li-Ming Zhao
- School of Chemistry and Chemical Engineering, and Jiangsu Key Laboratory of Green Synthetic Chemistry for Functional Materials, Xuzhou Normal University, Xuzhou 221116, Jiangsu, China.
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Bukovec C, Kazmaier U. Stannylated allyl carbonates as versatile building blocks for the diversity oriented synthesis of allylic amines and amides. Org Biomol Chem 2011; 9:2743-50. [PMID: 21380466 DOI: 10.1039/c0ob00945h] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Stannylated allylic carbonates are suitable substrates for Pd-catalyzed allylic aminations. In DMF and with [allylPdCl](2) as catalyst the stannylated allyl amines formed can be directly coupled with electrophiles according to the Stille protocol, giving rise to highly functionalized building blocks in excellent yields.
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Affiliation(s)
- Christian Bukovec
- Institut für Organische Chemie, Universität des Saarlandes, D-66123, Saarbrücken, Germany
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