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Target amplification-free detection of urinary microRNA for diabetic nephropathy diagnosis with electrocatalytic reaction. Anal Bioanal Chem 2022; 414:5695-5707. [PMID: 35476120 DOI: 10.1007/s00216-022-04072-w] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2021] [Revised: 03/12/2022] [Accepted: 04/06/2022] [Indexed: 12/31/2022]
Abstract
Diabetic nephropathy (DN) is a serious diabetic complication, usually developed from type II diabetes mellitus (T2DM) and known as type II DN (T2DN). New emerging biomarkers for T2DN are microRNAs (miRNAs) which have been studied for the noninvasive early-stage detection of the disease. In this work, a nucleic acid amplification-free miRNA-124 sensor based on target-induced strand displacement on magnetic beads, and by using methylene blue-loaded silica particles as a label was developed. Measurement methods can be either visual observation, spectrophotometry, or electrochemistry. After incubation and separation of the magnetic particles, a blue-violet solution (564 nm) appeared, depending on the concentration of miRNA displaced. For electrochemical detection, methylene blue on the silica served as a redox mediator for the coupled reaction with ferricyanide in the solution phase. At the electrode surface, ferricyanide was re-reduced to ferrocyanide, and was thus available for further reaction with methylene blue, forming an amplification cycle. After optimization, the total assay time was 60 min, and limits of detection were 1 pM, 6 fM, and 0.65 fM, by the naked eye, spectrophotometry and electrochemistry, respectively. The miRNAs in 42 suspected urine samples from patients suffering from either diabetic nephropathy, diabetes mellitus, or chronic kidney disease were validated by comparing with the droplet digital polymerase chain reaction (ddPCR).
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Song S, Kim YJ, Kang HL, Yoon S, Hong DK, Kim WH, Shin IS, Seong WK, Lee KN. Sensitivity Improvement in Electrochemical Immunoassays Using Antibody Immobilized Magnetic Nanoparticles with a Clean ITO Working Electrode. BIOCHIP JOURNAL 2020. [DOI: 10.1007/s13206-020-4309-x] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
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Wongkaew N, Simsek M, Griesche C, Baeumner AJ. Functional Nanomaterials and Nanostructures Enhancing Electrochemical Biosensors and Lab-on-a-Chip Performances: Recent Progress, Applications, and Future Perspective. Chem Rev 2018; 119:120-194. [DOI: 10.1021/acs.chemrev.8b00172] [Citation(s) in RCA: 303] [Impact Index Per Article: 50.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Nongnoot Wongkaew
- Institute of Analytical Chemistry, Chemo- and Biosensors, University of Regensburg, 93053 Regensburg, Germany
| | - Marcel Simsek
- Institute of Analytical Chemistry, Chemo- and Biosensors, University of Regensburg, 93053 Regensburg, Germany
| | - Christian Griesche
- Institute of Analytical Chemistry, Chemo- and Biosensors, University of Regensburg, 93053 Regensburg, Germany
| | - Antje J. Baeumner
- Institute of Analytical Chemistry, Chemo- and Biosensors, University of Regensburg, 93053 Regensburg, Germany
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Ngoensawat U, Rijiravanich P, Surareungchai W, Somasundrum M. Electrochemical Immunoassay forSalmonellaTyphimurium Based on an Immuno-magnetic Redox Label. ELECTROANAL 2017. [DOI: 10.1002/elan.201700568] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Umphan Ngoensawat
- School of Bioresources and Technology; King Mongkut's University of Technology Thonburi, Bang Khun Thian; Bangkok 10150 Thailand
| | - Patsamon Rijiravanich
- Biochemical Engineering and Pilot Plant Research and Development Unit, National Center for Genetic Engineering and Biotechnology; National Science and Technology Development Agency at King Mongkut's University of Technology Thonburi, Bang Khun Thian; Bangkok 10150 Thailand
| | - Werasak Surareungchai
- School of Bioresources and Technology; King Mongkut's University of Technology Thonburi, Bang Khun Thian; Bangkok 10150 Thailand
- Nanoscience & Nanotechnology Graduate Program; King Mongkut's University of Technology Thonburi, Bang Khun Thian; Bangkok 10150 Thailand
| | - Mithran Somasundrum
- Biochemical Engineering and Pilot Plant Research and Development Unit, National Center for Genetic Engineering and Biotechnology; National Science and Technology Development Agency at King Mongkut's University of Technology Thonburi, Bang Khun Thian; Bangkok 10150 Thailand
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Cheeveewattanagul N, Rijiravanich P, Surareungchai W, Somasundrum M. Loading of silicon nanoparticle labels with redox mediators for detection of multiple DNA targets within a single voltammetric sweep. J Electroanal Chem (Lausanne) 2016. [DOI: 10.1016/j.jelechem.2016.05.002] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
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Conde JP, Madaboosi N, Soares RRG, Fernandes JTS, Novo P, Moulas G, Chu V. Lab-on-chip systems for integrated bioanalyses. Essays Biochem 2016; 60:121-31. [PMID: 27365042 PMCID: PMC4986467 DOI: 10.1042/ebc20150013] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Biomolecular detection systems based on microfluidics are often called lab-on-chip systems. To fully benefit from the miniaturization resulting from microfluidics, one aims to develop 'from sample-to-answer' analytical systems, in which the input is a raw or minimally processed biological, food/feed or environmental sample and the output is a quantitative or qualitative assessment of one or more analytes of interest. In general, such systems will require the integration of several steps or operations to perform their function. This review will discuss these stages of operation, including fluidic handling, which assures that the desired fluid arrives at a specific location at the right time and under the appropriate flow conditions; molecular recognition, which allows the capture of specific analytes at precise locations on the chip; transduction of the molecular recognition event into a measurable signal; sample preparation upstream from analyte capture; and signal amplification procedures to increase sensitivity. Seamless integration of the different stages is required to achieve a point-of-care/point-of-use lab-on-chip device that allows analyte detection at the relevant sensitivity ranges, with a competitive analysis time and cost.
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Affiliation(s)
- João Pedro Conde
- Instituto de Engenharia de Sistemas E Computadores-Microsistemas e Nanotecnologias (INESC MN) and IN-Institute of Nanoscience and Nanotechnology, Rua Alves Redol, 9, 1000-029 Lisbon, Portugal Department of Bioengineering, Instituto Superior Técnico, University of Lisbon, 1049-001, Lisbon, Portugal
| | - Narayanan Madaboosi
- Instituto de Engenharia de Sistemas E Computadores-Microsistemas e Nanotecnologias (INESC MN) and IN-Institute of Nanoscience and Nanotechnology, Rua Alves Redol, 9, 1000-029 Lisbon, Portugal
| | - Ruben R G Soares
- Instituto de Engenharia de Sistemas E Computadores-Microsistemas e Nanotecnologias (INESC MN) and IN-Institute of Nanoscience and Nanotechnology, Rua Alves Redol, 9, 1000-029 Lisbon, Portugal
| | - João Tiago S Fernandes
- Instituto de Engenharia de Sistemas E Computadores-Microsistemas e Nanotecnologias (INESC MN) and IN-Institute of Nanoscience and Nanotechnology, Rua Alves Redol, 9, 1000-029 Lisbon, Portugal
| | - Pedro Novo
- Instituto de Engenharia de Sistemas E Computadores-Microsistemas e Nanotecnologias (INESC MN) and IN-Institute of Nanoscience and Nanotechnology, Rua Alves Redol, 9, 1000-029 Lisbon, Portugal
| | - Geraud Moulas
- Instituto de Engenharia de Sistemas E Computadores-Microsistemas e Nanotecnologias (INESC MN) and IN-Institute of Nanoscience and Nanotechnology, Rua Alves Redol, 9, 1000-029 Lisbon, Portugal
| | - Virginia Chu
- Instituto de Engenharia de Sistemas E Computadores-Microsistemas e Nanotecnologias (INESC MN) and IN-Institute of Nanoscience and Nanotechnology, Rua Alves Redol, 9, 1000-029 Lisbon, Portugal
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Ngoensawat U, Rijiravanich P, Somasundrum M, Surareungchai W. Highly sensitive electrochemical detection of DNA hybridisation by coupling the chemical reduction of a redox label to the electrode reaction of a solution phase mediator. Analyst 2014; 139:5740-6. [PMID: 25262699 DOI: 10.1039/c4an01011f] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We have described a highly sensitive method for detecting DNA hybridisation using a redox-labeled stem loop probe. The redox labels were poly(styrene-co-acrylic) (PSA) spheres of 454 nm diameter, modified by methylene blue (MB) deposited alternatively with poly(sodium 4-styrene sulphonate) (PSS) in a layer-by-layer process. Each PSA sphere carried approx. 3.7 × 10(5) molecules of MB, as determined optically. DIG-tagged stem loop probes were immobilised on screen printed electrodes bearing anti-DIG antibodies. Binding with the target enabled straightening of the stem loop, which made attachment to the MB-coated PSA spheres possible. For measuring the current from the direct reduction of MB by differential pulse voltammetry, a 30 mer DNA target common to 70 strains of Escherichia coli was calibrated across the range 1.0 fM to 100 pM (gradient = 3.2 × 10(-8) A (log fM)(-1), r(2) = 0.95, n = 60), with an LOD of ∼58 fM. By using Fe(CN)6(3-/4-) as a solution phase mediator for the MB reduction, we were able to lower the LOD to ∼39 aM (gradient = 5.95 × 10(-8) A (log aM)(-1), r(2) = 0.96, n = 30), which corresponds to the detection of 0.76 ag (∼50 molecules) in the 2 μL analyte sample. We hypothesise that the lowering of the LOD was due to the fact that not all the MB labels were able to contact the electrode surface.
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Affiliation(s)
- Umphan Ngoensawat
- School of Bioresources and Technology, King Mongkut's University of Technology Thonburi, Bang Khun Thian, Bangkok 10150, Thailand.
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Miao J, Wang X, Lu L, Zhu P, Mao C, Zhao H, Song Y, Shen J. Electrochemical immunosensor based on hyperbranched structure for carcinoembryonic antigen detection. Biosens Bioelectron 2014; 58:9-16. [DOI: 10.1016/j.bios.2014.02.024] [Citation(s) in RCA: 46] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2013] [Revised: 01/19/2014] [Accepted: 02/10/2014] [Indexed: 12/13/2022]
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9
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Chen X, Tian R, Zhang Q, Yao C. Target-induced electronic switch for ultrasensitive detection of Pb2+ based on three dimensionally ordered macroporous Au–Pd bimetallic electrode. Biosens Bioelectron 2014; 53:90-8. [DOI: 10.1016/j.bios.2013.09.028] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2013] [Revised: 09/11/2013] [Accepted: 09/12/2013] [Indexed: 12/16/2022]
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Wang X, Zhou M, Zhu Y, Miao J, Mao C, Shen J. Preparation of a novel immunosensor for tumor biomarker detection based on ATRP technique. J Mater Chem B 2013; 1:2132-2138. [DOI: 10.1039/c3tb00003f] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
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Akanda MR, Choe YL, Yang H. “Outer-Sphere to Inner-Sphere” Redox Cycling for Ultrasensitive Immunosensors. Anal Chem 2011; 84:1049-55. [DOI: 10.1021/ac202638y] [Citation(s) in RCA: 70] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Affiliation(s)
- Md. Rajibul Akanda
- Department
of Chemistry and Chemistry Institute for
Functional Materials, Pusan National University, Busan 609-735, Korea
| | - Yu-Lim Choe
- Department
of Chemistry and Chemistry Institute for
Functional Materials, Pusan National University, Busan 609-735, Korea
| | - Haesik Yang
- Department
of Chemistry and Chemistry Institute for
Functional Materials, Pusan National University, Busan 609-735, Korea
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