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Li Y, He X, Wang P, Yuan B, Pan Y, Hu X, Lu L, Wu A, Li J. A D-Y Shaped Neuropeptide Y Mimetic Peptide-Dye Self-Assembly with Maximal Emission Beyond 1300 nm and Glioma Mitochondrial Activity Modulation. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2023:e2308621. [PMID: 38109130 DOI: 10.1002/smll.202308621] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Indexed: 12/19/2023]
Abstract
Neuropeptide Y (NPY), as one of the most abundant neuropeptides known, is widely distributed in the central and peripheral nervous system. However, most of the reported NPY-mimetic peptides are hard to cross the blood-brain barrier, target glioma mitochondria, and achieve self-assembly nanostructure in situ. Here, based on the α-helix structure of the novel chiral NPY-mimetic peptides D/L NPY(14), a Y-shaped peptide is designed with the sequences that can be recognized by enterokinase and achieved nanofibers conversion in glioma cell mitochondria. Coupling the Y-shaped NPY-mimetic peptide with the NIR-II fluorophore IR1048, a red-shifting of the fluorescence spectrum beyond 1300 nm is achieved through self-assembly. After the self-assembly in glioma mitochondria, the formed nanofibers can promote intracellular mitochondrial ROS production and extend the NIR-II fluorescence imaging time to at least 7 days in vivo. This work for the first time endows the self-assembly of α-helical-based chiral NPY-mimetic peptides, providing a novel strategy for glioma subcellular regulation enhanced antitumor treatment guided by NIR-II fluorescence imaging.
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Affiliation(s)
- Yanying Li
- Cixi Institute of Biomedical Engineering,Ningbo Key Laboratory of Biomedical Imaging Probe Materials and Technology, CAS Key Laboratory of Magnetic Materials and Devices, Zhejiang Engineering Research Center for Biomedical Materials, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, P. R. China
- Department of Medical Cell Biology, Science for Life Laboratory, Uppsala University, Uppsala, SE-75124, Sweden
| | - Xuelu He
- Cixi Institute of Biomedical Engineering,Ningbo Key Laboratory of Biomedical Imaging Probe Materials and Technology, CAS Key Laboratory of Magnetic Materials and Devices, Zhejiang Engineering Research Center for Biomedical Materials, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, P. R. China
| | - Pin Wang
- Cixi Institute of Biomedical Engineering,Ningbo Key Laboratory of Biomedical Imaging Probe Materials and Technology, CAS Key Laboratory of Magnetic Materials and Devices, Zhejiang Engineering Research Center for Biomedical Materials, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, P. R. China
- University of Chinese Academy of Sciences, Beijing, 100049, P. R. China
| | - Bo Yuan
- Cixi Institute of Biomedical Engineering,Ningbo Key Laboratory of Biomedical Imaging Probe Materials and Technology, CAS Key Laboratory of Magnetic Materials and Devices, Zhejiang Engineering Research Center for Biomedical Materials, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, P. R. China
| | - Yuanbo Pan
- Cixi Institute of Biomedical Engineering,Ningbo Key Laboratory of Biomedical Imaging Probe Materials and Technology, CAS Key Laboratory of Magnetic Materials and Devices, Zhejiang Engineering Research Center for Biomedical Materials, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, P. R. China
| | - Xueyin Hu
- Cixi Institute of Biomedical Engineering,Ningbo Key Laboratory of Biomedical Imaging Probe Materials and Technology, CAS Key Laboratory of Magnetic Materials and Devices, Zhejiang Engineering Research Center for Biomedical Materials, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, P. R. China
| | - Liheng Lu
- Cixi Institute of Biomedical Engineering,Ningbo Key Laboratory of Biomedical Imaging Probe Materials and Technology, CAS Key Laboratory of Magnetic Materials and Devices, Zhejiang Engineering Research Center for Biomedical Materials, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, P. R. China
| | - Aiguo Wu
- Cixi Institute of Biomedical Engineering,Ningbo Key Laboratory of Biomedical Imaging Probe Materials and Technology, CAS Key Laboratory of Magnetic Materials and Devices, Zhejiang Engineering Research Center for Biomedical Materials, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, P. R. China
| | - Juan Li
- Cixi Institute of Biomedical Engineering,Ningbo Key Laboratory of Biomedical Imaging Probe Materials and Technology, CAS Key Laboratory of Magnetic Materials and Devices, Zhejiang Engineering Research Center for Biomedical Materials, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, 315201, P. R. China
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2
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Abstract
Nanoscale optical labeling is an advanced bioimaging tool. It is mostly based on fluorescence (FL) phenomena and enables the visualization of single biocells, bacteria, viruses, and biological tissues, providing monitoring of functional biosystems in vitro and in vivo, and the imaging-guided transportation of drug molecules. There is a variety of FL biolabels such as organic molecular dyes, genetically encoded fluorescent proteins (green fluorescent protein and homologs), semiconductor quantum dots, carbon dots, plasmonic metal gold-based nanostructures and more. In this review, a new generation of FL biolabels based on the recently found biophotonic effects of visible FL are described. This intrinsic FL phenomenon is observed in any peptide/protein materials folded into β-sheet secondary structures, irrespective of their composition, complexity, and origin. The FL effect has been observed both in natural amyloid fibrils, associated with neurodegenerative diseases (Alzheimer’s, Parkinson’s, and more), and diverse synthetic peptide/protein structures subjected to thermally induced biological refolding helix-like→β-sheet. This approach allowed us to develop a new generation of FL peptide/protein bionanodots radiating multicolor, tunable, visible FL, covering the entire visible spectrum in the range of 400–700 nm. Newly developed biocompatible nanoscale biomarkers are considered as a promising tool for emerging precise biomedicine and advanced medical nanotechnologies (high-resolution bioimaging, light diagnostics, therapy, optogenetics, and health monitoring).
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3
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Dresser L, Hunter P, Yendybayeva F, Hargreaves AL, Howard JAL, Evans GJO, Leake MC, Quinn SD. Amyloid-β oligomerization monitored by single-molecule stepwise photobleaching. Methods 2020; 193:80-95. [PMID: 32544592 PMCID: PMC8336786 DOI: 10.1016/j.ymeth.2020.06.007] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2020] [Revised: 06/02/2020] [Accepted: 06/10/2020] [Indexed: 01/19/2023] Open
Abstract
Method enables investigation of amyloid-β oligomer stoichiometry without requiring extrinsic fluorescent probes. Uses single-molecule stepwise photobleaching in vitro. Unveils heterogeneity within populations of oligomers. Assays oligomer-induced dysregulation of intracellular Ca2+ homeostasis in living cells.
A major hallmark of Alzheimer’s disease is the misfolding and aggregation of the amyloid- β peptide (Aβ). While early research pointed towards large fibrillar- and plaque-like aggregates as being the most toxic species, recent evidence now implicates small soluble Aβ oligomers as being orders of magnitude more harmful. Techniques capable of characterizing oligomer stoichiometry and assembly are thus critical for a deeper understanding of the earliest stages of neurodegeneration and for rationally testing next-generation oligomer inhibitors. While the fluorescence response of extrinsic fluorescent probes such as Thioflavin-T have become workhorse tools for characterizing large Aβ aggregates in solution, it is widely accepted that these methods suffer from many important drawbacks, including an insensitivity to oligomeric species. Here, we integrate several biophysics techniques to gain new insight into oligomer formation at the single-molecule level. We showcase single-molecule stepwise photobleaching of fluorescent dye molecules as a powerful method to bypass many of the traditional limitations, and provide a step-by-step guide to implementing the technique in vitro. By collecting fluorescence emission from single Aβ(1–42) peptides labelled at the N-terminal position with HiLyte Fluor 555 via wide-field total internal reflection fluorescence (TIRF) imaging, we demonstrate how to characterize the number of peptides per single immobile oligomer and reveal heterogeneity within sample populations. Importantly, fluorescence emerging from Aβ oligomers cannot be easily investigated using diffraction-limited optical microscopy tools. To assay oligomer activity, we also demonstrate the implementation of another biophysical method involving the ratiometric imaging of Fura-2-AM loaded cells which quantifies the rate of oligomer-induced dysregulation of intracellular Ca2+ homeostasis. We anticipate that the integrated single-molecule biophysics approaches highlighted here will develop further and in principle may be extended to the investigation of other protein aggregation systems under controlled experimental conditions.
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Affiliation(s)
- Lara Dresser
- Department of Physics, University of York, Heslington YO10 5DD, UK
| | - Patrick Hunter
- Department of Physics, University of York, Heslington YO10 5DD, UK
| | | | - Alex L Hargreaves
- Department of Physics, University of York, Heslington YO10 5DD, UK; Department of Biology, University of York, Heslington YO10 5DD, UK
| | - Jamieson A L Howard
- Department of Physics, University of York, Heslington YO10 5DD, UK; Department of Biology, University of York, Heslington YO10 5DD, UK
| | - Gareth J O Evans
- Department of Biology, University of York, Heslington YO10 5DD, UK; York Biomedical Research Institute, University of York, Heslington YO10 5DD, UK
| | - Mark C Leake
- Department of Physics, University of York, Heslington YO10 5DD, UK; Department of Biology, University of York, Heslington YO10 5DD, UK; York Biomedical Research Institute, University of York, Heslington YO10 5DD, UK
| | - Steven D Quinn
- Department of Physics, University of York, Heslington YO10 5DD, UK; York Biomedical Research Institute, University of York, Heslington YO10 5DD, UK.
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4
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Gyasi YI, Pang YP, Li XR, Gu JX, Cheng XJ, Liu J, Xu T, Liu Y. Biological applications of near infrared fluorescence dye probes in monitoring Alzheimer’s disease. Eur J Med Chem 2020; 187:111982. [DOI: 10.1016/j.ejmech.2019.111982] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2019] [Revised: 12/03/2019] [Accepted: 12/16/2019] [Indexed: 01/10/2023]
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5
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Aliyan A, Cook NP, Martí AA. Interrogating Amyloid Aggregates using Fluorescent Probes. Chem Rev 2019; 119:11819-11856. [DOI: 10.1021/acs.chemrev.9b00404] [Citation(s) in RCA: 113] [Impact Index Per Article: 22.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Amir Aliyan
- Pasargad Institute for Advanced Innovative Solutions (PIAIS), Tehran, Iran 1991633361
- Khatam University, Tehran, Iran 1991633356
| | - Nathan P. Cook
- Department of Chemistry, Williams College, Williamstown, Massachusetts 01267, United States
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6
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de Freitas MS, Rezaei Araghi R, Brandenburg E, Leiterer J, Emmerling F, Folmert K, Gerling-Driessen UIM, Bardiaux B, Böttcher C, Pagel K, Diehl A, Berlepsch HV, Oschkinat H, Koksch B. The protofilament architecture of a de novo designed coiled coil-based amyloidogenic peptide. J Struct Biol 2018; 203:263-272. [PMID: 29857134 DOI: 10.1016/j.jsb.2018.05.009] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2018] [Revised: 05/25/2018] [Accepted: 05/28/2018] [Indexed: 01/15/2023]
Abstract
Amyloid fibrils are polymers formed by proteins under specific conditions and in many cases they are related to pathogenesis, such as Parkinson's and Alzheimer's diseases. Their hallmark is the presence of a β-sheet structure. High resolution structural data on these systems as well as information gathered from multiple complementary analytical techniques is needed, from both a fundamental and a pharmaceutical perspective. Here, a previously reported de novo designed, pH-switchable coiled coil-based peptide that undergoes structural transitions resulting in fibril formation under physiological conditions has been exhaustively characterized by transmission electron microscopy (TEM), cryo-TEM, atomic force microscopy (AFM), wide-angle X-ray scattering (WAXS) and solid-state NMR (ssNMR). Overall, a unique 2-dimensional carpet-like assembly composed of large coexisiting ribbon-like, tubular and funnel-like structures with a clearly resolved protofilament substructure is observed. Whereas electron microscopy and scattering data point somewhat more to a hairpin model of β-fibrils, ssNMR data obtained from samples with selectively labelled peptides are in agreement with both, hairpin structures and linear arrangements.
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Affiliation(s)
- Mônica Santos de Freitas
- Leibniz-Institut für Molekulare Pharmakologie, Department NMR-Supported Structural Biology, Robert-Rössle-Strasse 10, 13125 Berlin, Germany; Freie Universität Berlin, Department of Chemistry and Biochemistry, Takustrasse 3, 14195 Berlin, Germany; Universidade Federal do Rio de Janeiro, Instituto de Bioquímica Médica Leopoldo de Meis, Centro Nacional de Biologia Estrutural e Bioimagem, Av. Carlos Chagas Filho 373, Rio de Janeiro, Brazil
| | - Raheleh Rezaei Araghi
- Freie Universität Berlin, Department of Chemistry and Biochemistry, Takustrasse 3, 14195 Berlin, Germany
| | - Enrico Brandenburg
- Freie Universität Berlin, Department of Chemistry and Biochemistry, Takustrasse 3, 14195 Berlin, Germany
| | - Jork Leiterer
- BAM Federal Institute for Materials Research and Testing, Richard-Willstätter-Str. 11, 12489 Berlin, Germany
| | - Franziska Emmerling
- BAM Federal Institute for Materials Research and Testing, Richard-Willstätter-Str. 11, 12489 Berlin, Germany
| | - Kristin Folmert
- Freie Universität Berlin, Department of Chemistry and Biochemistry, Takustrasse 3, 14195 Berlin, Germany
| | - Ulla I M Gerling-Driessen
- Freie Universität Berlin, Department of Chemistry and Biochemistry, Takustrasse 3, 14195 Berlin, Germany
| | - Benjamin Bardiaux
- Institut Pasteur, Unité de Bioinformatique Structurale, CNRS UMR 3528, 75015 Paris, France
| | - Christoph Böttcher
- Freie Universität Berlin, Research Center for Electron Microscopy, Fabeckstrasse 36a, 14195 Berlin, Germany
| | - Kevin Pagel
- Freie Universität Berlin, Department of Chemistry and Biochemistry, Takustrasse 3, 14195 Berlin, Germany
| | - Anne Diehl
- Leibniz-Institut für Molekulare Pharmakologie, Department NMR-Supported Structural Biology, Robert-Rössle-Strasse 10, 13125 Berlin, Germany
| | - Hans V Berlepsch
- Freie Universität Berlin, Research Center for Electron Microscopy, Fabeckstrasse 36a, 14195 Berlin, Germany
| | - Hartmut Oschkinat
- Leibniz-Institut für Molekulare Pharmakologie, Department NMR-Supported Structural Biology, Robert-Rössle-Strasse 10, 13125 Berlin, Germany; Freie Universität Berlin, Department of Chemistry and Biochemistry, Takustrasse 3, 14195 Berlin, Germany.
| | - Beate Koksch
- Freie Universität Berlin, Department of Chemistry and Biochemistry, Takustrasse 3, 14195 Berlin, Germany.
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7
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Cao KJ, Yang J. Translational opportunities for amyloid-targeting fluorophores. Chem Commun (Camb) 2018; 54:9107-9118. [DOI: 10.1039/c8cc03619e] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Amyloid-targeting fluorophores have become increasingly useful as clinical tools to aid in the early-stage detection and diagnoses of amyloid-associated neurodegenerative disorders.
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Affiliation(s)
- Kevin J. Cao
- Department of Chemistry and Biochemistry, University of California
- La Jolla
- USA
| | - Jerry Yang
- Department of Chemistry and Biochemistry, University of California
- La Jolla
- USA
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8
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Hu J, Zhu H, Li Y, Wang X, Ma R, Guo Q, Xia A. Enhanced fluorescence of [[5′-(4-hydroxyphenyl)[2,2′-bithiophen]-5-yl]methylene]-propanedinitrile (NIAD-4): solvation induced micro-viscosity enhancement. Phys Chem Chem Phys 2016; 18:18750-7. [DOI: 10.1039/c6cp00881j] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The solvation induced micro-viscosity enhancement effects on the fluorescence of a novel amyloid fibril marker (NIAD-4) were investigated in different alcoholic and aprotic solvents.
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Affiliation(s)
- Jiangpu Hu
- Beijing National Laboratory for Molecular Sciences (BNLMS)
- Institute of Chemistry
- Chinese Academy of Sciences
- Beijing 100190
- P. R. China
| | - Huaning Zhu
- Beijing National Laboratory for Molecular Sciences (BNLMS)
- Institute of Chemistry
- Chinese Academy of Sciences
- Beijing 100190
- P. R. China
| | - Yang Li
- Beijing National Laboratory for Molecular Sciences (BNLMS)
- Institute of Chemistry
- Chinese Academy of Sciences
- Beijing 100190
- P. R. China
| | - Xian Wang
- Beijing National Laboratory for Molecular Sciences (BNLMS)
- Institute of Chemistry
- Chinese Academy of Sciences
- Beijing 100190
- P. R. China
| | - Renjun Ma
- Beijing National Laboratory for Molecular Sciences (BNLMS)
- Institute of Chemistry
- Chinese Academy of Sciences
- Beijing 100190
- P. R. China
| | - Qianjin Guo
- Beijing National Laboratory for Molecular Sciences (BNLMS)
- Institute of Chemistry
- Chinese Academy of Sciences
- Beijing 100190
- P. R. China
| | - Andong Xia
- Beijing National Laboratory for Molecular Sciences (BNLMS)
- Institute of Chemistry
- Chinese Academy of Sciences
- Beijing 100190
- P. R. China
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9
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Bae S, Lim E, Hwang D, Huh H, Kim SK. Torsion-dependent fluorescence switching of amyloid-binding dye NIAD-4. Chem Phys Lett 2015. [DOI: 10.1016/j.cplett.2015.05.010] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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10
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Cheng Y, Zhu B, Deng Y, Zhang Z. In Vivo Detection of Cerebral Amyloid Fibrils with Smart Dicynomethylene-4H-Pyran-Based Fluorescence Probe. Anal Chem 2015; 87:4781-7. [PMID: 25875134 DOI: 10.1021/acs.analchem.5b00017] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Affiliation(s)
- Yan Cheng
- Key Laboratory
of Drug Targeting
and Drug Delivery Systems, West China School of Pharmacy, Sichuan University, Chengdu 610041, China
| | - Biyue Zhu
- Key Laboratory
of Drug Targeting
and Drug Delivery Systems, West China School of Pharmacy, Sichuan University, Chengdu 610041, China
| | - Yue Deng
- Key Laboratory
of Drug Targeting
and Drug Delivery Systems, West China School of Pharmacy, Sichuan University, Chengdu 610041, China
| | - Zhirong Zhang
- Key Laboratory
of Drug Targeting
and Drug Delivery Systems, West China School of Pharmacy, Sichuan University, Chengdu 610041, China
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11
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Tong H, Lou K, Wang W. Near-infrared fluorescent probes for imaging of amyloid plaques in Alzheimer׳s disease. Acta Pharm Sin B 2015; 5:25-33. [PMID: 26579421 PMCID: PMC4629210 DOI: 10.1016/j.apsb.2014.12.006] [Citation(s) in RCA: 94] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2014] [Revised: 12/08/2014] [Accepted: 12/11/2014] [Indexed: 12/25/2022] Open
Abstract
One of the early pathological hallmarks of Alzheimer׳s disease (AD) is the deposition of amyloid-β (Aβ) plaques in the brain. There has been a tremendous interest in the development of Aβ plaques imaging probes for early diagnosis of AD in the past decades. Optical imaging, particularly near-infrared fluorescence (NIRF) imaging, has emerged as a safe, low cost, real-time, and widely available technique, providing an attractive approach for in vivo detection of Aβ plaques among many different imaging techniques. In this review, we provide a brief overview of the state-of-the-art development of NIRF Aβ probes and their in vitro and in vivo applications with special focus on design strategies and optical, binding, and brain-kinetic properties.
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Key Words
- AD, Alzheimer’s disease
- APP, amyloid peptide precursor
- Ach, acetylcholine
- Alzheimer׳s disease
- Amyloid-β plagues
- Aβ, amyloid-β
- BAP, BODIPY-based Ab imaging probe
- BBB, blood-brain barrier
- Blood-brain barrier
- Cy, cyanine dyes
- Fluorescence probe
- ICG, indocyanine green dyes
- MRI, magnetic resonance imaging
- NIR, near-infrared
- NIRF, near-infrared fluorescence
- Near-infrared fluorescence
- Optical imaging
- PET, positron emission tomography
- ROS, reactive oxygen species
- SPECT, single photon emission computed tomography
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12
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Bäcklund FG, Solin N. Development and application of methodology for rapid screening of potential amyloid probes. ACS COMBINATORIAL SCIENCE 2014; 16:721-9. [PMID: 25383488 DOI: 10.1021/co5001212] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Herein, we demonstrate that it is possible to rapidly screen hydrophobic fluorescent aromatic molecules with regards to their properties as amyloid probes. By grinding the hydrophobic molecule with the amyloidogenic protein insulin, we obtained a water-soluble composite material. When this material is dissolved and exposed to conditions promoting amyloid formation, the protein aggregates into amyloid fibrils incorporating the hydrophobic molecule. As a result, changes in the fluorescence spectra of the hydrophobic molecule can be correlated to the formation of amyloid fibrils, and the suitability of the hydrophobic molecular skeleton as an amyloid probe can thus be assessed. As a result, we discovered two new amyloid probes, of which one is the well-known laser dye DCM. The grinding method can also be used for rapid preparation of novel composite materials between dyes and proteins, which can be used in materials science applications such as organic electronics and photonics.
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Affiliation(s)
- Fredrik G. Bäcklund
- Department of Physics, Chemistry,
and Biology; Biomolecular and Organic Electronics, Linköping University, 581 83 Linköping, Sweden
| | - Niclas Solin
- Department of Physics, Chemistry,
and Biology; Biomolecular and Organic Electronics, Linköping University, 581 83 Linköping, Sweden
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13
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Quinn SD, Dalgarno PA, Cameron RT, Hedley GJ, Hacker C, Lucocq JM, Baillie GS, Samuel IDW, Penedo JC. Real-time probing of β-amyloid self-assembly and inhibition using fluorescence self-quenching between neighbouring dyes. ACTA ACUST UNITED AC 2014; 10:34-44. [DOI: 10.1039/c3mb70272c] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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14
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Brandenburg E, Berlepsch HV, Leiterer J, Emmerling F, Koksch B. Formation of α-helical nanofibers by mixing β-structured and α-helical coiled coil peptides. Biomacromolecules 2012; 13:3542-51. [PMID: 22946440 DOI: 10.1021/bm300882d] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Abstract
The helical coiled coil is a well-studied folding motif that can be used for the design of nanometer-sized bioinspired fibrous structures with potential applications as functional materials. A two-component system of coiled coil based model peptides is investigated, which forms, under acidic conditions, uniform, hundreds of nanometers long, and ~2.6 nm thick trimeric α-helical fibers. In the absence of the other component and under the same solvent conditions, one model peptide forms β-sheet-rich amyloid fibrils and the other forms stable trimeric α-helical coiled coils, respectively. These observations reveal that the complementary interactions driving helical folding are much stronger here than those promoting the intermolecular β-sheet formation. The results of this study are important in the context of amyloid inhibition but also open up new avenues for the design of novel fibrous peptidic materials.
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Affiliation(s)
- Enrico Brandenburg
- Department of Chemistry and Biochemistry, Freie Universität Berlin, Takustrasse 3, 14195 Berlin, Germany
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15
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Cao K, Farahi M, Dakanali M, Chang WM, Sigurdson CJ, Theodorakis EA, Yang J. Aminonaphthalene 2-cyanoacrylate (ANCA) probes fluorescently discriminate between amyloid-β and prion plaques in brain. J Am Chem Soc 2012; 134:17338-41. [PMID: 22866977 DOI: 10.1021/ja3063698] [Citation(s) in RCA: 61] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
A major challenge for diagnosing and monitoring the progression of amyloid-based diseases is the capability to distinguish between amyloid deposits that are associated with related, but distinctly different, diseases. Here, we demonstrate that aminonaphthalenyl 2-cyanoacrylate-based probes can fluorescently discriminate between different types of amyloid deposits in brain. The discriminating capability of these molecular rotors is due to the stabilization of the ground versus excited states of these probes as a function of the polarity of their microenvironment (i.e., within the binding pocket on the amyloid). This property makes it possible, for the first time, to estimate the inherent static relative permittivity (ε(0)) of the binding pocket of each amyloid within tissue. The capability to selectively follow the deposition of specific amyloids in tissue may provide important information for therapeutic development that is not readily accessible from currently available technology.
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Affiliation(s)
- Kevin Cao
- Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, California 92093-0358, USA
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