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Ghosh U, Kumar V, Singh G, Kanti Chakraborty T. Conformation Based in silico Studies of Cyclic Tetrapeptides with βγ Fused Turns as Thrombin Inhibitors. ChemistrySelect 2023. [DOI: 10.1002/slct.202204761] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/17/2023]
Affiliation(s)
- Uttam Ghosh
- Department of Organic Chemistry Indian Institute of Science Bengaluru 560012 India
| | - Vikash Kumar
- CSIR-Central Drug Research Institute Lucknow 226031 India
| | - Gajendra Singh
- CSIR-Central Drug Research Institute Lucknow 226031 India
- School of Life Sciences Central University of Rajasthan Bandar Sindri Ajmer 305817 Rajasthan India
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2
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Mitra S, Mondal AH, Mukhopadhyay K. Mitigating the toxicity of palmitoylated analogue of α-melanocyte stimulating hormone(11-13) by conjugation with gold nanoparticle: characterisation and antibacterial efficacy against methicillin sensitive and resistant Staphylococccus aureus. World J Microbiol Biotechnol 2022; 38:186. [PMID: 35972627 PMCID: PMC9379238 DOI: 10.1007/s11274-022-03365-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2022] [Accepted: 07/25/2022] [Indexed: 11/24/2022]
Abstract
In an attempt to develop potent and non-toxic antimicrobial agent, the palmitoylated analogue of α-melanocyte stimulating hormone(11-13), Pal-α-MSH(11-13) was conjugated with gold nanoparticles (GNPs) for the first time and the efficacy of derived complex was investigated against two strains of Staphylococccus aureus. The GNPs were synthesized using tri-sodium citrate as reductant and Pal-α-MSH(11-13) was conjugated thereafter. The particles were characterised by UV-vis spectroscopy, transmission electron microscopy, dynamic light scattering, fourier transform infrared spectroscopy etc. Conjugation occurred via electrostatic interaction between anionic GNPs and cationic Pal-α-MSH(11-13). The zeta potential of GNP-Pal-α-MSH(11-13) was - 26.91, indicating its stability. The antibacterial activity was determined by minimal inhibitory concentration (MIC) and killing kinetics assay, whereas, inhibition of biofilm formation was studied by determining the biofilm biomass by crystal violet dye binding method, viability of biofilm-embedded cells by counting CFUs and metabolic activity by MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide) assay. The toxicity was analysed by hemolysis assay against murine RBCs and cytotoxicity against 3T3 fibroblasts. The MIC was 18 µM for GNP-Pal-α-MSH(11-13) and 12 µM for Pal-α-MSH(11-13). The killing kinetics and biofilm inhibition studies indicated the comparable efficacy of peptide before and after nano-conjugation. Importantly, the conjugation resulted in diminished toxicity, as evidenced by 0.29 ± 0.03% hemolysis and 100% viable fibroblasts at 72 µM compared to the Pal-α-MSH(11-13), showing 74.99 ± 1.59% hemolysis and 59.39 ± 1.06% viable fibroblasts. The nano-fabrication drastically reduced the peptide toxicity without compromising its antibacterial efficacy. The anionicity of the conjugate may be responsible for non-toxicity that makes them suitable for pharmaceutical applications.
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Affiliation(s)
- Sayani Mitra
- Antimicrobial Research Laboratory, School of Environmental Sciences, Jawaharlal Nehru University, 110067, New Delhi, India
| | - Aftab Hossain Mondal
- Antimicrobial Research Laboratory, School of Environmental Sciences, Jawaharlal Nehru University, 110067, New Delhi, India.,Department of Microbiology, Faculty of Allied Health Sciences, Shree Guru Gobind Singh Tricentenary University, Gurugram-122505, Haryana, India
| | - Kasturi Mukhopadhyay
- Antimicrobial Research Laboratory, School of Environmental Sciences, Jawaharlal Nehru University, 110067, New Delhi, India.
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3
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Zhao X, Tang H, Jiang X. Deploying Gold Nanomaterials in Combating Multi-Drug-Resistant Bacteria. ACS NANO 2022; 16:10066-10087. [PMID: 35776694 DOI: 10.1021/acsnano.2c02269] [Citation(s) in RCA: 49] [Impact Index Per Article: 24.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Antibiotic resistance has become a serious threat to human health due to the overuse of antibiotics. Different antibiotics are being developed to treat resistant bacteria, but the development cycle of antibiotics is hard to keep up with the high incidence of antibiotic resistance. Recent advances in antimicrobial nanomaterials have made nanotechnology a powerful solution to this dilemma. Among these nanomaterials, gold nanomaterials have excellent antibacterial efficacy and biosafety, making them alternatives to antibiotics. This review presents strategies that use gold nanomaterials to combat drug-resistant bacteria. We focus on the influence of physicochemical factors such as surface chemistry, size, and shape of gold nanomaterials on their antimicrobial properties and describe the antimicrobial applications of gold nanomaterials in medical devices. Finally, the existing challenges and future directions are discussed.
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Affiliation(s)
- Xiaohui Zhao
- Guangdong Provincial Key Laboratory of Advanced Biomaterials, Shenzhen Key Laboratory of Smart Healthcare Engineering, Department of Biomedical Engineering, Southern University of Science and Technology, Guangdong 518055, P.R. China
| | - Hao Tang
- Guangdong Provincial Key Laboratory of Advanced Biomaterials, Shenzhen Key Laboratory of Smart Healthcare Engineering, Department of Biomedical Engineering, Southern University of Science and Technology, Guangdong 518055, P.R. China
| | - Xingyu Jiang
- Guangdong Provincial Key Laboratory of Advanced Biomaterials, Shenzhen Key Laboratory of Smart Healthcare Engineering, Department of Biomedical Engineering, Southern University of Science and Technology, Guangdong 518055, P.R. China
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4
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Abstract
Being able to effectively target RNA with potent ligands will open up a large number of potential therapeutic options. The knowledge on how to achieve this is ever expanding but an important question that remains open is what chemical matter is suitable to achieve this goal. The high flexibility of an RNA as well as its more limited chemical diversity and featureless binding sites can be difficult to target selectively but can be addressed by well-designed cyclic peptides. In this review we will provide an overview of reported cyclic peptide ligands for therapeutically relevant RNA targets and discuss the methods used to discover them. We will also provide critical insights into the properties required for potent and selective interaction and suggestions on how to assess these parameters. The use of cyclic peptides to target RNA is still in its infancy but the lessons learned from past examples can be adopted for the development of novel potent and selective ligands.
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Affiliation(s)
- Sunit Pal
- Chemical Genomics Centre of the Max Planck Society, Max Planck Institute of Molecular Physiology, Dortmund, Germany
| | - Peter 't Hart
- Chemical Genomics Centre of the Max Planck Society, Max Planck Institute of Molecular Physiology, Dortmund, Germany
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5
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Wu B, Shao Y, Zhao W, Zheng Y, Wang Y, Sun D. Dual functions of epigallocatechin gallate surface-modified Au nanorods@selenium composites for near-infrared-II light-responsive synergistic antibacterial therapy. J Biomater Appl 2022; 36:1812-1825. [PMID: 35232312 DOI: 10.1177/08853282211048570] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Diseases caused by bacterial infections pose ever-increasing threats to human health, making it important to explore alternative antibacterial strategies. Herein, epigallocatechin gallate (EGCG) surface-modified Au nanorods@selenium composites (ASE NPs) were developed for synergistic NIR-II light-responsive antibacterial therapy. In vitro antibacterial experiments demonstrated the improved antibacterial effect of ASE NPs against Staphylococcus aureus (S. aureus) compared with EGCG alone. In addition, in vivo studies demonstrated that ASE NPs cured skin wound infections and sepsis in mice caused by S. aureus. Au nanorods with excellent photothermal conversion realized synergistic photothermal therapy (PTT) in the NIR-II biowindow with an improved penetration depth at a low power density. More importantly, toxicity analysis showed that the composites had no toxic effects on major organs. Thus, the EGCG surface-modified Au nanorods@selenium composites with an NIR-II light-responsive synergistic activity hold great promise for the effective treatment of drug-resistant bacterial infections.
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Affiliation(s)
- Bingbing Wu
- School of life sciences, 12486Anhui Agricultural University, Hefei, Anhui, P.R. China
| | - Yuyan Shao
- School of life sciences, 12486Anhui Agricultural University, Hefei, Anhui, P.R. China
| | - Wei Zhao
- School of life sciences, 12486Anhui Agricultural University, Hefei, Anhui, P.R. China
| | - Yunfang Zheng
- School of life sciences, 12486Anhui Agricultural University, Hefei, Anhui, P.R. China
| | - Yunsheng Wang
- School of life sciences, 12486Anhui Agricultural University, Hefei, Anhui, P.R. China
| | - Dongdong Sun
- School of life sciences, 12486Anhui Agricultural University, Hefei, Anhui, P.R. China
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6
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Ghosh U, Basu M, Pal S, Meena S, Datta D, Ampapathi RS, Kundu TK, Singh G, Chakraborty TK. Design, Synthesis and Conformational Studies of Cyclic Tetrapeptides having βγ Fused Turns as HDAC Inhibitors. ChemistrySelect 2021. [DOI: 10.1002/slct.202102417] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Uttam Ghosh
- Department of Organic Chemistry Indian Institute of Science Bengaluru 560012 India
| | - Moumita Basu
- Transcription and Disease Laboratory Molecular Biology & Genetics Unit Jawaharlal Nehru Centre for Advanced Scientific Research Bengaluru 560064 India
| | - Sudip Pal
- CSIR-Central Drug Research Institute Sector 10, Jankipuram Extension Sitapur Road Lucknow 226031 India
| | - Sanjeev Meena
- CSIR-Central Drug Research Institute Sector 10, Jankipuram Extension Sitapur Road Lucknow 226031 India
| | - Dipak Datta
- CSIR-Central Drug Research Institute Sector 10, Jankipuram Extension Sitapur Road Lucknow 226031 India
| | - Ravi Sankar Ampapathi
- CSIR-Central Drug Research Institute Sector 10, Jankipuram Extension Sitapur Road Lucknow 226031 India
| | - Tapas K Kundu
- Transcription and Disease Laboratory Molecular Biology & Genetics Unit Jawaharlal Nehru Centre for Advanced Scientific Research Bengaluru 560064 India
- CSIR-Central Drug Research Institute Sector 10, Jankipuram Extension Sitapur Road Lucknow 226031 India
| | - Gajendra Singh
- CSIR-Central Drug Research Institute Sector 10, Jankipuram Extension Sitapur Road Lucknow 226031 India
- National Centre for Biological Sciences Tata Institute of Fundamental Research Bellary Road Bengaluru 560065 India
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7
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Chen J, Dai T, Yu J, Dai X, Chen R, Wu J, Li N, Fan L, Mao Z, Sheng G, Li L. Integration of antimicrobial peptides and gold nanorods for bimodal antibacterial applications. Biomater Sci 2021; 8:4447-4457. [PMID: 32691787 DOI: 10.1039/d0bm00782j] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
The misuse and abuse of antibiotics have given rise to a severe problem of the drug resistance of bacteria. Solving this problem has been a vitally important task in the modern medical arena. In this work, an antimicrobial peptide (AMP), BF2b, and gold nanorods (AuNRs) were used to develop a specific drug delivery system for killing methicillin-resistant Staphylococcus aureus (MRSA). On the one hand, BF2b has unique anti-bacterial performance and has a lower tendency than traditional antibiotics to engender the drug resistance of bacteria. On the other hand, AuNRs have diverse distinct properties, such as photo-thermal conversion, which can be employed for photo-thermal sterilization. We aimed to integrate the anti-bacterial activity of BF2b and the photo-thermal sterilization of AuNRs to kill drug-resistant bacteria. Fourier-transform infrared spectroscopy, microBCA and zeta potential measurements were utilized to characterize the product, AuNR@PEG/BF2b. Transmittance electron microscopy, UV-vis spectroscopy and photothermal conversion measurement were conducted to verify the stability and photothermal conversion capacity of AuNR@PEG/BF2b. Cell viability and hemolysis assay were carried out to test the biocompatibility of AuNR@PEG/BF2b. Finally, the in vitro and in vivo experiments were performed to demonstrate the excellent bactericidal activity of AuNR@PEG/BF2b.
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Affiliation(s)
- Jin Chen
- Department of Infectious Disease, Shulan (Hangzhou) Hospital Affiliated to Zhejiang Shuren University, Shulan International Medical College, Hangzhou 310022, China and MOE Key Laboratory of Macromolecular Synthesis and Functionalization, Department of Polymer Science and Engineering, Zhejiang University, Hangzhou 310027, China.
| | - Tingting Dai
- Department of Infectious Disease, Shulan (Hangzhou) Hospital Affiliated to Zhejiang Shuren University, Shulan International Medical College, Hangzhou 310022, China and State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, National Clinical Research Center for Infectious Diseases, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, The First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou 310022, China.
| | - Jiawei Yu
- Department of Infectious Disease, Shulan (Hangzhou) Hospital Affiliated to Zhejiang Shuren University, Shulan International Medical College, Hangzhou 310022, China
| | - Xiahong Dai
- Department of Infectious Disease, Shulan (Hangzhou) Hospital Affiliated to Zhejiang Shuren University, Shulan International Medical College, Hangzhou 310022, China
| | - Richai Chen
- Department of Infectious Disease, Shulan (Hangzhou) Hospital Affiliated to Zhejiang Shuren University, Shulan International Medical College, Hangzhou 310022, China
| | - Jiajun Wu
- Department of Infectious Disease, Shulan (Hangzhou) Hospital Affiliated to Zhejiang Shuren University, Shulan International Medical College, Hangzhou 310022, China
| | - Nan Li
- Department of Infectious Disease, Shulan (Hangzhou) Hospital Affiliated to Zhejiang Shuren University, Shulan International Medical College, Hangzhou 310022, China
| | - Linxiao Fan
- Department of Infectious Disease, Shulan (Hangzhou) Hospital Affiliated to Zhejiang Shuren University, Shulan International Medical College, Hangzhou 310022, China and State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, National Clinical Research Center for Infectious Diseases, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, The First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou 310022, China.
| | - Zhengwei Mao
- MOE Key Laboratory of Macromolecular Synthesis and Functionalization, Department of Polymer Science and Engineering, Zhejiang University, Hangzhou 310027, China.
| | - Guoping Sheng
- Department of Infectious Disease, Shulan (Hangzhou) Hospital Affiliated to Zhejiang Shuren University, Shulan International Medical College, Hangzhou 310022, China and State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, National Clinical Research Center for Infectious Diseases, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, The First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou 310022, China.
| | - Lanjuan Li
- Department of Infectious Disease, Shulan (Hangzhou) Hospital Affiliated to Zhejiang Shuren University, Shulan International Medical College, Hangzhou 310022, China and State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, National Clinical Research Center for Infectious Diseases, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, The First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou 310022, China.
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8
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Ryu M, Park J, Yeom JH, Joo M, Lee K. Rediscovery of antimicrobial peptides as therapeutic agents. J Microbiol 2021; 59:113-123. [PMID: 33527313 DOI: 10.1007/s12275-021-0649-z] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2020] [Accepted: 12/23/2020] [Indexed: 02/07/2023]
Abstract
In recent years, the occurrence of antibiotic-resistant pathogens is increasing rapidly. There is growing concern as the development of antibiotics is slower than the increase in the resistance of pathogenic bacteria. Antimicrobial peptides (AMPs) are promising alternatives to antibiotics. Despite their name, which implies their antimicrobial activity, AMPs have recently been rediscovered as compounds having antifungal, antiviral, anticancer, antioxidant, and insecticidal effects. Moreover, many AMPs are relatively safe from toxic side effects and the generation of resistant microorganisms due to their target specificity and complexity of the mechanisms underlying their action. In this review, we summarize the history, classification, and mechanisms of action of AMPs, and provide descriptions of AMPs undergoing clinical trials. We also discuss the obstacles associated with the development of AMPs as therapeutic agents and recent strategies formulated to circumvent these obstacles.
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Affiliation(s)
- Minkyung Ryu
- Department of Life Science, Chung-Ang University, Seoul, 06974, Republic of Korea
| | - Jaeyeong Park
- Department of Life Science, Chung-Ang University, Seoul, 06974, Republic of Korea
| | - Ji-Hyun Yeom
- Department of Life Science, Chung-Ang University, Seoul, 06974, Republic of Korea.
| | - Minju Joo
- Department of Life Science, Chung-Ang University, Seoul, 06974, Republic of Korea.
| | - Kangseok Lee
- Department of Life Science, Chung-Ang University, Seoul, 06974, Republic of Korea.
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9
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Ghosh U, Soni I, Kaul G, Trivedi P, Chaturvedi V, Chopra S, Kanti Chakraborty T. Synthesis and Biological Studies of Dodecameric Cationic Antimicrobial Peptides Containing Tetrahydrofuran Amino Acids. Chembiochem 2020; 21:2518-2526. [PMID: 32297461 DOI: 10.1002/cbic.202000163] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2020] [Revised: 04/13/2020] [Indexed: 11/05/2022]
Abstract
We report here a concise route to synthesize various stereoisomers of tetrahydrofuran amino acids (TAAs) and the synthesis of TAA-containing linear cationic dodecapeptides. Some of these linear peptides show slightly better antimicrobial activities than their tetra- and octameric congeners, but no activity against Mycobacterium tuberculosis, for which octapeptides exhibited by far the best results; this implies that antibacterial activity is dependent on the length of these linear peptides. All the dodecapeptides described here were found to be toxic in nature against Vero cells. The study helps to delineate the optimal length of this series of linear peptides and select potential leads in the development of novel cationic peptide-based antibiotics.
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Affiliation(s)
- Uttam Ghosh
- Department of Organic Chemistry, Indian Institution of Science, Bengaluru, 560012, Karnataka, India
| | - Isha Soni
- Division of Microbiology, CSIR-Central Drug Research Institute, Lucknow, 226031, Uttar Pradesh, India
| | - Grace Kaul
- Division of Microbiology, CSIR-Central Drug Research Institute, Lucknow, 226031, Uttar Pradesh, India
| | - Priyanka Trivedi
- Division of Biochemistry, CSIR-Central Drug Research Institute, Lucknow, 226031, Uttar Pradesh, India
| | - Vinita Chaturvedi
- Division of Biochemistry, CSIR-Central Drug Research Institute, Lucknow, 226031, Uttar Pradesh, India
| | - Sidharth Chopra
- Division of Microbiology, CSIR-Central Drug Research Institute, Lucknow, 226031, Uttar Pradesh, India
| | - Tushar Kanti Chakraborty
- Department of Organic Chemistry, Indian Institution of Science, Bengaluru, 560012, Karnataka, India
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10
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Casciaro B, Ghirga F, Quaglio D, Mangoni ML. Inorganic Gold and Polymeric Poly(Lactide-co-glycolide) Nanoparticles as Novel Strategies to Ameliorate the Biological Properties of Antimicrobial Peptides. Curr Protein Pept Sci 2020; 21:429-438. [DOI: 10.2174/1389203720666191203101947] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2019] [Revised: 09/22/2019] [Accepted: 10/22/2019] [Indexed: 01/01/2023]
Abstract
Cationic antimicrobial peptides (AMPs) are an interesting class of gene-encoded molecules
endowed with a broad-spectrum of anti-infective activity and immunomodulatory properties. They
represent promising candidates for the development of new antibiotics, mainly due to their membraneperturbing
mechanism of action that very rarely induces microbial resistance. However, bringing
AMPs into the clinical field is hampered by some intrinsic limitations, encompassing low peptide
bioavailability at the target site and high peptide susceptibility to proteolytic degradation. In this regard,
nanotechnologies represent an innovative strategy to circumvent these issues. According to the
literature, a large variety of nanoparticulate systems have been employed for drug-delivery, bioimaging,
biosensors or nanoantibiotics. The possibility of conjugating different types of molecules, including
AMPs, to these systems, allows the production of nanoformulations able to enhance the biological
profile of the compound while reducing its cytotoxicity and prolonging its residence time. In this minireview,
inorganic gold nanoparticles (NPs) and biodegradable polymeric NPs made of poly(lactide-coglycolide)
are described with particular emphasis on examples of the conjugation of AMPs to them, to
highlight the great potential of such nanoformulations as alternative antimicrobials.
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Affiliation(s)
- Bruno Casciaro
- Center for Life Nano Science, Istituto Italiano di Tecnologia, Rome, Italy
| | - Francesca Ghirga
- Center for Life Nano Science, Istituto Italiano di Tecnologia, Rome, Italy
| | - Deborah Quaglio
- Department of Chemistry and Technology of Drugs, Sapienza University of Rome, Rome, Italy
| | - Maria Luisa Mangoni
- Laboratory affiliated to Pasteur Italia-Fondazione Cenci Bolognetti, Department of Biochemical Sciences, Sapienza University of Rome, Rome, Italy
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11
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Chennaiah A, Dahiya A, Dubbu S, Vankar YD. A Stereoselective Synthesis of an Imino Glycal: Application in the Synthesis of (-)-1-epi-Adenophorine and a Homoimindosugar. European J Org Chem 2018. [DOI: 10.1002/ejoc.201801241] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Ande Chennaiah
- Department of Chemistry; Indian Institute of Technology Kanpur; -208016 Kanpur India
| | - Amit Dahiya
- Department of Chemistry; Indian Institute of Technology Kanpur; -208016 Kanpur India
| | - Sateesh Dubbu
- Department of Chemistry; Indian Institute of Technology Kanpur; -208016 Kanpur India
| | - Yashwant D. Vankar
- Department of Chemistry; Indian Institute of Technology Kanpur; -208016 Kanpur India
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12
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Singh G, Azmi S, Ghosh JK, Ampapathi RS, Pal S. Synthesis and Conformational Studies of Taa-Containingo-Nitrobenzenesulfonamide- (o-Nosyl-) Protected GS Analogs to Prove the Importance of 6RStereochemistry of Taa over 6S. ChemistrySelect 2018. [DOI: 10.1002/slct.201800003] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Gajendra Singh
- NMR Research Centre; Division of SAIF; CSIR-Central Drug Research Institute; Lucknow 226031 India
- Academy of Scientific and Innovative Research; New Delhi 110001 India
| | - Sarfuddin Azmi
- Molecular and Structural Biology Division; CSIR-Central Drug Research Institute; Lucknow 226031 India
- Present Address: Research Centre; Prince Sultan Military Medical City, Riyadh, Kingdom of; Saudi Arabia
| | - Jimut Kanti Ghosh
- Molecular and Structural Biology Division; CSIR-Central Drug Research Institute; Lucknow 226031 India
| | - Ravi Sankar Ampapathi
- NMR Research Centre; Division of SAIF; CSIR-Central Drug Research Institute; Lucknow 226031 India
- Academy of Scientific and Innovative Research; New Delhi 110001 India
| | - Sudip Pal
- Medicinal & Process Chemistry Division; CSIR-Central Drug Research Institute; Lucknow 226031 India
- Department of Chemistry, School of Physical Sciences; Sikkim University (A Central University); Gangtok 737102 India
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13
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Rajchakit U, Sarojini V. Recent Developments in Antimicrobial-Peptide-Conjugated Gold Nanoparticles. Bioconjug Chem 2017; 28:2673-2686. [DOI: 10.1021/acs.bioconjchem.7b00368] [Citation(s) in RCA: 103] [Impact Index Per Article: 14.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Urawadee Rajchakit
- School of Chemical Sciences, The University of Auckland, Private Bag, 92019 Auckland, New Zealand
| | - Vijayalekshmi Sarojini
- School of Chemical Sciences, The University of Auckland, Private Bag, 92019 Auckland, New Zealand
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14
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Chakraborty A, Boer JC, Selomulya C, Plebanski M. Amino Acid Functionalized Inorganic Nanoparticles as Cutting-Edge Therapeutic and Diagnostic Agents. Bioconjug Chem 2017; 29:657-671. [DOI: 10.1021/acs.bioconjchem.7b00455] [Citation(s) in RCA: 44] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Amlan Chakraborty
- Department of Immunology and Pathology, Central Clinical School, Monash University, Melbourne, Victoria 3004, Australia
| | - Jennifer C. Boer
- Department of Immunology and Pathology, Central Clinical School, Monash University, Melbourne, Victoria 3004, Australia
| | | | - Magdalena Plebanski
- Department of Immunology and Pathology, Central Clinical School, Monash University, Melbourne, Victoria 3004, Australia
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15
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Thakur R, Rawal GK, Vankar YD. Synthesis of Chiral Aziridines from Glycals: Application in the Synthesis of a Piperidine-Azepine Fused Derivative. European J Org Chem 2017. [DOI: 10.1002/ejoc.201700624] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Rima Thakur
- Department of Chemistry; Indian Institute of Technology Kanpur; 208016 Kanpur India
| | - Girish K. Rawal
- Department of Chemistry; Indian Institute of Technology Kanpur; 208016 Kanpur India
| | - Yashwant D. Vankar
- Department of Chemistry; Indian Institute of Technology Kanpur; 208016 Kanpur India
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16
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Pal S, Ghosh U, Singh G, Alam F, Singh S, Chopra S, Sinha S, Ampapathi RS, Chakraborty TK. Synthesis, Conformational Studies and Biological Profiles of Tetrahydrofuran Amino-Acid-Containing Cationic Antitubercular Peptides. ASIAN J ORG CHEM 2017. [DOI: 10.1002/ajoc.201700183] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Sudip Pal
- Medicinal & Process Chemistry Division; CSIR-Central Drug Research Institute; Lucknow 226031 India
| | - Uttam Ghosh
- Department of Organic Chemistry; Indian Institute of Science; Bangalore 560012 India
| | - Gajendra Singh
- NMR Research Centre, Division of SAIF; CSIR-Central Drug Research Institute; Lucknow 226031 India
- Academy of Scientific and Innovative Research; New Delhi 110001 India
| | - Faiyaz Alam
- NMR Research Centre, Division of SAIF; CSIR-Central Drug Research Institute; Lucknow 226031 India
- Academy of Scientific and Innovative Research; New Delhi 110001 India
| | - Shyam Singh
- Biochemistry Division; CSIR-Central Drug Research Institute; Lucknow 226031 India
| | - Sidharth Chopra
- Microbiology Division; CSIR-Central Drug Research Institute; Lucknow 226031 India
| | - Sudhir Sinha
- Biochemistry Division; CSIR-Central Drug Research Institute; Lucknow 226031 India
| | - Ravi Sankar Ampapathi
- NMR Research Centre, Division of SAIF; CSIR-Central Drug Research Institute; Lucknow 226031 India
- Academy of Scientific and Innovative Research; New Delhi 110001 India
| | - Tushar Kanti Chakraborty
- Medicinal & Process Chemistry Division; CSIR-Central Drug Research Institute; Lucknow 226031 India
- Department of Organic Chemistry; Indian Institute of Science; Bangalore 560012 India
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17
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Casciaro B, Moros M, Rivera-Fernández S, Bellelli A, de la Fuente JM, Mangoni ML. Gold-nanoparticles coated with the antimicrobial peptide esculentin-1a(1-21)NH 2 as a reliable strategy for antipseudomonal drugs. Acta Biomater 2017; 47:170-181. [PMID: 27693686 DOI: 10.1016/j.actbio.2016.09.041] [Citation(s) in RCA: 109] [Impact Index Per Article: 15.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2016] [Revised: 09/26/2016] [Accepted: 09/28/2016] [Indexed: 12/22/2022]
Abstract
Naturally occurring antimicrobial peptides (AMPs) hold promise as future therapeutics against multidrug resistant microorganisms. Recently, we have discovered that a derivative of the frog skin AMP esculentin-1a, Esc(1-21), is highly potent against both free living and biofilm forms of the bacterial pathogen Pseudomonas aeruginosa. However, bringing AMPs into clinics requires to overcome their low stability, high toxicity and inefficient delivery to the target site at high concentrations. Importantly, peptide conjugation to gold nanoparticles (AuNPs), which are among the most applied inorganic nanocarriers in biomedical sciences, represents a valuable strategy to solve these problems. Here we report that covalent conjugation of Esc(1-21) to soluble AuNPs [AuNPs@Esc(1-21)] via a poly(ethylene glycol) linker increased by ∼15-fold the activity of the free peptide against the motile and sessile forms of P. aeruginosa without being toxic to human keratinocytes. Furthermore, AuNPs@Esc(1-21) resulted to be significantly more resistant to proteolytic digestion and to disintegrate the bacterial membrane at very low concentration (5nM). Finally, we demonstrated for the first time the capability of peptide-coated AuNPs to display a wound healing activity on a keratinocytes monolayer. Overall, these findings suggest that our engineered AuNPs can serve as attractive novel biological-derived material for topical treatment of epithelial infections and healing of the injured tissue. STATEMENT OF SIGNIFICANCE Despite conjugation of AMPs to AuNPs represents a worthwhile solution to face some limitations for their development as new therapeutics, only a very limited number of studies is available on peptide-coated AuNPs. Importantly, this is the first report showing that a covalent binding of a linear AMP via a poly(ethylene glycol) linker to AuNPs highly enhances antipseudomonal activity, preserving the same mode of action of the free peptide, without being harmful. Furthermore, AuNPs@Esc(1-21) are expected to accelerate recovery of an injured skin layer. All together, these findings suggest our peptide-coated AuNPs as attractive novel nanoscale formulation to treat bacterial infections and to heal the injured tissue.
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18
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Singh N, Kandiyal PS, Shukla PK, Ampapathi RS, Chakraborty TK. Conformational studies of glycosylated cyclic oligomers of furanoid sugar amino acids. Tetrahedron 2016. [DOI: 10.1016/j.tet.2016.07.071] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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19
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Nahar S, Bose D, Pal S, Chakraborty TK, Maiti S. Cyclic Cationic Peptides Containing Sugar Amino Acids Selectively Distinguishes and Inhibits Maturation of Pre-miRNAs of the Same Family. Nucleic Acid Ther 2015; 25:323-9. [DOI: 10.1089/nat.2015.0554] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
Affiliation(s)
- Smita Nahar
- Academy of Scientific and Innovative Research (AcSIR), New Delhi, India
- CSIR-Institute of Genomics and Integrative Biology, New Delhi, India
| | - Debojit Bose
- CSIR-Institute of Genomics and Integrative Biology, New Delhi, India
| | - Sudip Pal
- CSIR-Central Drug Research Institute, Lucknow, India
| | - Tushar Kanti Chakraborty
- CSIR-Central Drug Research Institute, Lucknow, India
- Department of Organic Chemistry, Indian Institute of Science, Bangalore, India
| | - Souvik Maiti
- Academy of Scientific and Innovative Research (AcSIR), New Delhi, India
- CSIR-Institute of Genomics and Integrative Biology, New Delhi, India
- CSIR-National Chemical Laboratory, Pune, India
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20
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Pal S, Ghosh U, Ampapathi RS, Chakraborty TK. Recent Studies on Gramicidin S Analog Structure and Antimicrobial Activity. ACTA ACUST UNITED AC 2015. [DOI: 10.1007/7081_2015_188] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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21
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Baig N, Singh RP, Chander S, Jha PN, Murugesan S, Sah AK. Synthesis, evaluation and molecular docking studies of amino acid derived N-glycoconjugates as antibacterial agents. Bioorg Chem 2015; 63:110-5. [PMID: 26476390 DOI: 10.1016/j.bioorg.2015.10.002] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2015] [Revised: 10/06/2015] [Accepted: 10/07/2015] [Indexed: 11/17/2022]
Abstract
Six amino acid derived N-glycoconjugates of d-glucose were synthesized, characterized and tested for antibacterial activity against G(+)ve (Bacillus cereus) as well as G(-)ve (Escherichia coli and Klebsiella pneumoniae) bacterial strains. All the tested compounds exhibited moderate to good antibacterial activity against these bacterial strains. The results were compared with the antibacterial activity of standard drug Chloramphenicol, where results of A5 (Tryptophan derived glycoconjugates) against E. coli and A4 (Isoleucine derived glycoconjugates) against K. pneumoniae bacterial strains are comparable with the standard drug molecule. In silico docking studies were also performed in order to understand the mode of action and binding interactions of these molecules. The docking studies revealed that, occupation of compound A5 at the ATP binding site of subunit GyrB (DNA gyrase, PDB ID: 3TTZ) via hydrophobic and hydrogen bonding interactions may be the reason for its significant in vitro antibacterial activity.
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Affiliation(s)
- Noorullah Baig
- Department of Chemistry, Birla Institute of Technology and Science, Pilani, Pilani Campus, Rajasthan 333031, India
| | - Rajnish Prakash Singh
- Department of Biological Science, Birla Institute of Technology and Science, Pilani, Pilani Campus, Rajasthan 333031, India
| | - Subhash Chander
- Department of Pharmacy, Birla Institute of Technology and Science, Pilani, Pilani Campus, Rajasthan 333031, India
| | - Prabhat Nath Jha
- Department of Biological Science, Birla Institute of Technology and Science, Pilani, Pilani Campus, Rajasthan 333031, India
| | - Sankaranarayanan Murugesan
- Department of Pharmacy, Birla Institute of Technology and Science, Pilani, Pilani Campus, Rajasthan 333031, India
| | - Ajay K Sah
- Department of Chemistry, Birla Institute of Technology and Science, Pilani, Pilani Campus, Rajasthan 333031, India.
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22
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Rai S, Singh H, Priyakumar UD. Binding to gold nanoclusters alters the hydrogen bonding interactions and electronic properties of canonical and size-expanded DNA base pairs. RSC Adv 2015. [DOI: 10.1039/c5ra04668h] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022] Open
Abstract
Structural perturbations, in terms of size expansion and metal binding, lead to exciting electronic properties which can be exploited in designing novel nano-electronic devices.
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Affiliation(s)
- Sandhya Rai
- Center for Computational Natural Science and Bioinformatics
- International Institute of Information Technology
- Hyderabad
- India
| | - Harjinder Singh
- Center for Computational Natural Science and Bioinformatics
- International Institute of Information Technology
- Hyderabad
- India
| | - U. Deva Priyakumar
- Center for Computational Natural Science and Bioinformatics
- International Institute of Information Technology
- Hyderabad
- India
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23
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Zhang Y, Shareena Dasari TP, Deng H, Yu H. Antimicrobial Activity of Gold Nanoparticles and Ionic Gold. JOURNAL OF ENVIRONMENTAL SCIENCE AND HEALTH. PART C, ENVIRONMENTAL CARCINOGENESIS & ECOTOXICOLOGY REVIEWS 2015; 33:286-327. [PMID: 26072980 DOI: 10.1080/10590501.2015.1055161] [Citation(s) in RCA: 167] [Impact Index Per Article: 18.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
Gold, in both nanoparticle (AuNPs) and ionic forms, has been studied for antibiotic activities. Some of the organic complexes of Au (I & III) ions are antibacterial. AuNPs are antifungal, but with conflicting results on their antibacterial activity. We summarized these publications and found that AuNPs are generally not bactericidal, or only weakly at high concentrations. However, the reason AuNPs appear to be bactericidal is possibly due to the bactericidal activity of co-existing chemicals not completely removed from AuNPs: gold ions, surface coating agents, and chemicals involved in the synthesis. AuNPs can also act as carriers or delivery vehicles of antibiotics, thus enhancing the bactericidal effect of the antibiotics.
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Affiliation(s)
- Ying Zhang
- a Department of Chemistry and Biochemistry, Jackson State University , Jackson , Mississippi , USA
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24
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Pal S, Singh G, Singh S, Tripathi JK, Ghosh JK, Sinha S, Ampapathi RS, Chakraborty TK. Tetrahydrofuran amino acid-containing gramicidin S analogues with improved biological profiles. Org Biomol Chem 2015; 13:6789-802. [DOI: 10.1039/c5ob00622h] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
Replacement of thed-Phe-Pro units of GS with novel C6-Bn-substituted tetrahydrofuran amino acid minimized its cytotoxicity while preserving its antimicrobial activity, with a few analogs showing selective anti-TB activity as well.
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Affiliation(s)
- Sudip Pal
- Medicinal and Process Chemistry Division
- CSIR-Central Drug Research Institute
- Lucknow-226031
- India
| | - Gajendra Singh
- Centre for Nuclear Magnetic Resonance
- SAIF
- CSIR-Central Drug Research Institute
- Lucknow-226031
- India
| | - Shyam Singh
- Biochemistry Division
- CSIR-Central Drug Research Institute
- Lucknow-226031
- India
| | - Jitendra Kumar Tripathi
- Molecular and Structural Biology Division
- CSIR-Central Drug Research Institute
- Lucknow-226031
- India
| | - Jimut Kanti Ghosh
- Molecular and Structural Biology Division
- CSIR-Central Drug Research Institute
- Lucknow-226031
- India
| | - Sudhir Sinha
- Biochemistry Division
- CSIR-Central Drug Research Institute
- Lucknow-226031
- India
| | - Ravi Sankar Ampapathi
- Centre for Nuclear Magnetic Resonance
- SAIF
- CSIR-Central Drug Research Institute
- Lucknow-226031
- India
| | - Tushar Kanti Chakraborty
- Medicinal and Process Chemistry Division
- CSIR-Central Drug Research Institute
- Lucknow-226031
- India
- Department of Organic Chemistry
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25
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Singh G, Ghosh U, Pal S, Ampapathi RS, Chakraborty TK. βγ-fused turn structures in sugar amino acid (SAA) containing cyclic tetrapeptides with α3δ architecture. Tetrahedron 2014. [DOI: 10.1016/j.tet.2014.06.075] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
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26
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Rodriguez CA, Papanastasiou EA, Juba M, Bishop B. Covalent modification of a ten-residue cationic antimicrobial peptide with levofloxacin. Front Chem 2014; 2:71. [PMID: 25279373 PMCID: PMC4166900 DOI: 10.3389/fchem.2014.00071] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2014] [Accepted: 08/07/2014] [Indexed: 01/10/2023] Open
Abstract
The rampant spread of antibiotic resistant bacteria has spurred interest in alternative strategies for developing next-generation antibacterial therapies. As such, there has been growing interest in cationic antimicrobial peptides (CAMPs) and their therapeutic applications. Modification of CAMPs via conjugation to auxiliary compounds, including small molecule drugs, is a new approach to developing effective, broad-spectrum antibacterial agents with novel physicochemical properties and versatile antibacterial mechanisms. Here, we've explored design parameters for engineering CAMPs conjugated to small molecules with favorable physicochemical and antibacterial properties by covalently affixing a fluoroquinolone antibiotic, levofloxacin, to the ten-residue CAMP Pep-4. Relative to the unmodified Pep-4, the conjugate was found to demonstrate substantially increased antibacterial potency under high salt concentrations. Historically, it has been observed that most CAMPs lose antibacterial effectiveness in such high ionic strength environments, a fact that has presented a challenge to their development as therapeutics. Physicochemical studies revealed that P4LC was more hydrophobic than Pep-4, while mechanistic findings indicated that the conjugate was more effective at disrupting bacterial membrane integrity. Although the inherent antibacterial effect of the incorporated levofloxacin molecules did not appear to be substantially realized in this conjugate, these findings nevertheless suggest that covalent attachment of small molecule antibiotics with favorable physicochemical properties to CAMPs could be a promising strategy for enhancing peptide performance and overall therapeutic potential. These results have broader applicability to the development of future CAMP-antibiotic conjugates for potential therapeutic applications.
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Affiliation(s)
- Carlos A Rodriguez
- Department of Chemistry and Biochemistry, George Mason University Fairfax, VA, USA
| | | | - Melanie Juba
- Department of Chemistry and Biochemistry, George Mason University Fairfax, VA, USA
| | - Barney Bishop
- Department of Chemistry and Biochemistry, George Mason University Fairfax, VA, USA
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27
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Elduque X, Pedroso E, Grandas A. Orthogonal protection of peptides and peptoids for cyclization by the thiol-ene reaction and conjugation. J Org Chem 2014; 79:2843-53. [PMID: 24617567 DOI: 10.1021/jo500427c] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Cyclic peptides and peptoids were prepared using the thiol-ene Michael-type reaction. The linear precursors were provided with additional functional groups allowing for subsequent conjugation: an orthogonally protected thiol, a protected maleimide, or an alkyne. The functional group for conjugation was placed either within the cycle or in an external position. The click reactions employed for conjugation with suitably derivatized nucleoside or oligonucleotides were either cycloadditions (Diels-Alder, Cu(I)-catalyzed azide-alkyne) or the same Michael-type reaction as for cyclization.
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Affiliation(s)
- Xavier Elduque
- Departament de Química Orgànica i IBUB, Facultat de Química, Universitat de Barcelona , Martí i Franquès 1-11, 08028 Barcelona, Spain
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28
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Kalaitzakis D, Antonatou E, Vassilikogiannakis G. One-pot synthesis of 1-azaspiro frameworks initiated by photooxidation of simple furans. Chem Commun (Camb) 2014; 50:400-2. [DOI: 10.1039/c3cc47690a] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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29
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Herndon JW. The chemistry of the carbon-transition metal double and triple bond: Annual survey covering the year 2011. Coord Chem Rev 2013. [DOI: 10.1016/j.ccr.2013.05.011] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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30
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Zhao Y, Jiang X. Multiple strategies to activate gold nanoparticles as antibiotics. NANOSCALE 2013; 5:8340-50. [PMID: 23893008 DOI: 10.1039/c3nr01990j] [Citation(s) in RCA: 113] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Widespread antibiotic resistance calls for new strategies. Nanotechnology provides a chance to overcome antibiotic resistance by multiple antibiotic mechanisms. This paper reviews the progress in activating gold nanoparticles with nonantibiotic or antibiotic molecules to combat bacterial resistance, analyzes the gap between experimental achievements and real clinical application, and suggests some potential directions in developing antibacterial nanodrugs.
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Affiliation(s)
- Yuyun Zhao
- CAS Key Lab for Biological Effects of Nanomaterials and Nanosafety, National Center for NanoScience and Technology, 11 Beiyitiao, ZhongGuanCun, 100190, Beijing, China
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31
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Chaveriat L, Gosselin I, Machut C, Martin P. Synthesis, surface tension properties and antibacterial activities of amphiphilic d -galactopyranose derivatives. Eur J Med Chem 2013; 62:177-86. [DOI: 10.1016/j.ejmech.2012.12.032] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2012] [Revised: 12/11/2012] [Accepted: 12/16/2012] [Indexed: 11/26/2022]
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32
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Lahiri R, Suman Reddy Y, Kulkarni SA, Vankar YD. Synthesis of unnatural indolizidines, pyrrolizidine and C-alkyl iminosugars from sugar derived hemiaminals. RSC Adv 2013. [DOI: 10.1039/c3ra43510e] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023] Open
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33
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Rai S, Singh H. Electronic structure theory based study of proline interacting with gold nano clusters. J Mol Model 2012; 19:4099-109. [DOI: 10.1007/s00894-012-1711-x] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2012] [Accepted: 11/26/2012] [Indexed: 11/28/2022]
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34
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Inter- versus intra-molecular cyclization of tripeptides containing tetrahydrofuran amino acids: a density functional theory study on kinetic control. J Mol Model 2012; 18:3181-97. [DOI: 10.1007/s00894-011-1326-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2011] [Accepted: 12/02/2011] [Indexed: 10/14/2022]
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35
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Synthesis of conformationally-constrained thio(seleno)hydantoins and α-triazolyl lactones from d-arabinose as potential glycosidase inhibitors. Tetrahedron 2012. [DOI: 10.1016/j.tet.2012.03.087] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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36
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Bagheri M, Beyermann M, Dathe M. Mode of Action of Cationic Antimicrobial Peptides Defines the Tethering Position and the Efficacy of Biocidal Surfaces. Bioconjug Chem 2011; 23:66-74. [DOI: 10.1021/bc200367f] [Citation(s) in RCA: 50] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Mojtaba Bagheri
- Leibniz Institute of Molecular Pharmacology, Robert-Roessle-Str. 10, 13125
Berlin, Germany
- Institut
für Pharmazeutische
Biotechnologie, Universität des Saarlandes, Universitätscampus, Gebäude C2 3, 66123 Saarbrücken,
Germany
| | - Michael Beyermann
- Leibniz Institute of Molecular Pharmacology, Robert-Roessle-Str. 10, 13125
Berlin, Germany
| | - Margitta Dathe
- Leibniz Institute of Molecular Pharmacology, Robert-Roessle-Str. 10, 13125
Berlin, Germany
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