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Rezaie F, Noorizadeh S. Theoretical investigation of tube-like supramolecular structures formed through bifurcated lithium bonds. Sci Rep 2023; 13:15260. [PMID: 37709798 PMCID: PMC10502010 DOI: 10.1038/s41598-023-41979-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2023] [Accepted: 09/04/2023] [Indexed: 09/16/2023] Open
Abstract
The stability of three supramolecular naostructures, which are formed through the aggregation of identical belts of [12] arene containing p-nitrophenyllithium, 1,4-dilithiatedbenzene and 1,4-dinitrobenzene units, is investigated by density functional theory. The electrostatic potential calculations indicate the ability of these belts in forming bifurcated lithium bonds (BLBs) between the Li atoms of one belt and the oxygen atoms of the NO2 groups in the other belt, which is also confirmed by deformation density maps and quantum theory of atoms in molecules (QTAIM) analysis. Topological analysis and natural bond analysis (NBO) imply to ionic character for these BLBs with binding energies up to approximately - 60 kcal mol-1. The many-body interaction energy analysis shows the strong cooperativity belongs to the configuration with the highest symmetry (C4v) containing p-nitrophenyllithium fragments as the building unit. Therefore, it seems that this configuration could be a good candidate for designing a BLB-based supramolecular nanotube with infinite size in this study.
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Affiliation(s)
- Forough Rezaie
- Chemistry Department, Faculty of Sciences, Shahid Chamran University of Ahvaz, Ahvaz, Iran
| | - Siamak Noorizadeh
- Chemistry Department, Faculty of Sciences, Shahid Chamran University of Ahvaz, Ahvaz, Iran.
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Sullivan MG, Sokolow GE, Jensen ET, Crawley MR, MacMillan SN, Cook TR. Altering the solubility of metal-organic polyhedra via pendant functionalization of Cp 3Zr 3O(OH) 3 nodes. Dalton Trans 2023; 52:338-346. [PMID: 36510835 DOI: 10.1039/d2dt03401h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
The chemistry of zirconium-based metal-organic polyhedra (ZrMOPs) is often limited by their poor solubilities. Despite their attractive features-including high yielding and facile syntheses, predictable topologies, high stability, and tunability-problematic solubilities have caused ZrMOPs to be under-studied and under-applied. Although these cages have been synthesized with a wide variety of carboxylate-based bridging ligands, we explored a new method for ZrMOP functionalization via node-modification, which we hypothesized could influence solubility. Herein, we report ZrMOPs with benzyl-, vinylbenzyl-, and trifluoromethylbenzyl-pendant groups decorating cyclopentadienyl moieties. The series was characterized by 1H/19F NMR, high-resolution mass spectrometry, infrared spectroscopy, and single-crystal X-ray diffraction. The effects of node functionalities on ZrMOP solubility were quantified using inductively coupled plasma mass spectrometry. Substitution caused a decrease in water solubility, but for certain organic solvents, e.g. DMF, solubility could be enhanced by ∼20×, from 16 μM for the unfunctionalized cage to 310 μM for the vinylbenzyl- and trifluoromethylbenzyl-cages.
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Affiliation(s)
- Meghan G Sullivan
- Department of Chemistry, University at Buffalo, The State University of New York, Buffalo, New York, 14260, USA.
| | - Gregory E Sokolow
- Department of Chemistry, University at Buffalo, The State University of New York, Buffalo, New York, 14260, USA.
| | - Eric T Jensen
- Chemistry Instrument Center, Department of Chemistry, University at Buffalo, State University of New York, Buffalo, NY 14260, USA
| | - Matthew R Crawley
- Department of Chemistry, University at Buffalo, The State University of New York, Buffalo, New York, 14260, USA.
| | - Samantha N MacMillan
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, USA
| | - Timothy R Cook
- Department of Chemistry, University at Buffalo, The State University of New York, Buffalo, New York, 14260, USA.
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Solid state NMR and computational studies on cyclopentadienyl lithium. J Mol Model 2019; 25:196. [DOI: 10.1007/s00894-019-4025-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2019] [Accepted: 04/04/2019] [Indexed: 10/26/2022]
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Spisak SN, Wei Z, Rogachev AY, Amaya T, Hirao T, Petrukhina MA. Double Concave Cesium Encapsulation by Two Charged Sumanenyl Bowls. Angew Chem Int Ed Engl 2017; 56:2582-2587. [DOI: 10.1002/anie.201610696] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2016] [Revised: 01/09/2017] [Indexed: 11/07/2022]
Affiliation(s)
- Sarah N. Spisak
- Department of Chemistry; University at Albany, State University of New York; 1400 Washington Avenue Albany NY 12222 USA
| | - Zheng Wei
- Department of Chemistry; University at Albany, State University of New York; 1400 Washington Avenue Albany NY 12222 USA
| | - Andrey Yu. Rogachev
- Department of Chemistry; Illinois Institute of Technology; Chicago IL 60616 USA
| | - Toru Amaya
- Department of Applied Chemistry; Graduate School of Engineering; Osaka University; Yamada-oka, Suita Osaka 565-0871 Japan
| | - Toshikazu Hirao
- Department of Applied Chemistry; Graduate School of Engineering; Osaka University; Yamada-oka, Suita Osaka 565-0871 Japan
- The Institute of Scientific and Industrial Research; Osaka University; Mihoga-oka, Ibaraki Osaka 567-0047 Japan
| | - Marina A. Petrukhina
- Department of Chemistry; University at Albany, State University of New York; 1400 Washington Avenue Albany NY 12222 USA
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Spisak SN, Wei Z, Rogachev AY, Amaya T, Hirao T, Petrukhina MA. Double Concave Cesium Encapsulation by Two Charged Sumanenyl Bowls. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201610696] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Sarah N. Spisak
- Department of Chemistry; University at Albany, State University of New York; 1400 Washington Avenue Albany NY 12222 USA
| | - Zheng Wei
- Department of Chemistry; University at Albany, State University of New York; 1400 Washington Avenue Albany NY 12222 USA
| | - Andrey Yu. Rogachev
- Department of Chemistry; Illinois Institute of Technology; Chicago IL 60616 USA
| | - Toru Amaya
- Department of Applied Chemistry; Graduate School of Engineering; Osaka University; Yamada-oka, Suita Osaka 565-0871 Japan
| | - Toshikazu Hirao
- Department of Applied Chemistry; Graduate School of Engineering; Osaka University; Yamada-oka, Suita Osaka 565-0871 Japan
- The Institute of Scientific and Industrial Research; Osaka University; Mihoga-oka, Ibaraki Osaka 567-0047 Japan
| | - Marina A. Petrukhina
- Department of Chemistry; University at Albany, State University of New York; 1400 Washington Avenue Albany NY 12222 USA
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Spisak SN, Wei Z, O’Neil NJ, Rogachev AY, Amaya T, Hirao T, Petrukhina MA. Convex and Concave Encapsulation of Multiple Potassium Ions by Sumanenyl Anions. J Am Chem Soc 2015; 137:9768-71. [DOI: 10.1021/jacs.5b06662] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Sarah N. Spisak
- Department
of Chemistry, University at Albany, State University of New York, 1400 Washington Avenue, Albany, New York 12222, United States
| | - Zheng Wei
- Department
of Chemistry, University at Albany, State University of New York, 1400 Washington Avenue, Albany, New York 12222, United States
| | - Natalie J. O’Neil
- Department
of Chemistry, University at Albany, State University of New York, 1400 Washington Avenue, Albany, New York 12222, United States
| | - Andrey Yu. Rogachev
- Department
of Biological and Chemical Sciences, Illinois Institute of Technology, Chicago, Illinois 60616, United States
| | - Toru Amaya
- Department
of Applied Chemistry, Graduate School of Engineering, Osaka University, Yamada-oka,
Suita, Osaka 565-0871, Japan
| | - Toshikazu Hirao
- Department
of Applied Chemistry, Graduate School of Engineering, Osaka University, Yamada-oka,
Suita, Osaka 565-0871, Japan
| | - Marina A. Petrukhina
- Department
of Chemistry, University at Albany, State University of New York, 1400 Washington Avenue, Albany, New York 12222, United States
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Filatov AS, Spisak SN, Zabula AV, McNeely J, Rogachev AY, Petrukhina MA. Self-assembly of tetrareduced corannulene with mixed Li-Rb clusters: dynamic transformations, unique structures and record 7Li NMR shifts. Chem Sci 2015; 6:1959-1966. [PMID: 28717455 PMCID: PMC5496504 DOI: 10.1039/c4sc03485f] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2014] [Accepted: 12/16/2014] [Indexed: 11/21/2022] Open
Abstract
Self-assembly processes of the highly reduced bowl-shaped corannulene generated by the chemical reduction with a binary combination of alkali metals, namely Li-Rb, have been investigated by variable-temperature 1H and 7Li NMR spectroscopy. The formation of several unique mixed metal sandwich products based on tetrareduced corannulene, C20H104- (14-), has been revealed followed by investigation of their dynamic transformations in solutions. Analysis of NMR data allowed to propose the mechanism of stepwise alkali metal substitution as well as to identify experimental conditions for the isolation of intermediate and final supramolecular products. As a result, two new triple-decker aggregates with a mixed Li-Rb core, [{Rb(THF)2}2]//[Li3Rb2(C20H10)2{Li+(THF)}] (2) and [{Rb(diglyme)}2]//[Li3Rb3(C20H10)2(diglyme)2]·0.5THF (3·0.5THF), have been crystallized and structurally characterized. The Li3Rb2-product has an open coordination site at the sandwich periphery and thus is considered transient on the way to the Li3Rb3-sandwich having the maximized intercalated alkali metal content. Next, the formation of the LiRb5 self-assembly with 14- has been identified by 7Li NMR as the final step in a series of dynamic transformations in this system. This product was also isolated and crystallographically characterized to confirm the LiRb5 core. Notably, all sandwiches have their central cavities, located in between the hub-sites of two C20H104- decks, occupied by an internal Li+ ion which exhibits the record high negative shift (ranging from -21 to -25 ppm) in 7Li NMR spectra. The isolation of three novel aggregates having different Li-Rb core compositions allowed us to look into the origin of the unusual 7Li NMR shifts at the molecular level. The discussion of formation mechanisms, dynamic transformations as well as unique electronic structures of these remarkable mixed alkali metal organometallic self-assemblies is provided and supported by DFT calculations.
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Affiliation(s)
- Alexander S Filatov
- Department of Chemistry , University at Albany , State University of New York , Albany , NY 12222 , USA .
| | - Sarah N Spisak
- Department of Chemistry , University at Albany , State University of New York , Albany , NY 12222 , USA .
| | - Alexander V Zabula
- Department of Chemistry , University of Wisconsin , Madison , WI 53706 , USA
| | - James McNeely
- Department of Biological and Chemical Sciences , Illinois Institute of Technology , Chicago , IL 60616 , USA
| | - Andrey Yu Rogachev
- Department of Biological and Chemical Sciences , Illinois Institute of Technology , Chicago , IL 60616 , USA
| | - Marina A Petrukhina
- Department of Chemistry , University at Albany , State University of New York , Albany , NY 12222 , USA .
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