Particle-phase accretion forms dimer esters in pinene secondary organic aerosol

Secondary organic aerosol (SOA) is ubiquitous in the atmosphere and plays a pivotal role in climate, air quality, and health. The production of low-volatility dimeric compounds through accretion reactions is a key aspect of SOA formation. However, despite extensive study, the structures and thus the formation mechanisms of dimers in SOA remain largely uncharacterized. In this work, we elucidate the structures of several major dimer esters in SOA from ozonolysis of α-pinene and β-pinene-substantial global SOA sources-through independent synthesis of authentic standards. We show that these dimer esters are formed in the particle phase and propose a mechanism of nucleophilic addition of alcohols to a cyclic acylperoxyhemiacetal. This chemistry likely represents a general pathway to dimeric compounds in ambient SOA.

Formation of Highly Oxidized Organic Compounds and Secondary Organic Aerosol from α-Thujene Ozonolysis

We conducted laboratory chamber experiments to probe the gas- and particle-phase composition of oxidized organics and secondary organic aerosol (SOA) formed from α-thujene ozonolysis under different chemical regimes. The formation of low-volatility compounds was observed using chemical ionization mass spectrometry with nitrate (NO3-) and iodide (I-) reagent ions. The contribution of measured low-volatility compounds to particle growth was predicted using a simple condensational growth model and found to underpredict the measured growth rates in our chamber (on the order of several nm min-1). The yields of low-volatility compounds and SOA mass were similar to those of other monoterpene ozonolysis systems. While semivolatile compounds C10H14-16O3-7 were measured most abundantly with I- reagent ion, a large fraction of products measured with NO3- were C5-7 fragments with predicted intermediate volatility. Additionally, particle composition was measured with ultrahigh-performance liquid chromatography with high-resolution mass spectrometry and compared to particle composition from α-pinene ozonolysis. Structural isomers were identified from tandem mass spectrometry analysis of two abundant product ions (C8H13O5-, C19H27O7-). Our results indicate that although this system efficiently generates low-volatility organics and SOA under the conditions studied, fragmentation pathways that produce more highly volatile products effectively compete with these processes.

A neglected pathway for the accretion products formation in the atmosphere

Highly oxygenated organic molecules (HOM) formed by the autoxidation of α-pinene initiated by OH radicals play an important role in new particle formation. It is believed that the accretion products, ROOR´, formed by the self- and cross-reaction of peroxy radicals (RO₂ + R'O₂ reactions), have extremely low volatility and are more likely to participate in nucleation. However, the mechanism of ROOR´ formation has not been fully demonstrated by experiment or theoretical calculation. Herein, we propose a novel mechanism of RO₂ reacting with α-pinene (RO₂ + α-pinene reactions) that have much lower potential barriers and larger rate constants than the reaction of RO₂ with R'O₂, which explains the ROOR´ formation found in the mass spectrometry experiments. The ROOR´ resulting from the reaction of RO₂ with α-pinene can produce HOM dimers and trimers with a higher oxygen-to‑carbon (O/C) ratio through a autoxidation chain. We also demonstrated that the presence of NO_x and HO₂ radical will reduce the RO₂ concentration, but cannot completely inhibit the formation of HOM monomers and ROOR´. Even if one or both of RO₂ radicals are acyl peroxy radicals (RC(O)O₂), the potential barriers of the reactions between RC(O)O₂ and α-pinene (RC(O)O₂ + α-pinene reactions) are lower than that of RO₂ reacting with RC(O)O₂ (RO₂ + RC(O)O₂ reactions) or RC(O)O₂ self-reactions (RC(O)O₂ + RC(O)O₂ reactions). The current work revealed, for the first time, a mechanism of RO₂/RC(O)O₂ reacting with α-pinene in the atmosphere, which provides new insight into the atmospheric chemistry of accretion products as SOA precursors.

Chemistry of Secondary Organic Aerosol Formation from Reactions of Monoterpenes with OH Radicals in the Presence of NOx

The oxidation of volatile organic compounds (VOCs), which are emitted to the atmosphere from natural and anthropogenic sources, leads to the formation of ozone and secondary organic aerosol (SOA) particles that impact air quality and climate. In the study reported here, we investigated the products of the reactions of five biogenic monoterpenes with OH radicals (an important daytime oxidant) under conditions that mimic the chemistry that occurs in polluted air, and developed mechanisms to explain their formation. Experiments were conducted in an environmental chamber, and information on the identity of gas-phase molecular products was obtained using online mass spectrometry, while liquid chromatography and two methods of functional group analysis were used to characterize the SOA composition. The gas-phase products of the reactions were similar to those formed in our previous studies of the reactions of these monoterpenes with NO₃ radicals (an important nighttime oxidant), in that they all contained various combinations of nitrate, carbonyl, hydroxyl, ester, and ether groups. But in spite of this, less SOA was formed in OH/NO_x reactions and it was composed of monomers, while SOA formed in NO₃ radical reactions consisted of acetal and hemiacetal oligomers formed by particle-phase accretion reactions. In addition, it appeared that some monomers underwent particle-phase hydrolysis, whereas oligomers did not. These differences are due primarily to the arrangement of hydroxyl, carbonyl, nitrate, and ether groups in the monomers, which can in turn be explained by differences in OH and NO₃ radical reaction mechanisms. The results provide insight into the impact of VOC structure on the amount and composition of SOA formed by atmospheric oxidation, which influence important aerosol properties such as volatility and hygroscopicity.

Rates and Yields of Unimolecular Reactions Producing Highly Oxidized Peroxy Radicals in the OH-Induced Autoxidation of α-Pinene, β-Pinene, and Limonene

Recent ambient atmospheric measurements have detected highly oxygenated organic molecules (HOMs) at many sites and are a consequence of autoxidation processes occurring at ambient temperatures. Monoterpenes in particular have a propensity to autoxidize although they exhibit a wide range of HOM yields, which may be due to a variety of reasons including reactions with different oxidants like OH and O₃, differing hydrogen (H) atom transfer or peroxy radical cyclization rates, numbers of available reaction pathways, and/or energy loss processes for activated HO-monoterpene or O₃-monoterpene adducts. In this work, the autoxidation mechanisms of (+)-α-pinene, (+)-β-pinene, and (+)-limonene following initial OH oxidation and three successive O₂ additions are examined using density functional theory (DFT) to understand what accounts for the disparity. Rates of different potential autoxidation pathways initiated by OH addition or abstraction reactions are quantified using transition-state theory (TST) and master equation approaches using the lowest-energy conformers. OH abstraction reactions do not appreciably influence HOM production in the pinenes and limit autoxidation for limonene because the subsequent autoxidation reactions are slow while OH addition reactions are found to be the main route to HOMs for all three monoterpenes. Generally, faster autoxidation rates are computed in later unimolecular reactions that produce RO₇ radicals after OH addition (∼10 s^-1 or greater) than rates for RO₅ peroxy radical production (0.2-7 s^-1). Mechanistic pathways that form RO₇ peroxy radicals are similar for all three monoterpenes with a particular bicyclo RO₇ radical involving a five-membered peroxide ring being favored for all three monoterpenes. The molar yields of RO₇ radicals are 4.6% (+10.0/-2.4), 3.8% (+9.1/-2.6), and 7.6% (+13.1/-4.9) for α-pinene, β-pinene, and limonene, respectively, at 298 K and 1 ppb of NO and only significantly decline at NO concentrations exceeding 10 ppb. The higher yield for limonene relative to the pinenes is predominantly a consequence of the initial oxidation step: OH adducts of the bicyclic pinenes have to use the excess energy after OH addition to break one of the rings and make the molecule more flexible for autoxidation although this process is inefficient, while one of the prominent OH adducts for monocyclic limonene does not have to do this and may add O₂ immediately before autoxidizing further. These insights may be used to guide a better representation of these processes in atmospheric models because they affect particulate matter (PM), NO_x, and ozone concentrations via enhanced production of low-volatility species, less early-generation NO_x cycling, and altered organic nitrate production.

Highly Oxygenated Organic Nitrates Formed from NO3 Radical-Initiated Oxidation of β-Pinene

The reactions of biogenic volatile organic compounds (BVOC) with the nitrate radicals (NO₃) are major night-time sources of organic nitrates and secondary organic aerosols (SOA) in regions influenced by BVOC and anthropogenic emissions. In this study, the formation of gas-phase highly oxygenated organic molecules-organic nitrates (HOM-ON) from NO₃-initiated oxidation of a representative monoterpene, β-pinene, was investigated in the SAPHIR chamber (Simulation of Atmosphere PHotochemistry In a large Reaction chamber). Six monomer (C = 7-10, N = 1-2, O = 6-16) and five accretion product (C = 17-20, N = 2-4, O = 9-22) families were identified and further classified into first- or second-generation products based on their temporal behavior. The time lag observed in the peak concentrations between peroxy radicals containing odd and even number of oxygen atoms, as well as between radicals and their corresponding termination products, provided constraints on the HOM-ON formation mechanism. The HOM-ON formation can be explained by unimolecular or bimolecular reactions of peroxy radicals. A dominant portion of carbonylnitrates in HOM-ON was detected, highlighting the significance of unimolecular termination reactions by intramolecular H-shift for the formation of HOM-ON. A mean molar yield of HOM-ON was estimated to be 4.8% (-2.6%/+5.6%), suggesting significant HOM-ON contributions to the SOA formation.

A structure activity relationship for ring closure reactions in unsaturated alkylperoxy radicals

Terpenoids are an important class of multi-unsaturated volatile organic compounds emitted to the atmosphere. During their oxidation in the troposphere, unsaturated peroxy radicals are formed, which may undergo ring closure reactions by an addition of the radical oxygen atom on either of the carbons in the C[double bond, length as m-dash]C double bond. This study describes a quantum chemical and theoretical kinetic study of the rate of ring closure, finding that the reactions are comparatively fast with rates often exceeding 1 s-1 at room temperature, making these reactions competitive in low-NOx environments and allowing for continued autoxidation by ring closure. A structure-activity relationship (SAR) is presented for 5- to 8-membered ring closure in unsaturated RO2 radicals with aliphatic substituents, with some analysis of the impact of oxygenated substituents. H-migration in the cycloperoxide peroxy radicals formed after the ring closure was found to be comparatively slow for unsubstituted RO2 radicals. In the related cycloperoxide alkoxy radicals, migration of H-atoms implanted on the ring was similarly found to be slower than for non-cyclic alkoxy radicals and is typically not competitive against decomposition reactions that lead to cycloperoxide ring breaking. Ring closure reactions may constitute an important reaction channel in the atmospheric oxidation of terpenoids and could promote continued autoxidation, though the impact is likely to be strongly dependent on the specific molecular backbone.

Atmospheric Autoxidation of Amines

Autoxidation has been acknowledged as a major oxidation pathway in a broad range of atmospherically important compounds including isoprene, monoterpenes, and very recently, dimethyl sulfide. Here, we present a high-level theoretical multiconformer transition-state theory study of the atmospheric autoxidation in amines exemplified by the atmospherically important trimethylamine (TMA) and dimethylamine and generalized by the study of the larger diethylamine. Overall, we find that the initial hydrogen shift reactions have rate coefficients greater than 0.1 s^-1 and autoxidation is thus an important atmospheric pathway for amines. This autoxidation efficiently leads to the formation of hydroperoxy amides, a new type of atmospheric nitrogen-containing compounds, and for TMA, we experimentally confirm this. The conversion of amines to hydroperoxy amides may have important implications for nucleation and growth of atmospheric secondary organic aerosols and atmospheric OH recycling.

Atmospheric Oxidation Mechanism of Sabinene Initiated by the Hydroxyl Radicals

The atmospheric oxidation mechanism of sabinene initiated by the OH radical has been studied using quantum chemistry calculations at the CBS-QB3 level and reaction kinetic calculations using transition state theory and unimolecular rate theory coupled with collisional energy transfer. The oxidation is initiated by OH radical additions to the CH₂═C< bond with a branching ratio of ∼(92-96)%, while all the hydrogen atom abstractions count for ∼(4-8)% of branching ratio, which was estimated by comparing the rate coefficients of the reactions of sabinene and sabinaketon with the OH radical. Addition of OH to the ═C< carbon forms radical adduct Ra, while addition of OH to the terminal CH₂═ carbon forms radical adduct Rb, which would break the three-membered ring promptly and almost completely to radical Re. RRKM-ME calculations obtained fractional yields of 0.40, 0.09, and 0.51 for radicals syn-Ra, anti-Ra, and Re, respectively, at 298 K and 760 Torr. In the atmosphere, the syn/ anti-Ra radical would ultimately transform to sabinaketone in the presence of ppbv levels of NO, while in the transformation of the Re radical, both bimolecular reactions and unimolecular H-migrations could occur competitively for the peroxy radicals formed. The H-migrations in peroxy radicals result in the formation of unsaturated multifunctional compounds containing >C═O, -OH, and/or -OOH groups. Formation of sabinaketone from syn- and anti-Ra and formation of acetone from Re are predicted with yields of ∼0.37 and ∼0.38 in the presence of high NO, being larger than while in reasonable agreement with the experimental values of 0.19-0.23 and of 0.21-0.27, respectively.

Synergistic O3 + OH oxidation pathway to extremely low-volatility dimers revealed in β-pinene secondary organic aerosol

Dimeric compounds contribute significantly to the formation and growth of atmospheric secondary organic aerosol (SOA) derived from monoterpene oxidation. However, the mechanisms of dimer production, in particular the relevance of gas- vs. particle-phase chemistry, remain unclear. Here, through a combination of mass spectrometric, chromatographic, and synthetic techniques, we identify a suite of dimeric compounds (C_15-19H_24-32O_5-11) formed from concerted O₃ and OH oxidation of β-pinene (i.e., accretion of O₃- and OH-derived products/intermediates). These dimers account for an appreciable fraction (5.9-25.4%) of the β-pinene SOA mass and are designated as extremely low-volatility organic compounds. Certain dimers, characterized as covalent dimer esters, are conclusively shown to form through heterogeneous chemistry, while evidence of dimer production via gas-phase reactions is also presented. The formation of dimers through synergistic O₃ + OH oxidation represents a potentially significant, heretofore-unidentified source of low-volatility monoterpene SOA. This reactivity also suggests that the current treatment of SOA formation as a sum of products originating from the isolated oxidation of individual precursors fails to accurately reflect the complexity of oxidation pathways at play in the real atmosphere. Accounting for the role of synergistic oxidation in ambient SOA formation could help to resolve the discrepancy between the measured atmospheric burden of SOA and that predicted by regional air quality and global climate models.

Alkoxy Radical Bond Scissions Explain the Anomalously Low Secondary Organic Aerosol and Organonitrate Yields From α-Pinene + NO3

Oxidation of monoterpenes (C₁₀H₁₆) by nitrate radicals (NO₃) constitutes an important source of atmospheric secondary organic aerosol (SOA) and organonitrates. However, knowledge of the mechanisms of their formation is incomplete and differences in yields between similar monoterpenes are poorly understood. In particular, yields of SOA and organonitrates from α-pinene + NO₃ are low, while those from Δ³-carene + NO₃ are high. Using computational methods, we suggest that bond scission of the nitrooxy alkoxy radicals from Δ³-carene lead to the formation of reactive keto-nitrooxy-alkyl radicals, which retain the nitrooxy moiety and can undergo further reactions to form SOA. By contrast, bond scissions of the nitrooxy alkoxy radicals from α-pinene lead almost exclusively to the formation of the relatively unreactive and volatile product pinonaldehyde (C₁₀H₁₆O₂), thereby limiting organonitrate and SOA formation. This hypothesis is supported by laboratory experiments that quantify products of the reaction of α-pinene + NO₃ under atmospherically relevant conditions.

Atmospheric oxidation of halogenated aromatics: comparative analysis of reaction mechanisms and reaction kinetics

Atmospheric transport is the major route for global distribution of semi-volatile compounds such as halogenated aromatics as well as their major exposure route for humans. Their major atmospheric removal process is oxidation by hydroxyl radicals. There is very little information on the reaction mechanism or reaction-path dynamics of atmospheric degradation of halogenated benzenes. Furthermore, the measured reaction rate constants are missing for the range of environmentally relevant temperatures, i.e. 230-330 K. A series of recent theoretical studies have provided those valuable missing information for fluorobenzene, chlorobenzene, hexafluorobenzene and hexachlorobenzene. Their comparative analysis has provided additional and more general insight into the mechanism of those important tropospheric degradation processes as well as into the mobility, transport and atmospheric fate of halogenated aromatic systems. It was demonstrated for the first time that the addition of hydroxyl radicals to monohalogenated as well as to perhalogenated benzenes proceeds indirectly, via a prereaction complex and its formation and dynamics have been characterized including the respective transition-state. However, in fluorobenzene and chlorobenzene reactions hydroxyl radical hydrogen is pointing approximately to the center of the aromatic ring while in the case of hexafluorobenzene and hexachlorobenzene, unexpectedly, the oxygen is directed towards the center of the aromatic ring. The reliable rate constants are now available for all environmentally relevant temperatures for the tropospheric oxidation of fluorobenzene, chlorobenzene, hexafluorobenzene and hexachlorobenzene while pentachlorophenol, a well-known organic micropollutant, seems to be a major stable product of tropospheric oxidation of hexachlorobenzene. Their calculated tropospheric lifetimes show that fluorobenzene and chlorobenzene are easily removed from the atmosphere and do not have long-range transport potential while hexafluorobenzene seems to be a potential POP chemical and hexachlorobenzene is clearly a typical persistent organic pollutant.

Hydroxyl radical-induced formation of highly oxidized organic compounds

Explaining the formation of secondary organic aerosol is an intriguing question in atmospheric sciences because of its importance for Earth's radiation budget and the associated effects on health and ecosystems. A breakthrough was recently achieved in the understanding of secondary organic aerosol formation from ozone reactions of biogenic emissions by the rapid formation of highly oxidized multifunctional organic compounds via autoxidation. However, the important daytime hydroxyl radical reactions have been considered to be less important in this process. Here we report measurements on the reaction of hydroxyl radicals with α- and β-pinene applying improved mass spectrometric methods. Our laboratory results prove that the formation of highly oxidized products from hydroxyl radical reactions proceeds with considerably higher yields than previously reported. Field measurements support these findings. Our results allow for a better description of the diurnal behaviour of the highly oxidized product formation and subsequent secondary organic aerosol formation in the atmosphere.

Secondary organic aerosols are important contributors to the Earth's radiation budget, however questions remain about their formation from highly-oxidized precursors. Here the authors show that the daytime reaction of hydroxyl radicals with α- and β-pinene is a greater source of highly-oxidized products than previously assumed.

Quantum chemical study on the stability of honeybee queen pheromone against atmospheric factors

The managed honeybee, Apis mellifera, has been experienced a puzzling event, termed as colony collapse disorder (CCD), in which worker bees abruptly disappear from their hives. Potential factors include parasites, pesticides, malnutrition, and environmental stresses. However, so far, no definitive relationship has been established between specific causal factors and CCD events. Here we theoretically test whether atmospheric environment could disturb the chemical communication between the queen and their workers in a colony. A quantum chemistry method has been used to investigate for the stability of the component of A. mellifera queen mandibular pheromone (QMP), (E)-9-keto-2-decenoic acid (9-ODA), against atmospheric water and free radicals. The results show that 9-ODA is less likely to react with water due to the high barrier heights (~36.5 kcal · mol(-1)) and very low reaction rates. However, it can easily react with triplet oxygen and hydroxyl radicals because of low or negative energy barriers. Thus, the atmospheric free radicals may disturb the chemical communication between the queen and their daughters in a colony. Our pilot study provides new insight for the cause of CCD, which has been reported throughout the world.

Experimental and Theoretical Study of Reactions of OH Radicals with Hexenols: An Evaluation of the Relative Importance of the H-Abstraction Reaction Channel

C6 hexenols are one of the most significant groups of volatile organic compounds with biogenic emissions. The lack of corresponding kinetic parameters and product information on their oxidation reactions will result in incomplete atmospheric chemical mechanisms and models. In this paper, experimental and theoretical studies are reported for the reactions of OH radicals with a series of C6 hexenols, (Z)-2-hexen-1-ol, (Z)-3-hexen-1-ol, (Z)-4-hexen-1-ol, (E)-2-hexen-1-ol, (E)-3-hexen-1-ol, and (E)-4-hexen-1-ol, at 298 K and 1.01 × 10(5) Pa. The corresponding rate constants were 8.53 ± 1.36, 10.1 ± 1.6, 7.86 ± 1.30, 8.08 ± 1.33, 9.10 ± 1.50, and 7.14 ± 1.20 (in units of 10(-11) cm(3) molecule(-1) s(-1)), respectively, measured by gas chromatography with a flame ionization detector (GC-FID), using a relative technique. Theoretical calculations concerning the OH-addition and H-abstraction reaction channels were also performed for these reactions to further understand the reaction mechanism and the relative importance of the H-abstraction reaction. By contrast to previously reported results, the H-abstraction channel is a non-negligible reaction channel for reactions of OH radicals with these hexenols. The rate constants of the H-abstraction channel are comparable with those for the OH-addition channel and contribute >20% for most of the studied alcohols, even >50% for (E)-3-hexen-1-ol. Thus, H-abstraction channels may have an important role in the reactions of these alcohols with OH radicals and must be considered in certain atmospheric chemical mechanisms and models.

Direct observation and kinetics of a hydroperoxyalkyl radical (QOOH)

Oxidation of organic compounds in combustion and in Earth’s troposphere is mediated by reactive species formed by the addition of molecular oxygen (O2) to organic radicals. Among the most crucial and elusive of these intermediates are hydroperoxyalkyl radicals, often denoted “QOOH.” These species and their reactions with O2 are responsible for the radical chain branching that sustains autoignition and are implicated in tropospheric autoxidation that can form low-volatility, highly oxygenated organic aerosol precursors. We report direct observation and kinetics measurements of a QOOH intermediate in the oxidation of 1,3-cycloheptadiene, a molecule that offers insight into both resonance-stabilized and nonstabilized radical intermediates. The results establish that resonance stabilization dramatically changes QOOH reactivity and, hence, that oxidation of unsaturated organics can produce exceptionally long-lived QOOH intermediates.