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Isomerization of cyclobutane ligands in the solid state and solution. J INDIAN CHEM SOC 2022. [DOI: 10.1016/j.jics.2022.100630] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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2
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Santana CL, Reinheimer EW, Groeneman RH. Square network based upon the molecular salt of the tetraprotonated photoproduct rtct-tetrakis(pyridin-4-yl)cyclobutane and the sulfate anion. ACTA CRYSTALLOGRAPHICA SECTION C-STRUCTURAL CHEMISTRY 2021; 77:561-565. [PMID: 34482300 DOI: 10.1107/s2053229621008597] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/10/2021] [Accepted: 08/17/2021] [Indexed: 11/10/2022]
Abstract
The formation and crystal structure of a hydrated molecular salt that results in a square network is reported. The crystalline solid is based upon the tetraprotonated photoproduct rtct-tetrakis(pyridin-4-yl)cyclobutane (4H-rtct-TPCB)4+ along with two sulfate anions (SO42-) and eight waters of hydration, namely, 4,4',4'',4'''-(cyclobutane-1,2,3,4-tetrayl)tetrapyridinium bis(sulfate) octahydrate, C24H24N44+·2SO42-·8H2O. The fully protonated photoproduct acts as a four-connecting node within the square network by engaging in four charge-assisted N+-H...O hydrogen bonds to the sulfate anion. The observed hydrogen-bonding pattern in this square network is akin to T-silica, which is a metastable form of SiO2. The included water molecules and sulfate anions engage in numerous O-H...O hydrogen bonds to form various hydrogen-bonded ring structures.
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Affiliation(s)
- Carlos L Santana
- Department of Biological Sciences, Webster University, St Louis, Missouri 63119, USA
| | | | - Ryan H Groeneman
- Department of Biological Sciences, Webster University, St Louis, Missouri 63119, USA
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Peedikakkal AMP, Al-Mohsin H, Jalilov A, Sølling TI, Skov AB. Design of Green-Emitting Salts from Substituted Pyridines: Understanding the Solid-State Photodimerization of trans-1,2-bis(4-pyridyl)ethylene. Chemphyschem 2021; 22:1088-1093. [PMID: 33900679 DOI: 10.1002/cphc.202100143] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2021] [Revised: 03/27/2021] [Indexed: 11/05/2022]
Abstract
Polymorphic salts of trans-1,2-bis(4-pyridyl)ethylene (bpe), 2[bpeH2 ] ⋅ (SO4 )(2HSO4 ) (1) and [bpeH2 ] ⋅ 2HSO4 (2) have been synthesized and their structures determined by X-ray crystallography. The Schmidt postulate predicts that neither of the salts will give rise to photodimerization so they can both potentially be applied as green light emitters. Despite the predictions, 1 undergoes a stereospecific solid-state photodimerization reaction with 100 % yield. This is due to UV induced combination of sliding and pedal-like movement of the pyridyl ring system that influences the alignment of C=C bonds. The sliding motion is restricted in 2. Consequently, the green emission from 1 is completely quenched after photodimerization. It is evident that counter ions play a dominant role in dis- and enabling photodimerization; their degree of protonization and lattice placement are important solvent controlled design parameters towards crystal structures that can act as future light emitters.
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Affiliation(s)
| | - Hasan Al-Mohsin
- Department of Chemistry, King Fahad University of Petroleum & Minerals, Dhahran, 31261, Saudi Arabia
| | - Almaz Jalilov
- Department of Chemistry, King Fahad University of Petroleum & Minerals, Dhahran, 31261, Saudi Arabia
| | - Theis I Sølling
- Center for Integrative Petroleum Research, College of Petroleum & Geosciences, King Fahad University of Petroleum & Minerals, Dhahran, 31261, Saudi Arabia
| | - Anders B Skov
- Center for Integrative Petroleum Research, College of Petroleum & Geosciences, King Fahad University of Petroleum & Minerals, Dhahran, 31261, Saudi Arabia.,Department of Stability and Analysis Development Hospital Pharmacy of the Capital Region, Marielundvej 25, 2730, Herlev, Denmark
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Kölsch S, Ihmels H, Mattay J, Sewald N, Patrick BO. Reversible photoswitching of the DNA-binding properties of styrylquinolizinium derivatives through photochromic [2 + 2] cycloaddition and cycloreversion. Beilstein J Org Chem 2020; 16:111-124. [PMID: 32082430 PMCID: PMC7006495 DOI: 10.3762/bjoc.16.13] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2019] [Accepted: 01/08/2020] [Indexed: 12/17/2022] Open
Abstract
It was demonstrated that styrylquinolizinium derivatives may be applied as photoswitchable DNA ligands. At lower ligand:DNA ratios (≤1.5), these compounds bind to duplex DNA by intercalation, with binding constants ranging from K b = 4.1 × 104 M to 2.6 × 105 M (four examples), as shown by photometric and fluorimetric titrations as well as by CD and LD spectroscopic analyses. Upon irradiation at 450 nm, the methoxy-substituted styrylquinolizinium derivatives form the corresponding syn head-to-tail cyclobutanes in a selective [2 + 2] photocycloaddition, as revealed by X-ray diffraction analysis of the reaction products. These photodimers bind to DNA only weakly by outside-edge association, but they release the intercalating monomers upon irradiation at 315 nm in the presence of DNA. As a result, it is possible to switch between these two ligands and likewise between two different binding modes by irradiation with different excitation wavelengths.
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Affiliation(s)
- Sarah Kölsch
- Department of Chemistry and Biology, Organic Chemistry II, University of Siegen, Adolf-Reichwein-Str. 2, D-57068 Siegen, Germany
| | - Heiko Ihmels
- Department of Chemistry and Biology, Organic Chemistry II, University of Siegen, Adolf-Reichwein-Str. 2, D-57068 Siegen, Germany
| | - Jochen Mattay
- Department of Chemistry, Organic and Bioorganic Chemistry, Bielefeld University, PO Box 100121, D-33501 Bielefeld, Germany
| | - Norbert Sewald
- Department of Chemistry, Organic and Bioorganic Chemistry, Bielefeld University, PO Box 100121, D-33501 Bielefeld, Germany
| | - Brian O Patrick
- Department of Chemistry, Structural Chemistry Facility, The University of British Columbia, 2036 Main Mall, V6T 1Z1, Vancouver, BC, Canada
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Campillo-Alvarado G, Aslan K, Sinnwell MA, Reinheimer EW, Santhana Mariappan SV, MacGillivray LR, Groeneman RH. A solid-state [2 + 2] photodimerization involving coordination of Ag(I) ions to 2-pyridyl groups. J COORD CHEM 2018. [DOI: 10.1080/00958972.2018.1501480] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Affiliation(s)
| | - Katerina Aslan
- Department of Biological Sciences, Webster University, St. Louis, MO, USA
| | | | - Eric W. Reinheimer
- Department of Chemistry and the W.M. Keck Foundation Center for Molecular Structure, California State University, San Marcos, CA, USA
| | | | | | - Ryan H. Groeneman
- Department of Biological Sciences, Webster University, St. Louis, MO, USA
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Ortega G, Briceño A. Template-stereocontrolled [2 + 2] photoreactions directed by surface recognition on hydrophilic functionalized carbon materials. CrystEngComm 2018. [DOI: 10.1039/c7ce01090g] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Abstract
Supramolecular assistance either in solution or in the solid state to the regioselective synthesis of single photodimers from [2 + 2] photoreactions surface-directed by multivalent H-bonding exo-templates based on hydrophilic carbon nanomaterials is shown.
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Affiliation(s)
- Gabriela Ortega
- Laboratorio de Síntesis y Caracterización de Nuevos Materiales
- Centro de Química
- Instituto Venezolano de Investigaciones Científicas
- San Antonio de Los Altos
- Venezuela
| | - Alexander Briceño
- Laboratorio de Síntesis y Caracterización de Nuevos Materiales
- Centro de Química
- Instituto Venezolano de Investigaciones Científicas
- San Antonio de Los Altos
- Venezuela
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7
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Cai LX, Chen C, Zhang YJ, Yang XD, Zhang J. Photodimerization of an olefin-containing pyridinium-based metal–organic complex and isomerization of its cyclobutane product upon recrystallization. CrystEngComm 2016. [DOI: 10.1039/c6ce00724d] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Briceño A, Leal D, Díaz de Delgado G. A novel example of double reactivity by either photochemical [2+2] or thermal additions of an ionic organic supramolecular assembly. NEW J CHEM 2015. [DOI: 10.1039/c5nj00678c] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
An example of double reactivity in the solid state was achieved from an ionic array directed by charge-assisted hydrogen bonds.
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Affiliation(s)
- Alexander Briceño
- Laboratorio de Síntesis y Caracterización de Nuevos Materiales
- Centro de Química
- Instituto Venezolano de Investigaciones Científicas (IVIC)
- Apartado 21827
- Venezuela
| | - Dayana Leal
- Laboratorio de Síntesis y Caracterización de Nuevos Materiales
- Centro de Química
- Instituto Venezolano de Investigaciones Científicas (IVIC)
- Apartado 21827
- Venezuela
| | - Graciela Díaz de Delgado
- Universidad de Los Andes (ULA)
- Facultad de Ciencias
- Departamento de Química
- Laboratorio de Cristalografía
- Mérida 5251
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Hu FL, Shi YX, Chen HH, Lang JP. A Zn(ii) coordination polymer and its photocycloaddition product: syntheses, structures, selective luminescence sensing of iron(iii) ions and selective absorption of dyes. Dalton Trans 2015; 44:18795-803. [DOI: 10.1039/c5dt03094c] [Citation(s) in RCA: 152] [Impact Index Per Article: 16.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Nanospheres of a Zn(ii) complex are used to selectively sense iron(iii) ions while its photocycloaddition product can selectively absorb dyes.
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Affiliation(s)
- Fei-long Hu
- College of Chemistry
- Chemical Engineering and Materials Science
- Soochow University
- Suzhou 215123
- P. R. China
| | - Yi-Xiang Shi
- College of Chemistry
- Chemical Engineering and Materials Science
- Soochow University
- Suzhou 215123
- P. R. China
| | - Huan-Huan Chen
- College of Chemistry
- Chemical Engineering and Materials Science
- Soochow University
- Suzhou 215123
- P. R. China
| | - Jian-Ping Lang
- College of Chemistry
- Chemical Engineering and Materials Science
- Soochow University
- Suzhou 215123
- P. R. China
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Bello L, Quintero M, Mora AJ, González T, Escalona A, Añez R, Ávila EE, Briceño A. Study of temperature and ligand flexibility effects on coordination polymer formation from cyclobutanetetracarboxylic acid. CrystEngComm 2015. [DOI: 10.1039/c5ce00646e] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Three novel coordination polymers (CPs) from rctt-H4Cbtc and 4,4’-bpe with Zn and Ni metal nodes have been synthesized. The CP derivates of Zn are an unusual example for the preparation of metastable phases involving temperature dependent and concomitant transformation.
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Affiliation(s)
- Lizaira Bello
- Laboratorio de Síntesis y Caracterización de Nuevos Materiales
- Centro de Química
- Instituto Venezolano de Investigaciones Científicas
- San Antonio de Los Altos, Venezuela
| | - Marilyn Quintero
- Laboratorio de Síntesis y Caracterización de Nuevos Materiales
- Centro de Química
- Instituto Venezolano de Investigaciones Científicas
- San Antonio de Los Altos, Venezuela
- Laboratorio de Cristalografía
| | - Asiloé J. Mora
- Laboratorio de Cristalografía
- Departamento de Química
- Facultad de Ciencias
- Mérida, Venezuela
| | - Teresa González
- Laboratorio de Síntesis y Caracterización de Nuevos Materiales
- Centro de Química
- Instituto Venezolano de Investigaciones Científicas
- San Antonio de Los Altos, Venezuela
| | - Ana Escalona
- Laboratorio de Síntesis y Caracterización de Nuevos Materiales
- Centro de Química
- Instituto Venezolano de Investigaciones Científicas
- San Antonio de Los Altos, Venezuela
| | - Rafael Añez
- Laboratorio de Química Computacional
- Centro de Química
- Instituto Venezolano de Investigaciones Científicas
- San Antonio de Los Altos, Venezuela
| | - Edward E. Ávila
- Laboratorio de Síntesis y Caracterización de Nuevos Materiales
- Centro de Química
- Instituto Venezolano de Investigaciones Científicas
- San Antonio de Los Altos, Venezuela
| | - Alexander Briceño
- Laboratorio de Síntesis y Caracterización de Nuevos Materiales
- Centro de Química
- Instituto Venezolano de Investigaciones Científicas
- San Antonio de Los Altos, Venezuela
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Chanthapally A, Yang H, Quah HS, Webster RD, Schreyer MK, Wong MW, Vittal JJ. Oxygen-initiated stereoselective thermal isomerisation of a cyclobutane derivative in the solid state. Chemistry 2014; 20:15702-8. [PMID: 25336351 DOI: 10.1002/chem.201405228] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2014] [Indexed: 11/11/2022]
Abstract
Solid-state [2+2] photochemical cycloaddition reactions have been extensively studied after the classical work of Schmidt in the 1960s. Of these, trans-1,2-bis(4'-pyridyl)ethylene (bpe) is one of the well-studied alkenes to synthesize tetrakis(4-pyridyl)cyclobutane (tpcb). However, almost all the solid-state [2+2] cycloaddition reactions of bpe yielded, almost exclusively, one of the four possible isomers, namely, the rctt-tpcb (r=regio c=cis and t=trans). Here we describe a stereoselective synthesis of the tetrahedrally disposed rtct-tpcb by the solid-state thermal isomerization of the rctt-isomer in atmospheric air. We propose that this isomerization occurs through a topochemical unimolecular mechanism by a radical chain pathway, initiated by molecular oxygen. This is supported by the nature of products formed in air and nitrogen, detection of a radical in ESR spectral studies, ESI-MS crossover experiments, VT PXRD studies along with QM, MD and docking calculations. The formation of a unique isomer by thermal isomerization may be a general phenomenon to quantitatively synthesize other useful stereoisomers from the existing isomers of cyclobutane derivatives.
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Affiliation(s)
- Anjana Chanthapally
- Department of Chemistry, National University of Singapore, Fax: (+65) 6779-1691
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12
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[2+2] Photodimerization of bispyridylethylenes by a controlled shift of the protonation equilibrium. Tetrahedron Lett 2013. [DOI: 10.1016/j.tetlet.2013.05.075] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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13
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Kole GK, Peedikakkal AMP, Toh BMF, Vittal JJ. Solid-State Structural Transformations and Photoreactivity of 1D-Ladder Coordination Polymers of PbII. Chemistry 2013; 19:3962-8. [DOI: 10.1002/chem.201203678] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2012] [Indexed: 11/11/2022]
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14
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Bhattacharya S, Stojaković J, Saha BK, MacGillivray LR. A Product of a Templated Solid-State Photodimerization Acts as a Template: Single-Crystal Reactivity in a Single Polymorph of a Cocrystal. Org Lett 2013; 15:744-7. [DOI: 10.1021/ol303283s] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Affiliation(s)
- Suman Bhattacharya
- Department of Chemistry, Pondicherry University, Puducherry 605 014, India, and Department of Chemistry, University of Iowa, 305 Chemistry Building, Iowa City, Iowa 52242, United States
| | - Jelena Stojaković
- Department of Chemistry, Pondicherry University, Puducherry 605 014, India, and Department of Chemistry, University of Iowa, 305 Chemistry Building, Iowa City, Iowa 52242, United States
| | - Binoy K. Saha
- Department of Chemistry, Pondicherry University, Puducherry 605 014, India, and Department of Chemistry, University of Iowa, 305 Chemistry Building, Iowa City, Iowa 52242, United States
| | - Leonard R. MacGillivray
- Department of Chemistry, Pondicherry University, Puducherry 605 014, India, and Department of Chemistry, University of Iowa, 305 Chemistry Building, Iowa City, Iowa 52242, United States
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Briceño A, Leal D, Ortega G, Delgado GDD, Ocando E, Cubillan L. Self-assembly, concomitant photochemical processes, and improvement of the yield of [2 + 2] photoreactions from supramolecular arrays via mechanochemical assistance. CrystEngComm 2013. [DOI: 10.1039/c3ce26752k] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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16
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Urdaneta N, Nuñez J, González T, Briceño A. 1-[5-(4,5-Dimethyl-1,3,2-dioxaborolan-2-yl)thiophen-2-yl]ethanone and 4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)benzaldehyde. Acta Crystallogr C 2012; 68:o213-5. [DOI: 10.1107/s0108270112018598] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2012] [Accepted: 04/25/2012] [Indexed: 11/11/2022] Open
Abstract
In both title compounds, C10H13BO3S, (I), and C13H17BO3, (II), the molecules adopt nearly planar conformations. The crystal packing of (I) consists of a supramolecular two-dimensional network with a herringbone-like topology formed by self assembly of centrosymmetric pairs of molecules linkedviadipole–dipole interactions. The crystal structure of (II) consists of a supramolecular two-dimensional network built up from centrosymmetric pairs of moleculesviaπ–π interactions. These pairs of molecules are self-organized in an offset fashion related by a symmetry centre, generating supramolecular ribbons running along the [101] direction. Neighbouring ribbons are stackedviacomplementary van der Waals and hydrophobic methyl–methyl interactions.
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Kole GK, Tan GK, Vittal JJ. Solid state photodimerization of trans-2-(4-pyridyl)-4-vinylbenzoic acid via salt formation and isomerisation of cyclobutane compounds in solution. CrystEngComm 2012. [DOI: 10.1039/c2ce26086g] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Briceño A, Hill Y. Exploring the use of anionic homoleptic complexes as templates in the design of photoreactive multi-component supramolecular assemblies. CrystEngComm 2012. [DOI: 10.1039/c2ce25481f] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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