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Francisco KR, Ballatore C. Thietanes and derivatives thereof in medicinal chemistry. Curr Top Med Chem 2022; 22:1219-1234. [PMID: 35546768 DOI: 10.2174/1568026622666220511154228] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2022] [Revised: 03/04/2022] [Accepted: 03/13/2022] [Indexed: 11/22/2022]
Abstract
Unlike the oxetane ring, which, as evidenced by numerous studies, is known to play an increasingly important role in medicinal chemistry, the thietane ring has thus far received comparatively limited attention. Nonetheless, a growing number of reports now indicate that this 4-membered ring heterocycle may provide opportunities in analog design. In the present review article, we discuss the possible use and utility of the thietane fragment in medicinal chemistry and provide an overview of its properties and recent applications with a focus on isosteric replacements.
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Affiliation(s)
- Karol R Francisco
- Department of Chemistry & Biochemistry, University of California San Diego, 9500 Gilman Drive, La Jolla, CA, 92093, USA
| | - Carlo Ballatore
- Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA
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Chen H, Xiao Y, Yuan N, Weng J, Gao P, Breindel L, Shekhtman A, Zhang Q. Coupling of sterically demanding peptides by β-thiolactone-mediated native chemical ligation. Chem Sci 2018; 9:1982-1988. [PMID: 29675245 PMCID: PMC5892351 DOI: 10.1039/c7sc04744d] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2017] [Accepted: 01/02/2018] [Indexed: 12/30/2022] Open
Abstract
The ligation of sterically demanding peptidyl sites such as those involving Val-Val and Val-Pro linkages has proven to be extremely challenging with conventional NCL methods that rely on exogenous thiol additives. Herein, we report an efficient β-thiolactone-mediated additive-free NCL protocol that enables the establishment of these connections in good yield. The rapid NCL was followed by in situ desulfurization. Reaction rates between β-thiolactones and conventional thioesters towards NCL were also investigated, and direct aminolysis was ruled out as a possible pathway. Finally, the potent cytotoxic cyclic-peptide axinastatin 1 has been prepared using the developed methodology.
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Affiliation(s)
- Huan Chen
- Department of Chemistry , University at Albany , State University of New York , 1400 Washington Avenue , Albany , NY 12222 , USA .
| | - Yunxian Xiao
- Department of Chemistry , University at Albany , State University of New York , 1400 Washington Avenue , Albany , NY 12222 , USA .
| | - Ning Yuan
- State Key Laboratory of Natural and Biomimetic Drugs , School of Pharmaceutical Sciences , Peking University , 38 Xueyuan Road , Beijing 100191 , China
| | - Jiaping Weng
- Department of Chemistry , University at Albany , State University of New York , 1400 Washington Avenue , Albany , NY 12222 , USA .
| | - Pengcheng Gao
- Department of Chemistry , University at Albany , State University of New York , 1400 Washington Avenue , Albany , NY 12222 , USA .
| | - Leonard Breindel
- Department of Chemistry , University at Albany , State University of New York , 1400 Washington Avenue , Albany , NY 12222 , USA
| | - Alexander Shekhtman
- Department of Chemistry , University at Albany , State University of New York , 1400 Washington Avenue , Albany , NY 12222 , USA
| | - Qiang Zhang
- Department of Chemistry , University at Albany , State University of New York , 1400 Washington Avenue , Albany , NY 12222 , USA .
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Malapit CA, Caldwell DR, Sassu N, Milbin S, Howell AR. Pd-Catalyzed Acyl C-O Bond Activation for Selective Ring-Opening of α-Methylene-β-lactones with Amines. Org Lett 2017; 19:1966-1969. [PMID: 28375015 PMCID: PMC5839468 DOI: 10.1021/acs.orglett.7b00494] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
A Pd-catalyzed ring-opening of β-lactones with various types of amines (primary, secondary, and aryl) to provide β-hydroxy amides with excellent selectivity toward acyl C-O bond cleavage is reported. The utility of this protocol is demonstrated in an asymmetric kinetic resolution providing enantioenriched α-methylene-β-lactones.
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Affiliation(s)
- Christian A. Malapit
- Department of Chemistry, University of Connecticut, Storrs, Connecticut 06269-3060 United States
| | - Donald R. Caldwell
- Department of Chemistry, University of Connecticut, Storrs, Connecticut 06269-3060 United States
| | - Nicole Sassu
- Department of Chemistry, University of Connecticut, Storrs, Connecticut 06269-3060 United States
| | - Samuel Milbin
- Department of Chemistry, University of Connecticut, Storrs, Connecticut 06269-3060 United States
| | - Amy R. Howell
- Department of Chemistry, University of Connecticut, Storrs, Connecticut 06269-3060 United States
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Suzuki M, Makimura K, Matsuoka SI. Thiol-Mediated Controlled Ring-Opening Polymerization of Cysteine-Derived β-Thiolactone and Unique Features of Product Polythioester. Biomacromolecules 2016; 17:1135-41. [DOI: 10.1021/acs.biomac.5b01748] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Affiliation(s)
- Masato Suzuki
- Department of Materials Science
and Engineering, Nagoya Institute of Technology, Nagoya 466-8555, Japan
| | - Kazumasa Makimura
- Department of Materials Science
and Engineering, Nagoya Institute of Technology, Nagoya 466-8555, Japan
| | - Shin-ichi Matsuoka
- Department of Materials Science
and Engineering, Nagoya Institute of Technology, Nagoya 466-8555, Japan
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Wiedemann EN, Mandl FA, Blank ID, Ochsenfeld C, Ofial AR, Sieber SA. Kinetic and Theoretical Studies of Beta-Lactone Reactivity-A Quantitative Scale for Biological Application. Chempluschem 2015; 80:1673-1679. [PMID: 31973367 DOI: 10.1002/cplu.201500246] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2015] [Indexed: 11/08/2022]
Abstract
Natural products comprise a rich source for bioactive molecules with medicinal relevance. Many of these contain electrophilic scaffolds that bind conserved enzyme active sites covalently. Prominent examples include beta-lactams and beta-lactones, which specifically acylate serine residues in diverse peptidases. Although these scaffolds appear similar, their bioactivities and corresponding protein targets vary. To quantify and dissect these differences in bioactivities, the kinetics of the reactions of beta-butyrolactone with a set of reference amines in buffered aqueous solution at 37 °C have been analyzed. Different product ratios of C1 versus C3 attack on the beta-butyrolactone have been observed, depending on the aliphatic or aromatic nature of the standard amine used. Quantum mechanics/molecular mechanics (QM/MM) calculations reveal that a H3 O+ molecule has a crucial role in stabilizing C3 attack by aniline, through coordination of the lactone ring oxygen. In agreement with their weak proteome reactivity, monocyclic beta-lactams did not react with the set of standard nucleophiles studied herein. Bicyclic beta-lactams, however, exhibited a lower activation barrier, and thus, reacted with standard nucleophiles. This study represents a starting point for semiquantitative reactivity scales for natural products, which, in analogy to chemical reactivity scales, will provide predictions for electrophilic modifications in biological systems.
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Affiliation(s)
- Elija N Wiedemann
- Department Chemie, Ludwig-Maximilians-Universität München, Butenandtstrasse 5-13, 81377, München, Germany
| | - Franziska A Mandl
- Center for Integrated Protein Science CIPSM, Institute of Advanced Studies IAS, Department Chemie, Lehrstuhl für Organische Chemie II, Technische Universität München, Lichtenbergstrasse 4, 85748, Garching, Germany
| | - Iris D Blank
- Department Chemie, Ludwig-Maximilians-Universität München, Butenandtstrasse 5-13, 81377, München, Germany
| | - Christian Ochsenfeld
- Department Chemie, Ludwig-Maximilians-Universität München, Butenandtstrasse 5-13, 81377, München, Germany
| | - Armin R Ofial
- Department Chemie, Ludwig-Maximilians-Universität München, Butenandtstrasse 5-13, 81377, München, Germany
| | - Stephan A Sieber
- Center for Integrated Protein Science CIPSM, Institute of Advanced Studies IAS, Department Chemie, Lehrstuhl für Organische Chemie II, Technische Universität München, Lichtenbergstrasse 4, 85748, Garching, Germany
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Noel A, Delpech B, Crich D. Chemistry of the β-thiolactones: substituent and solvent effects on thermal decomposition and comparison with the β-lactones. J Org Chem 2014; 79:4068-77. [PMID: 24716459 DOI: 10.1021/jo500577c] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
The synthesis of a series of di-, tri-, and tetraalkyl β-thiolactones and β-lactones is described as well as their thermal decomposition with extrusion of carbon oxysulfide and carbon dioxide in two solvents of opposite polarities. The β-thiolactones are considerably more thermally stable than the β-lactones and require higher temperatures for efficient decomposition in both solvents, whatever the degree of substitution. The results are interpreted in terms of a zwitterionic mechanism for fragmentation with a change in the rate-determining step between the two series.
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Affiliation(s)
- Amandine Noel
- Centre de Recherche de Gif, Institut de Chimie des Substances Naturelles, CNRS , Avenue de la Terrasse, 91190 Gif-sur-Yvette, France
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Orr D, Tolfrey A, Percy JM, Frieman J, Harrison ZA, Campbell-Crawford M, Patel VK. Single-Step Microwave-Mediated Synthesis of Oxazoles and Thiazoles from 3-Oxetanone: A Synthetic and Computational Study. Chemistry 2013; 19:9655-62. [DOI: 10.1002/chem.201301011] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2013] [Indexed: 11/07/2022]
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Affiliation(s)
- Amandine Noel
- a Centre de Recherche de Gif, Institut de Chimie des Substances Naturelles, CNRS , Avenue de la Terrasse, 91190 , Gif-Sur-Yvette , France
| | - Bernard Delpech
- a Centre de Recherche de Gif, Institut de Chimie des Substances Naturelles, CNRS , Avenue de la Terrasse, 91190 , Gif-Sur-Yvette , France
| | - David Crich
- a Centre de Recherche de Gif, Institut de Chimie des Substances Naturelles, CNRS , Avenue de la Terrasse, 91190 , Gif-Sur-Yvette , France
- b Department of Chemistry , Wayne State University , 5101 Cass Avenue, Detroit , MI , 48202 , USA
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