1
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Shinde DR, Rama Krishna G, Marelli UK. Metal-Free One-Pot Domino Synthesis of Oxazolidinethione Derivatives of Quaternary Amino Acids from α-Amino Esters and Aldehydes Using CS 2. J Org Chem 2024; 89:7109-7114. [PMID: 38319673 DOI: 10.1021/acs.joc.3c02217] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2024]
Abstract
We present a streamlined, metal-free, one-pot domino approach to efficiently synthesize oxazolidinethione derivatives containing substituted quaternary amino acids. This method employs α-amino esters, aldehydes, and CS2 under mild conditions, constructing three new bonds (C-N, C-C, and C-O) to produce oxazolidinethione compounds featuring a quaternary center and a beta-hydroxy derivative in high yields. This scalable protocol enables the creation of libraries of biologically significant, intricate amino acid derivatives using amino esters and aldehydes.
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Affiliation(s)
- Dinesh R Shinde
- Division of Organic Chemistry, CSIR-National Chemical Laboratory, Dr. Homi Bhabha Road, 411008 Pune, India
- Central NMR Facility, CSIR-National Chemical Laboratory, Dr. Homi Bhabha Road, 411008 Pune, India
- Academy of Scientific and Innovative Research (AcSIR), CSIR-HRDC Campus, Sector 19, Kamla Nehru Nagar, Ghaziabad 201002, UP, India
| | - Gamidi Rama Krishna
- X-ray Crystallography, CSIR-National Chemical Laboratory, Dr. Homi Bhabha Road, 411008 Pune, India
| | - Udaya Kiran Marelli
- Division of Organic Chemistry, CSIR-National Chemical Laboratory, Dr. Homi Bhabha Road, 411008 Pune, India
- Central NMR Facility, CSIR-National Chemical Laboratory, Dr. Homi Bhabha Road, 411008 Pune, India
- Academy of Scientific and Innovative Research (AcSIR), CSIR-HRDC Campus, Sector 19, Kamla Nehru Nagar, Ghaziabad 201002, UP, India
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2
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Tatsumi T, Sasamoto K, Matsumoto T, Hirano R, Oikawa K, Nakano M, Yoshida M, Oisaki K, Kanai M. Practical N-to-C peptide synthesis with minimal protecting groups. Commun Chem 2023; 6:231. [PMID: 37884638 PMCID: PMC10603086 DOI: 10.1038/s42004-023-01030-0] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2023] [Accepted: 10/13/2023] [Indexed: 10/28/2023] Open
Abstract
Accessible drug modalities have continued to increase in number in recent years. Peptides play a central role as pharmaceuticals and biomaterials in these new drug modalities. Although traditional peptide synthesis using chain-elongation from C- to N-terminus is reliable, it produces large quantities of chemical waste derived from protecting groups and condensation reagents, which place a heavy burden on the environment. Here we report an alternative N-to-C elongation strategy utilizing catalytic peptide thioacid formation and oxidative peptide bond formation with main chain-unprotected amino acids under aerobic conditions. This method is applicable to both iterative peptide couplings and convergent fragment couplings without requiring elaborate condensation reagents and protecting group manipulations. A recyclable N-hydroxy pyridone additive effectively suppresses epimerization at the elongating chain. We demonstrate the practicality of this method by showcasing a straightforward synthesis of the nonapeptide DSIP. This method further opens the door to clean and atom-efficient peptide synthesis.
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Affiliation(s)
- Toshifumi Tatsumi
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan
| | - Koki Sasamoto
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan
| | - Takuya Matsumoto
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan
| | - Ryo Hirano
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan
| | - Kazuki Oikawa
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan
| | - Masato Nakano
- Interdisciplinary Research Center for Catalytic Chemistry (IRC3), National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba Central 5-2, 1-1-1 Higashi, Tsukuba, Ibaraki, 305-8565, Japan
| | - Masaru Yoshida
- Interdisciplinary Research Center for Catalytic Chemistry (IRC3), National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba Central 5-2, 1-1-1 Higashi, Tsukuba, Ibaraki, 305-8565, Japan
| | - Kounosuke Oisaki
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan.
- Interdisciplinary Research Center for Catalytic Chemistry (IRC3), National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba Central 5-2, 1-1-1 Higashi, Tsukuba, Ibaraki, 305-8565, Japan.
| | - Motomu Kanai
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan.
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3
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Tosi E, Campagne JM, de Figueiredo RM. Amine Activation: "Inverse" Dipeptide Synthesis and Amide Function Formation through Activated Amino Compounds. J Org Chem 2022; 87:12148-12163. [PMID: 36069394 DOI: 10.1021/acs.joc.2c01288] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A copper(II)/HOBt-catalyzed procedure for the synthesis of dipeptides and "general" amides has been developed using microwave irradiation to considerably hasten the reaction. As an alternative to using traditional carboxylic acid activation, the method relies on the use of N-acyl imidazoles as activated amino partners. By doing so, a nonconventional way to reach dipeptides and amides has been proposed through the challenging and less studied N → C direction synthesis. A series of dipeptides and "general" amides have been successfully synthesized, and the applicability of the method has been illustrated in gram-scale syntheses. The mild reaction conditions proposed are completely adequate for couplings in the presence of sensitive amino acids, affording the products without detectable racemization. Furthermore, experimental observations prompted us to propose a plausible reaction pathway for the couplings.
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Affiliation(s)
- Eleonora Tosi
- ICGM, Univ Montpellier, CNRS, ENSCM, Montpellier 34293, France
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4
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Wang H, Li Y, Liu S, Makha M, Bai JF, Li Y. CO 2 -Promoted Direct Acylation of Amines and Phenols by the Activation of Inert Thioacid Salts. CHEMSUSCHEM 2022; 15:e202200227. [PMID: 35289483 DOI: 10.1002/cssc.202200227] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/30/2022] [Revised: 03/15/2022] [Indexed: 06/14/2023]
Abstract
Herein a carbon dioxide-promoted synthetic approach for the direct amidation between unactivated thioacid salts and amines under mild conditions was developed for a wide range of substrates. The method afforded amides in good to excellent yields under transition-metal-free and activation-reagent-free conditions, in sharp contrast to early methodologies on amide synthesis based on transition-metal catalysis. The method offered a greener and transition metal-free protocol applicable to pharmaceuticals preparations. Phenolic compounds were also found to be suitable acylation substrates with potassium thiosulfide KHS as the only byproduct. Moreover, this approach was applied to amide synthesis of valuable bio-active molecules such as moclobemide, melatonin, and a fungicide. Insights into the reaction mechanism involving carbon dioxide were provided through NMR spectroscopy and computational calculations. A plausible mechanism was proposed that involves weak interactions between carbon dioxide and potassium thioacetate in a dynamic equilibrium state formation of a six-membered ring.
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Affiliation(s)
- Huan Wang
- State Key Laboratory for Oxo Synthesis and Selective Oxidation, Suzhou Research Institute of LICP Lanzhou Institute of Chemical Physics (LICP) Chinese Academy of Sciences, Lanzhou, 730000, P. R. China
- University of Chinese Academy of Sciences, Beijing, 100049, P. R. China
| | - Yudong Li
- State Key Laboratory for Oxo Synthesis and Selective Oxidation, Suzhou Research Institute of LICP Lanzhou Institute of Chemical Physics (LICP) Chinese Academy of Sciences, Lanzhou, 730000, P. R. China
| | - Shaoli Liu
- College of Chemistry and Chemical Engineering Yantai University, Yantai, 264005, P. R. China
| | - Mohamed Makha
- State Key Laboratory for Oxo Synthesis and Selective Oxidation, Suzhou Research Institute of LICP Lanzhou Institute of Chemical Physics (LICP) Chinese Academy of Sciences, Lanzhou, 730000, P. R. China
| | - Jian-Fei Bai
- State Key Laboratory for Oxo Synthesis and Selective Oxidation, Suzhou Research Institute of LICP Lanzhou Institute of Chemical Physics (LICP) Chinese Academy of Sciences, Lanzhou, 730000, P. R. China
| | - Yuehui Li
- State Key Laboratory for Oxo Synthesis and Selective Oxidation, Suzhou Research Institute of LICP Lanzhou Institute of Chemical Physics (LICP) Chinese Academy of Sciences, Lanzhou, 730000, P. R. China
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5
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Nomura K, Maki Y, Okamoto R, Satoh A, Kajihara Y. Glycoprotein Semisynthesis by Chemical Insertion of Glycosyl Asparagine Using a Bifunctional Thioacid-Mediated Strategy. J Am Chem Soc 2021; 143:10157-10167. [PMID: 34189908 DOI: 10.1021/jacs.1c02601] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Glycosylation is a major modification of secreted and cell surface proteins, and the resultant glycans show considerable heterogeneity in their structures. To understand the biological processes arising from each glycoform, the preparation of homogeneous glycoproteins is essential for extensive biological experiments. To establish a more robust and rapid synthetic route for the synthesis of homogeneous glycoproteins, we studied several key reactions based on amino thioacids. We found that diacyl disulfide coupling (DDC) formed with glycosyl asparagine thioacid and peptide thioacid yielded glycopeptides. This efficient coupling reaction enabled us to develop a new glycoprotein synthesis method, such as the bifunctional thioacid-mediated strategy, which can couple two peptides with the N- and C-termini of glycosyl asparagine thioacid. Previous glycoprotein synthesis methods required valuable glycosyl asparagine in the early stage and subsequent multiple glycoprotein synthesis routes, whereas the developed concept can generate glycoproteins within a few steps from peptide and glycosyl asparagine thioacid. Herein, we report the characterization of the DDC of amino thioacids and the efficient ability of glycosyl asparagine thioacid to be used for robust glycoprotein semisynthesis.
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Affiliation(s)
| | | | | | - Ayano Satoh
- Graduate School of Interdisciplinary Science and Engineering in Health Systems, Okayama University, 3-1-1, Tsushimanaka, Okayama 700-0082, Japan
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6
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Koshizuka M, Makino K, Shimada N. Diboronic Acid Anhydride-Catalyzed Direct Peptide Bond Formation Enabled by Hydroxy-Directed Dehydrative Condensation. Org Lett 2020; 22:8658-8664. [PMID: 33044828 DOI: 10.1021/acs.orglett.0c03252] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
We report the catalytic direct peptide bond formations via dehydrative condensation of β-hydroxy-α-amino acids, affording the serine, threonine, or β-hydroxyvaline-derived peptides in high to excellent yields with high functional group tolerance, minimum epimerization, and excellent chemoselectivity. The key to the success of these atom-economical transformations is the use of diboronic acid anhydride catalyst for the hydroxy-directed reactions.
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Affiliation(s)
- Masayoshi Koshizuka
- Laboratory of Organic Chemistry for Drug Development and Medical Research Laboratories, Department of Pharmaceutical Sciences, Kitasato University, Tokyo 108-8641, Japan
| | - Kazuishi Makino
- Laboratory of Organic Chemistry for Drug Development and Medical Research Laboratories, Department of Pharmaceutical Sciences, Kitasato University, Tokyo 108-8641, Japan
| | - Naoyuki Shimada
- Laboratory of Organic Chemistry for Drug Development and Medical Research Laboratories, Department of Pharmaceutical Sciences, Kitasato University, Tokyo 108-8641, Japan
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7
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Hollanders C, Renders E, Gadais C, Masullo D, Van Raemdonck L, Wybon CCD, Martin C, Herrebout WA, Maes BUW, Ballet S. Zn-Catalyzed Nicotinate-Directed Transamidations in Peptide Synthesis. ACS Catal 2020. [DOI: 10.1021/acscatal.9b05074] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Charlie Hollanders
- Organic Chemistry, Departments of Chemistry and Bioengineering Sciences, Vrije Universiteit Brussel, Pleinlaan 2, B-1050 Brussels, Belgium
- Organic Synthesis, Department of Chemistry, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp, Belgium
| | - Evelien Renders
- Organic Synthesis, Department of Chemistry, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp, Belgium
| | - Charlène Gadais
- Organic Chemistry, Departments of Chemistry and Bioengineering Sciences, Vrije Universiteit Brussel, Pleinlaan 2, B-1050 Brussels, Belgium
- Organic Synthesis, Department of Chemistry, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp, Belgium
| | - Dario Masullo
- Organic Synthesis, Department of Chemistry, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp, Belgium
| | - Laurent Van Raemdonck
- Organic Synthesis, Department of Chemistry, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp, Belgium
| | - Clarence C. D. Wybon
- Organic Synthesis, Department of Chemistry, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp, Belgium
| | - Charlotte Martin
- Organic Chemistry, Departments of Chemistry and Bioengineering Sciences, Vrije Universiteit Brussel, Pleinlaan 2, B-1050 Brussels, Belgium
| | - Wouter A. Herrebout
- Molecular Spectroscopy, Department of Chemistry, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp, Belgium
| | - Bert U. W. Maes
- Organic Synthesis, Department of Chemistry, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp, Belgium
| | - Steven Ballet
- Organic Chemistry, Departments of Chemistry and Bioengineering Sciences, Vrije Universiteit Brussel, Pleinlaan 2, B-1050 Brussels, Belgium
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8
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Abdolmaleki S, Ghadermazi M, Bagheri F, Amiri Rudbari H, Bruno G. Evaluation of two novel macrocycles containing pyridine-2,6-dicarboxamide unit as cationic fluorescent sensor. Polyhedron 2020. [DOI: 10.1016/j.poly.2019.114292] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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9
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Yu P, Wang Y, Zeng Z, Chen Y. Metal-Free C-N or C-C Bond Cleavages of α-Azido Ketones: An Oxidative-Amidation Strategy for the Synthesis of α-Ketothioamides and Amides. J Org Chem 2019; 84:14883-14891. [PMID: 31608627 DOI: 10.1021/acs.joc.9b01777] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
A novel metal-free oxidative-amidation strategy for the synthesis of α-ketothioamides and amides from α-azido ketones was developed. The C-H bond thionation of α-azido ketones with elemental sulfur could form α-ketothioacyl azide, which was then nucleophilically attacked by amines, causing the cleavage of the C-N bond to afford α-ketothioamides, while amides could be formed with the release of nitrogen gas and cyano anion in the presence of PhI(OAc)2 by selective C-C bond cleavage.
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Affiliation(s)
- Pei Yu
- School of Chemistry and Environmental Engineering , Wuhan Institute of Technology , Wuhan 430073 , China
| | - Yuwei Wang
- School of Chemistry and Environmental Engineering , Wuhan Institute of Technology , Wuhan 430073 , China
| | - Zhigang Zeng
- School of Nuclear Technology and Chemistry & Biology , Hubei University of Science and Technology , Xianning 437100 , China
| | - Yunfeng Chen
- School of Chemistry and Environmental Engineering , Wuhan Institute of Technology , Wuhan 430073 , China
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10
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Tang L, Matuska JH, Huang YH, He YH, Guan Z. Amide Synthesis from Thiocarboxylic Acids and Amines by Spontaneous Reaction and Electrosynthesis. CHEMSUSCHEM 2019; 12:2570-2575. [PMID: 30994975 DOI: 10.1002/cssc.201900814] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2019] [Revised: 04/16/2019] [Indexed: 06/09/2023]
Abstract
Amide bond formation is one of the most important basic reactions in chemistry. A catalyst-free approach for constructing amide bonds from thiocarboxylic acids and amines was developed. The mechanistic studies showed that the disulfide was the key intermediate for this amide synthesis. Thiobenzoic acids could be automatically oxidized to disulfides in air, thioaliphatic acids could be electro-oxidized to disulfides, and the resulting disulfides reacted with amines to give the corresponding amides. By this method, various amides could be easily synthesized in excellent yields without using any catalyst or activator. The successful synthesis of bioactive compounds also highlights the synthetic utility of this strategy in medicinal chemistry.
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Affiliation(s)
- Li Tang
- Key Laboratory of Applied Chemistry of Chongqing Municipality, School of Chemistry and Chemical Engineering, Southwest University, Chongqing, 400715, P.R. China
| | - Jack H Matuska
- Department of Chemistry, College of Saint Benedict and Saint John's University, Collegeville, MN, 56321, USA
| | - Yu-Han Huang
- Key Laboratory of Applied Chemistry of Chongqing Municipality, School of Chemistry and Chemical Engineering, Southwest University, Chongqing, 400715, P.R. China
| | - Yan-Hong He
- Key Laboratory of Applied Chemistry of Chongqing Municipality, School of Chemistry and Chemical Engineering, Southwest University, Chongqing, 400715, P.R. China
| | - Zhi Guan
- Key Laboratory of Applied Chemistry of Chongqing Municipality, School of Chemistry and Chemical Engineering, Southwest University, Chongqing, 400715, P.R. China
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11
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Roopesh Kumar L, Panduranga V, Vishwanatha TM, Shekharappa, Sureshbabu VV. Synthesis of thioureido peptidomimetics employing alkyl azides and dithiocarbamates. Org Biomol Chem 2019. [PMID: 29528353 DOI: 10.1039/c8ob00239h] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
An unprecedented approach for the assembly of thioureido peptidomimetics is developed employing alkyl azides and dithiocarbamates. Dithiocarbamates react with alkyl azides with the liberation of N2 and elemental sulfur thereby leading to thiourea in a traceless manner. Thioureido peptidomimetics are thus furnished in good yields with no epimerization. This process is mild, free from the use of a base, scalable and step economic. The practicability of this methodology has been highlighted by the synthesis of N,N'-orthogonally protected thioureido peptidomimetics.
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Affiliation(s)
- L Roopesh Kumar
- Room No. 109, Peptide Research Laboratory, Department of Studies in Chemistry, Central College Campus, Dr. B. R. Ambedkar Veedhi, Bangalore University, Bangalore, 560001, India.
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12
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Jiang YY, Liu TT, Zhang RX, Xu ZY, Sun X, Bi S. Mechanism and Rate-Determining Factors of Amide Bond Formation through Acyl Transfer of Mixed Carboxylic–Carbamic Anhydrides: A Computational Study. J Org Chem 2018; 83:2676-2685. [DOI: 10.1021/acs.joc.7b03107] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Yuan-Ye Jiang
- School of Chemistry and Chemical Engineering, Qufu Normal University, Qufu 273165, People’s Republic of China
| | - Tian-Tian Liu
- School of Chemistry and Chemical Engineering, Qufu Normal University, Qufu 273165, People’s Republic of China
| | - Rui-Xue Zhang
- School of Chemistry and Chemical Engineering, Qufu Normal University, Qufu 273165, People’s Republic of China
| | - Zhong-Yan Xu
- School of Chemistry and Chemical Engineering, Qufu Normal University, Qufu 273165, People’s Republic of China
| | - Xue Sun
- School of Chemistry and Chemical Engineering, Qufu Normal University, Qufu 273165, People’s Republic of China
| | - Siwei Bi
- School of Chemistry and Chemical Engineering, Qufu Normal University, Qufu 273165, People’s Republic of China
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13
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Jiang YY, Liu TT, Sun X, Xu ZY, Fan X, Zhu L, Bi S. Computational study of the mechanism of amide bond formation via CS2-releasing 1,3-acyl transfer. Org Biomol Chem 2018; 16:5808-5815. [DOI: 10.1039/c8ob01338a] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
A systematic computational study on CS2-releasing 1,3-acyl transfer was performed for the first time and provided deeper mechanistic insights.
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Affiliation(s)
- Yuan-Ye Jiang
- School of Chemistry and Chemical Engineering
- Qufu Normal University
- Qufu 273165
- People's Republic of China
| | - Tian-Tian Liu
- School of Chemistry and Chemical Engineering
- Qufu Normal University
- Qufu 273165
- People's Republic of China
| | - Xue Sun
- School of Chemistry and Chemical Engineering
- Qufu Normal University
- Qufu 273165
- People's Republic of China
| | - Zhong-Yan Xu
- School of Chemistry and Chemical Engineering
- Qufu Normal University
- Qufu 273165
- People's Republic of China
| | - Xia Fan
- School of Chemistry and Chemical Engineering
- Qufu Normal University
- Qufu 273165
- People's Republic of China
| | - Ling Zhu
- School of Chemistry and Chemical Engineering
- Qufu Normal University
- Qufu 273165
- People's Republic of China
| | - Siwei Bi
- School of Chemistry and Chemical Engineering
- Qufu Normal University
- Qufu 273165
- People's Republic of China
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14
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Matsumoto T, Sasamoto K, Hirano R, Oisaki K, Kanai M. A catalytic one-step synthesis of peptide thioacids: the synthesis of leuprorelin via iterative peptide–fragment coupling reactions. Chem Commun (Camb) 2018; 54:12222-12225. [DOI: 10.1039/c8cc07935h] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A catalytic one-step synthesis of peptide thioacids with suppressed epimerization was developed and applied to an iterative fragment coupling protocol.
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Affiliation(s)
- Takuya Matsumoto
- Graduate School of Pharmaceutical Sciences
- The University of Tokyo
- Tokyo 113-0033
- Japan
| | - Koki Sasamoto
- Graduate School of Pharmaceutical Sciences
- The University of Tokyo
- Tokyo 113-0033
- Japan
| | - Ryo Hirano
- Graduate School of Pharmaceutical Sciences
- The University of Tokyo
- Tokyo 113-0033
- Japan
| | - Kounosuke Oisaki
- Graduate School of Pharmaceutical Sciences
- The University of Tokyo
- Tokyo 113-0033
- Japan
| | - Motomu Kanai
- Graduate School of Pharmaceutical Sciences
- The University of Tokyo
- Tokyo 113-0033
- Japan
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15
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N. N, Thimmalapura VM, Hosamani B, Prabhu G, Kumar LR, Sureshbabu VV. Thioacids – synthons for amide bond formation and ligation reactions: assembly of peptides and peptidomimetics. Org Biomol Chem 2018; 16:3524-3552. [DOI: 10.1039/c8ob00512e] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The synthesis of α-amino thioacids and peptide thioacids and their applications in chemoselective amide bond formation, ligation of peptides/proteins/glycopeptides and synthesis of peptidomimetics are reviewed.
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Affiliation(s)
- Narendra N.
- Department of Chemistry
- University College of Science
- Tumkur University
- Tumkur 572 103
- India
| | - Vishwanatha M. Thimmalapura
- Room No. 109
- Peptide Research Laboratory
- Department of Studies in Chemistry
- Central College Campus
- Dr B. R. Ambedkar Veedhi
| | - Basavaprabhu Hosamani
- Room No. 109
- Peptide Research Laboratory
- Department of Studies in Chemistry
- Central College Campus
- Dr B. R. Ambedkar Veedhi
| | - Girish Prabhu
- Room No. 109
- Peptide Research Laboratory
- Department of Studies in Chemistry
- Central College Campus
- Dr B. R. Ambedkar Veedhi
| | - L. Roopesh Kumar
- Room No. 109
- Peptide Research Laboratory
- Department of Studies in Chemistry
- Central College Campus
- Dr B. R. Ambedkar Veedhi
| | - Vommina V. Sureshbabu
- Room No. 109
- Peptide Research Laboratory
- Department of Studies in Chemistry
- Central College Campus
- Dr B. R. Ambedkar Veedhi
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16
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Charron CL, Cottam Jones JM, Hutton CA. Are Aminomethyl Thioesters Viable Intermediates in Native Chemical Ligation Type Amide Bond Forming Reactions? Aust J Chem 2018. [DOI: 10.1071/ch18198] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
The condensation of N-mercaptomethyl amines and thioesters is a potential route to amides, via aminomethyl thioester intermediates, in a native chemical ligation type process followed by self-cleavage of the ‘mercaptomethyl’ auxiliary. This paper describes investigations towards the preparation of aminomethyl thioesters, and subsequent conversion into amides, from a three-component coupling of formaldehyde, a thioacid, and an amine. Our studies suggest that while such intermediates may be formed en route to amides, no advantages are offered over the direct reaction of the amine and thioacid precursors.
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17
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Yang J, Zhao J. Recent developments in peptide ligation independent of amino acid side-chain functional group. Sci China Chem 2017. [DOI: 10.1007/s11426-017-9056-5] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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18
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de Figueiredo RM, Suppo JS, Midrier C, Campagne JM. Sequential One-Pot Synthesis of Dipeptides through the Transient Formation of CDI-N
-Protected α-Aminoesters. Adv Synth Catal 2017. [DOI: 10.1002/adsc.201700034] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Renata Marcia de Figueiredo
- Institut Charles Gerhardt Montpellier; UMR 5253 CNRS-UM-ENSCM; Ecole Nationale Supérieure de Chimie de Montpellier; 8 Rue de l'Ecole Normale 34296 Montpellier Cedex 5 France
| | - Jean-Simon Suppo
- Institut Charles Gerhardt Montpellier; UMR 5253 CNRS-UM-ENSCM; Ecole Nationale Supérieure de Chimie de Montpellier; 8 Rue de l'Ecole Normale 34296 Montpellier Cedex 5 France
| | - Camille Midrier
- Institut Charles Gerhardt Montpellier; UMR 5253 CNRS-UM-ENSCM; Ecole Nationale Supérieure de Chimie de Montpellier; 8 Rue de l'Ecole Normale 34296 Montpellier Cedex 5 France
| | - Jean-Marc Campagne
- Institut Charles Gerhardt Montpellier; UMR 5253 CNRS-UM-ENSCM; Ecole Nationale Supérieure de Chimie de Montpellier; 8 Rue de l'Ecole Normale 34296 Montpellier Cedex 5 France
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Abstract
The present review offers an overview of nonclassical (e.g., with no pre- or in situ activation of a carboxylic acid partner) approaches for the construction of amide bonds. The review aims to comprehensively discuss relevant work, which was mainly done in the field in the last 20 years. Organization of the data follows a subdivision according to substrate classes: catalytic direct formation of amides from carboxylic and amines ( section 2 ); the use of carboxylic acid surrogates ( section 3 ); and the use of amine surrogates ( section 4 ). The ligation strategies (NCL, Staudinger, KAHA, KATs, etc.) that could involve both carboxylic acid and amine surrogates are treated separately in section 5 .
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Affiliation(s)
- Renata Marcia de Figueiredo
- Institut Charles Gerhardt de Montpellier (ICGM), UMR 5253-CNRS-UM-ENSCM, Ecole Nationale Supérieure de Chimie , 8 rue de l'Ecole Normale, 34296 Montpellier Cedex 5, France
| | - Jean-Simon Suppo
- Institut Charles Gerhardt de Montpellier (ICGM), UMR 5253-CNRS-UM-ENSCM, Ecole Nationale Supérieure de Chimie , 8 rue de l'Ecole Normale, 34296 Montpellier Cedex 5, France
| | - Jean-Marc Campagne
- Institut Charles Gerhardt de Montpellier (ICGM), UMR 5253-CNRS-UM-ENSCM, Ecole Nationale Supérieure de Chimie , 8 rue de l'Ecole Normale, 34296 Montpellier Cedex 5, France
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Chen Y, Su L, Yang X, Pan W, Fang H. Enantioselective synthesis of 3,5-disubstituted thiohydantoins and hydantoins. Tetrahedron 2015. [DOI: 10.1016/j.tet.2015.10.041] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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21
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Roberts AG, Johnston EV, Shieh JH, Sondey JP, Hendrickson RC, Moore MAS, Danishefsky SJ. Fully Synthetic Granulocyte Colony-Stimulating Factor Enabled by Isonitrile-Mediated Coupling of Large, Side-Chain-Unprotected Peptides. J Am Chem Soc 2015; 137:13167-75. [PMID: 26401918 PMCID: PMC4617663 DOI: 10.1021/jacs.5b08754] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Human granulocyte colony-stimulating factor (G-CSF) is an endogenous glycoprotein involved in hematopoiesis. Natively glycosylated and nonglycosylated recombinant forms, lenograstim and filgrastim, respectively, are used clinically to manage neutropenia in patients undergoing chemotherapeutic treatment. Despite their comparable therapeutic potential, the purpose of O-linked glycosylation at Thr133 remains a subject of controversy. In light of this, we have developed a synthetic platform to prepare G-CSF aglycone with the goal of enabling access to native and designed glycoforms with site-selectivity and glycan homogeneity. To address the synthesis of a relatively large, aggregation-prone sequence, we advanced an isonitrile-mediated ligation method. The chemoselective activation and coupling of C-terminal peptidyl Gly thioacids with the N-terminus of an unprotected peptide provide ligated peptides directly in a manner complementary to that with conventional native chemical ligation-desulfurization strategies. Herein, we describe the details and application of this method as it enabled the convergent total synthesis of G-CSF aglycone.
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Affiliation(s)
- Andrew G. Roberts
- Laboratory for Bio-Organic Chemistry, Sloan Kettering Institute (SKI) for Cancer Research, New York, New York 10065, United States
- Chemical Biology Program, Sloan Kettering Institute (SKI) for Cancer Research, New York, New York 10065, United States
| | - Eric V. Johnston
- Laboratory for Bio-Organic Chemistry, Sloan Kettering Institute (SKI) for Cancer Research, New York, New York 10065, United States
- Chemical Biology Program, Sloan Kettering Institute (SKI) for Cancer Research, New York, New York 10065, United States
| | - Jae-Hung Shieh
- Cell Biology Program, Sloan Kettering Institute (SKI) for Cancer Research, New York, New York 10065, United States
| | - Joseph P. Sondey
- Chemical Biology Program, Sloan Kettering Institute (SKI) for Cancer Research, New York, New York 10065, United States
| | - Ronald C. Hendrickson
- Chemical Biology Program, Sloan Kettering Institute (SKI) for Cancer Research, New York, New York 10065, United States
| | - Malcolm A. S. Moore
- Cell Biology Program, Sloan Kettering Institute (SKI) for Cancer Research, New York, New York 10065, United States
| | - Samuel J. Danishefsky
- Laboratory for Bio-Organic Chemistry, Sloan Kettering Institute (SKI) for Cancer Research, New York, New York 10065, United States
- Chemical Biology Program, Sloan Kettering Institute (SKI) for Cancer Research, New York, New York 10065, United States
- Cell Biology Program, Sloan Kettering Institute (SKI) for Cancer Research, New York, New York 10065, United States
- Department of Chemistry, Columbia University, New York, New York 10027, United States
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23
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Khaybullin RN, Panda SS, Mirzai S, Toneff E, Asiri AM, Hall CD, Katritzky AR. Arginine thioacid in synthesis of arginine conjugates and peptides. RSC Adv 2014. [DOI: 10.1039/c4ra04897k] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023] Open
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24
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Ma Z, Jiang J, Luo S, Cai Y, Cardon JM, Kay BM, Ess DH, Castle SL. Selective Access to E- and Z-ΔIle-Containing Peptides via a Stereospecific E2 Dehydration and an O → N Acyl Transfer. Org Lett 2014; 16:4044-7. [DOI: 10.1021/ol5018933] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Zhiwei Ma
- Department of Chemistry and
Biochemistry, Brigham Young University, Provo, Utah 84602, United States
| | - Jintao Jiang
- Department of Chemistry and
Biochemistry, Brigham Young University, Provo, Utah 84602, United States
| | - Shi Luo
- Department of Chemistry and
Biochemistry, Brigham Young University, Provo, Utah 84602, United States
| | - Yu Cai
- Department of Chemistry and
Biochemistry, Brigham Young University, Provo, Utah 84602, United States
| | - Joseph M. Cardon
- Department of Chemistry and
Biochemistry, Brigham Young University, Provo, Utah 84602, United States
| | - Benjamin M. Kay
- Department of Chemistry and
Biochemistry, Brigham Young University, Provo, Utah 84602, United States
| | - Daniel H. Ess
- Department of Chemistry and
Biochemistry, Brigham Young University, Provo, Utah 84602, United States
| | - Steven L. Castle
- Department of Chemistry and
Biochemistry, Brigham Young University, Provo, Utah 84602, United States
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Suppo JS, Subra G, Bergès M, Marcia de Figueiredo R, Campagne JM. Inverse Peptide Synthesis via Activated α-Aminoesters. Angew Chem Int Ed Engl 2014. [DOI: 10.1002/ange.201402147] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
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26
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Suppo JS, Subra G, Bergès M, Marcia de Figueiredo R, Campagne JM. Inverse Peptide Synthesis via Activated α-Aminoesters. Angew Chem Int Ed Engl 2014; 53:5389-93. [DOI: 10.1002/anie.201402147] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2014] [Indexed: 12/21/2022]
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27
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Mali SM, Gopi HN. Thioacetic Acid/NaSH-Mediated Synthesis of N-Protected Amino Thioacids and Their Utility in Peptide Synthesis. J Org Chem 2014; 79:2377-83. [DOI: 10.1021/jo402872p] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Sachitanand M. Mali
- Department of Chemistry, Indian Institute of Science Education and Research, Dr. Homi Bhabha Road, Pune 411 008, India
| | - Hosahudya N. Gopi
- Department of Chemistry, Indian Institute of Science Education and Research, Dr. Homi Bhabha Road, Pune 411 008, India
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28
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Bai J, Zambroń BK, Vogel P. Amides in One Pot from Carboxylic Acids and Amines via Sulfinylamides. Org Lett 2014; 16:604-7. [DOI: 10.1021/ol403508j] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Jianfei Bai
- Laboratoire de Glycochimie
et de Synthèse Asymétrique, Swiss Federal Institute of Technology (EPFL), Batochime, CH 1015 Lausanne, Switzerland
| | - Bartosz K. Zambroń
- Laboratoire de Glycochimie
et de Synthèse Asymétrique, Swiss Federal Institute of Technology (EPFL), Batochime, CH 1015 Lausanne, Switzerland
| | - Pierre Vogel
- Laboratoire de Glycochimie
et de Synthèse Asymétrique, Swiss Federal Institute of Technology (EPFL), Batochime, CH 1015 Lausanne, Switzerland
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Fécourt F, Delpech B, Melnyk O, Crich D. Se-(9-Fluorenylmethyl) Selenoesters; Preparation, Reactivity, and Use as Convenient Synthons for Selenoacids. Org Lett 2013; 15:3758-61. [DOI: 10.1021/ol401677a] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Affiliation(s)
- Fabien Fécourt
- Centre de Recherche de Gif, Institut de Chimie des Substances Naturelles, CNRS, 1 Avenue de la Terrasse, 91190 Gif-sur-Yvette, France, CNRS UMR 8161, Univ. Lille Nord de France, Institut Pasteur de Lille, 59021, Lille, France, and Department of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, Michigan 48202, United States
| | - Bernard Delpech
- Centre de Recherche de Gif, Institut de Chimie des Substances Naturelles, CNRS, 1 Avenue de la Terrasse, 91190 Gif-sur-Yvette, France, CNRS UMR 8161, Univ. Lille Nord de France, Institut Pasteur de Lille, 59021, Lille, France, and Department of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, Michigan 48202, United States
| | - Oleg Melnyk
- Centre de Recherche de Gif, Institut de Chimie des Substances Naturelles, CNRS, 1 Avenue de la Terrasse, 91190 Gif-sur-Yvette, France, CNRS UMR 8161, Univ. Lille Nord de France, Institut Pasteur de Lille, 59021, Lille, France, and Department of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, Michigan 48202, United States
| | - David Crich
- Centre de Recherche de Gif, Institut de Chimie des Substances Naturelles, CNRS, 1 Avenue de la Terrasse, 91190 Gif-sur-Yvette, France, CNRS UMR 8161, Univ. Lille Nord de France, Institut Pasteur de Lille, 59021, Lille, France, and Department of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, Michigan 48202, United States
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30
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Ziyaei Halimehjani A, Ranjbari MA, Pasha Zanussi H. Synthesis of a new series of dithiocarbamate-linked peptidomimetics and their application in Ugi reactions. RSC Adv 2013. [DOI: 10.1039/c3ra44552f] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
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