Fluorescent Sensor Based on 1H-Pyrazolo[3,4-b]quinoline Derivative for Detecting Zn2+ Cations

The photophysical and sensory properties of the donor-acceptor pyrazoloquinoline derivative (PQPc) were investigated using absorption, steady-state, and time-resolved fluorescence measurements. The compound synthesized from commercial, readily available substrates exhibited absorptions in the UV-Vis range, with a maximum of the longwave band around 390 nm. The maximum fluorescence was around 460-480 nm, depending on the solvent. The quantum yield was between 12.87% (for n-hexane) and 0.75% (for acetonitrile) and decreased with increasing solvent polarity. The PET mechanism was implicated as the cause of fluorescence quenching. Divalent ions such as Zn2+, Pb2+, Cd2+, Ca2+, Mg2+, Co2+, Ni2+, and Cu2+ were introduced to study the fluorescent response of PQPc. A 13-times increase in fluorescence quantum yield was observed after the addition of Zn2+ ions. Detailed research was carried out for the PQPc-Zn2+ system in order to check the possibility of analytical applications of PQPc as a fluorescent sensor. A detection limit of Zn2+ was set at the value level 1.93 × 10-7 M. PQPc-Zn2+ complexes had a stoichiometry of 1:1 with a binding constant of 859 M-1. Biological studies showed that the sensor was localized in cells near the membrane and cytoplasm and may be used to detect zinc ions in eukaryotic cells.

Photoinduced charge transfer in push-pull pyrazoline-based chromophores - Relationship between molecular structure and photophysical, photovoltaic properties

The manuscript describes the effect of molecular structure on the photophysical and photovoltaic properties of the pyrazoline-based donor-branched-π-system-acceptor compounds decorated with two end groups: phenyl or thiophene. Although the absorption to the first singlet excited state is strongly allowed, the emission quantum yield is low in all studied solvents. This behaviour was explained by the existence of two non-radiative deactivation channels: the back electron transfer process, especially operated in polar solvents, and internal conversion realized as the rotation of flexible rotors (cyano, keto phenyl or thiophene). The feasibility of the photoinduced electron transfer process was corroborated by electrochemical, spectroelectrochemical measurements as well as DFT calculations. DFT calculations also support the existence of multiple conformations in the ground state, which differ from one another in terms of charge distribution and the values of ground state dipole moment. Finally, the mechanism of the singlet excited state deactivation of the studied compounds was determined by ultrafast pump-probe measurements. Our studies revealed that charge/electron transfer process may undergo over carbonyl bridge, included in branched π-system. Moreover, the thiophene decorated pyrazoline is characterized by a better photovoltaic power conversion efficiency, while the phenyl-ended pyrazoline can be applied as a viscosity sensor.

A Tool, an App and a Field: Fluorescent PET Sensors, Blood Electrolyte Analysis and Molecular Logic as Products of Supramolecular Photoscience from Northern Ireland and Sri Lanka

The general tool of fluorescent PET (photoinduced electron transfer) sensors/switches - a molecular design principle with engineering features - is outlined, with the aid of frontier orbital energy diagrams. Fluorophores such as anthracene, 1,3-diaryl-Δ² -pyrazolines and 4-amino-1,8-naphthalimides are employed within this system, alongside receptors such as amines, carboxylates, crown ethers and amino acids. This tool appealed to a multinational corporation for building a medical analyzer for electrolytes such as Na⁺ , K⁺ , Ca²⁺ and gases like CO₂ , which became a commercially successful application. Finally, the tool was a springboard for chemistry to cross into computer science. The field of molecular logic can elucidate how molecules inside us handle information. Molecular examples of the simplest logic gates such as YES, NOT, OR, AND are described. A case of a human-level computation - visual edge detection - is also included.

Molecular engineering of fluorescent bichromophore 1,3,5-triaryl-Δ2-pyrazoline and 4-amino-1,8-naphthalimide molecular logic gates

Emissive bichromophoric solvatochromatic molecules are introduced as a new platform for the development of fluorescent molecular logic gates.

Fluorescent Molecular Logic Gates Driven by Temperature and by Protons in Solution and on Solid

Temperature-driven fluorescent NOT logic is demonstrated by exploiting predissociation in a 1,3,5-trisubstituted Δ² -pyrazoline on its own and when grafted onto silica microparticles. Related Δ² -pyrazolines become proton-driven YES and NOT logic gates on the basis of fluorescent photoinduced electron transfer (PET) switches. Additional PASS 1 and YES+PASS 1 logic gates on silica are also demonstrated within the same family. Beside these small-molecule systems, a polymeric molecular thermometer based on a benzofurazan-derivatized N-isopropylacrylamide copolymer is attached to silica to produce temperature-driven fluorescent YES logic.

A novel self-assembled Na{Cu12Zn4} multifunctional material: first report of a discrete coordination compound for detection of Ca2+ions and selective adsorption of cationic dyes in water

A novel discrete Na{Cu₁₂Zn₄} unit is discovered with the ability to sense calcium ions (with ultra-low detection limit) as well as to adsorb cationic dyes in the aqueous phase with high performance.

Photoreversible stretching of a BAPTA chelator marshalling Ca2+-binding in aqueous media

Free calcium ion concentration is known to govern numerous biological processes and indeed calcium acts as an important biological secondary messenger for muscle contraction, neurotransmitter release, ion-channel gating, and exocytosis. As such, the development of molecules with the ability to instantaneously increase or diminish free calcium concentrations potentially allows greater control over certain biological functions. In order to permit remote regulation of Ca²⁺, a selective BAPTA-type synthetic receptor / host was integrated with a photoswitchable azobenzene motif, which upon photoirradiation would enhance (or diminish) the capacity to bind calcium upon acting on the conformation of the adjacent binding site, rendering it a stronger or weaker binder. Photoswitching was studied in pseudo-physiological conditions (pH 7.2, [KCl] = 100 mM) and dissociation constants for azobenzene cis- and trans-isomers have been determined (0.230 μM and 0.102 μM, respectively). Reversible photoliberation/uptake leading to a variation of free calcium concentration in solution was detected using a fluorescent Ca²⁺ chemosensor.

Molecular logic gates: the past, present and future

The field of molecular logic gates originated 25 years ago, when A. P. de Silva published a seminal article in Nature. Stimulated by this ground breaking research, scientists were inspired to join the race to simulate the workings of the fundamental components of integrated circuits using molecules. The rules of this game of mimicry were flexible, and have evolved and morphed over the years. This tutorial review takes a look back on and provides an overview of the birth and growth of the field of molecular logics. Spinning-off from chemosensor research, molecular logic gates quickly proved themselves to be more than intellectual exercises and are now poised for many potential practical applications. The ultimate goal of this vein of research became clearer only recently - to "boldly go where no silicon-based logic gate has gone before" and seek out a new deeper understanding of life inside tissues and cells.

Stationary and time-resolved spectra analysis of pyrazoloquinoline derivatives with pyridyl moiety

Two derivatives of pyrazoloquinoline with pyridyl moiety: 6-N,N-dimethyl-3-phenyl-1-(2-pyridyl)-1H-pyrazolo[3,4-b]quinoline (DMA-1PPhPQ) and 6-N,N-dimethyl-1,3-(di-2-pyridyl)-1H-pyrazolo[3,4-b]quinoline (DMA-1,3PPQ) were synthesized with commercial substrates. The theoretical characterization of both compounds was done. Geometry optimizations give not flat structure with the first absorption band at the wavelength about 390nm for both compounds. Several electro-optical parameters were also calculated. The optical properties of DMA-1PPHPQ and DMA-1,3PPQ were investigated by ultraviolet-visible spectroscopy and stationary as well as time-resolved fluorescence. The fluorescence maximum and fluorescence quantum yield are strongly dependent on solvent polarity function. Results indicate CT fluorescence for both compounds. Because of high emission the investigated pyrazoloquinoline derivatives can be potential candidates for fabrications of electroluminescent devices.

Structural and spectroscopic insight into the metal binding properties of the o-aminophenol-N,N,O-triacetic acid (APTRA) chelator: implications for design of metal indicators

The o-aminophenol-N,N,O-triacetic acid (APTRA) chelator is employed extensively as a metal-recognition moiety in fluorescent indicators for biological free Mg(2+), as well as in low-affinity indicators for the detection of high levels of cellular Ca(2+). Despite its widespread use in sensor design, the limited metal selectivity of this chelating moiety can lead to binding of competing cations that complicate the fluorescence-based detection of metals of interest in complex samples. Reported herein are the structural characterization of APTRA complexes with various biologically relevant cations, and the thermodynamic analysis of complex formation with Mg(2+), Ca(2+) and Zn(2+). Our results indicate that the low affinity of APTRA for Mg(2+), which makes it a suitable metal-recognition moiety for sensitive analysis of typical millimolar levels of this metal in cells, stems from a much higher enthalpic cost of Mg(2+) binding compared to that of other cations. The results are discussed in the context of indicator design, highlighting the aspects that may aid the future development of fluorescent sensors with enhanced metal selectivity profiles.

Rapid preparation of self-assembled CdTe quantum dots used for sensing of DNA in urine

In this article, the authors report a systematic study of the self-assembly of CdTe quantum dots (QDs) stabilized by mercaptosuccinic acid (MSA) at laboratory temperature (25 °C) or after thermal treatment (90 °C).

A multi-responsive thiosemicarbazone-based probe for detection and discrimination of group 12 metal ions and its application in logic gates

A new simple 3-in-1 multi-response thiosemicarbazone-based chemosensor has been synthesized and characterized.

Enhanced selectivity for Mg2+with a phosphinate-based chelate: APDAPversusAPTRA

AnO-methylene-methylphosphinate analogue of APTRA shows a much greater reduction in affinity for Ca²⁺than Mg²⁺, offering a way to improved magnesium-selective ligands.

Synthetic water soluble di-/tritopic molecular receptors exhibiting Ca2+/Mg2+ exchange

Structural integration of two synthetic water soluble receptors for Ca²⁺ and Mg²⁺, namely 1,2-bis(2-aminophenoxy)ethane-N,N,N',N'-tetraacetic acid (BAPTA) and o-aminophenol-N,N,O-triacetic acid (APTRA), respectively, gave novel di- and tritopic ionophores (1 and 2). As Mg²⁺ and Ca²⁺ cannot be simultaneously complexed by the receptors, allosteric control of complexation results. Potentiometric measurements established stepwise protonation constants and showed high affinity for Ca²⁺ (log K = 6.08 and 8.70 for 1 and 2, respectively) and an excellent selectivity over Mg²⁺ (log K = 3.70 and 5.60 for 1 and 2, respectively), which is compatible with magnesium-calcium ion exchange. While ion-exchange of a single Mg²⁺ for a single Ca²⁺ is possible in both 1 and 2, the simultaneous binding of two Mg²⁺ by 2 appears prohibitive for replacement of these two ions by a single Ca²⁺. Ion-binding and exchange was further rationalized by DFT calculations.

Expression of fluorescence properties by self-PET (photo-induced electron transfer) suppression both in solution and in the solid state

An-SO3H which is constructed from a PET (photo-induced electron transfer)-based structure expresses fluorescence properties due to the self-PET suppression both in the solution and in the solid-state.

Water-soluble β-aminobisulfonate building blocks for pH and Cu2+ indicators

Two phenyl β-aminobisulfonate ligands characterised by UV-visible absorption, EPR and ¹H NMR spectroscopy exhibit evidence for binding with Cu²⁺ in water and methanol.

Phenanthrimidazole as a fluorescent sensor with logic gate operations

A novel sensor namely, 1-(1-(p-tolyl)-1H-phenanthro[9,10-d]imidazol-2-yl)naphthalen-2-ol was synthesised for the detection of anion as well as cation through intramolecular charge transfer mechanism. This compound was used for the selective detection of Zn(2+) ion as compared to other metal ions and the binding was evidenced from the new absorption band at 356 nm and switch on fluorescence at 453 nm. The switch on fluorescence can be explained on the basis of photoinduced electron transfer (PET) mechanism and it was demonstrated by logic gate functions.

Fluorescence Characteristics of [(Benzoyloxy)methyl]anthracene Donor-Acceptor Systems

A theoretical investigation on fluorescence properties of [(benzoyloxy)methyl]anthracene derivatives containing different groups (OCH3, CH3, H, CF3, F, CN, and NO2) as substituent on the phenyl ring is reported. Electron transfer rate constants for the molecules were calculated using Marcus theory. Theoretical electron transfer rate constants agreed with experimentally observed trend of fluorescence quenching. Large electron transfer rate constants were obtained for molecules containing strongly electron withdrawing groups as the substituent on the phenyl ring. Calculations were conducted at Hartree-Fock and density functional (HF/6-31G(d) and B3LYP/6-31G(d)) levels of theory. Density functional theory predicted spurious charge transfer excited states for molecules containing NO2, CN, and CF3 as the substituent on the phenyl ring.

1,3,5-Triarylpyrazolines — pH-driven off-on-off molecular logic devices based on a “receptor1-fluorophore-spacer-receptor2” format with internal charge transfer (ICT) and photoinduced electron transfer (PET) mechanisms

The excited state photophysical properties of the 1,3,5-triarylpyrazolines 1–4 were studied in methanol and 1:1 (v/v) methanol–water, as well as 1:4 (v/v) methanol–water and water by fluorescence spectroscopy. The molecules 2–4 incorporate a “receptor1-fluorophore-spacer-receptor2” format while 1 is a reference compound based on a “fluorophore-receptor1” design. The molecular probes operate according to photoinduced electron transfer (PET) and internal charge transfer (ICT) processes. At basic and neutral pHs, 2–4 are essentially nonfluorescent due to PET from the electron-donating dimethylamino moiety appended on the 5-phenyl ring to the excited state of the 1,3,5-triarylpyrazoline fluorophore. At proton concentrations of 10−3 mol/L, the dimethylamino unit is protonated resulting in a strong blue fluorescence about 460 nm with significant quantum yields up to 0.54. At acid concentrations above 10−2 mol/L, fluorescence quenching is observed by an ICT mechanism due to protonation of the pyrazoline chromophore. Symmetrical off-on-off fluorescence–pH profiles are observed, spanning six log units with a narrow on window within three pH units. Hence, 2–4 are novel examples of ternary photonic pH sensing molecular devices.

X-ray structurally characterized sensors for ratiometric detection of Zn2+ and Al3+ in human breast cancer cells (MCF7): development of a binary logic gate as a molecular switch

A very simple molecule derived from salicylaldehyde and N-phenyl ethylenediamine (L1) functions as a dual-mode ratiometric fluorescence “turn on” sensor for Zn²⁺ and Al³⁺ at two different wavelengths.

An imidazolyl-pyreno-imidazole conjugate as a cyanide sensor and a set–reset memorized sequential logic device

A pyrenyl-bisimidazole system can act as an efficient cyanide sensor and a ‘set–reset’ memory device.

Integration of the 1,2,3-triazole "click" motif as a potent signalling element in metal ion responsive fluorescent probes

In a systematic approach we synthesized a new series of fluorescent probes incorporating donor-acceptor (D-A) substituted 1,2,3-triazoles as conjugative π-linkers between the alkali metal ion receptor N-phenylaza-[18]crown-6 and different fluorophoric groups with different electron-acceptor properties (4-naphthalimide, meso-phenyl-BODIPY and 9-anthracene) and investigated their performance in organic and aqueous environments (physiological conditions). In the charge-transfer (CT) type probes 1, 2 and 7, the fluorescence is almost completely quenched by intramolecular CT (ICT) processes involving charge-separated states. In the presence of Na(+) and K(+) ICT is interrupted, which resulted in a lighting-up of the fluorescence in acetonitrile. Among the investigated fluoroionophores, compound 7, which contains a 9-anthracenyl moiety as the electron-accepting fluorophore, is the only probe which retains light-up features in water and works as a highly K(+)/Na(+)-selective probe under simulated physiological conditions. Virtually decoupled BODIPY-based 6 and photoinduced electron transfer (PET) type probes 3-5, where the 10-substituted anthracen-9-yl fluorophores are connected to the 1,2,3-triazole through a methylene spacer, show strong ion-induced fluorescence enhancement in acetonitrile, but not under physiological conditions. Electrochemical studies and theoretical calculations were used to assess and support the underlying mechanisms for the new ICT and PET 1,2,3-triazole fluoroionophores.

Enzyme-based D-flip-flop memory system

The enzyme system was used to mimic the D-flip-flop memory unit. The reversible conversion of NAD(+) and NADH cofactors was used to encode the states of the memory unit, while a mixture of inhibitors was used as the Clock input and the substrates were used as the Data input.

Fluorescence enhancement and end-to-end assembly of bisacridinedione-gold nanorods by calcium ions

Gold nanorod end-to-end assembly is demonstrated by the selective complexation of a bisacridinedione foldamer with Ca(2+). This setup can be applied as a chemosensor for Ca(2+) ions, as the complex shows selective red-shifting of the nanorod plasmon peak and enhancement in fluorescence from the acridinedione moieties upon exposure to Ca(2+) .

High-contrast Cu(I)-selective fluorescent probes based on synergistic electronic and conformational switching

The design of fluorescent probes for the detection of redox-active transition metals such as Cu(I/II) is challenging due to potentially interfering metal-induced non-radiative deactivation pathways. By using a ligand architecture with a built-in conformational switch that maximizes the change in donor potential upon metal binding and an electronically decoupled tunable pyrazoline fluorophore as acceptor, we systematically optimized the photoinduced electron transfer (PET) switching behavior of a series of Cu(I)-selective probes and achieved an excellent fluorescence enhancement of greater than 200-fold. Crystal structure analysis combined with NMR solution studies revealed significant conformational changes of the ligand framework upon Cu(I) coordination. The photophysical data are consistent with a kinetically controlled PET reaction involving only the ligand moiety, despite the fact that Cu(I)-mediated reductive quenching would be thermodynamically preferred. The study demonstrates that high-contrast ratios can be achieved even for redox-active metal cations, providing that the metal-initiated quenching pathways are kinetically unfavorable.

Multi-enzyme logic network architectures for assessing injuries: digital processing of biomarkers

A multi-enzyme biocatalytic cascade processing simultaneously five biomarkers characteristic of traumatic brain injury (TBI) and soft tissue injury (STI) was developed. The system operates as a digital biosensor based on concerted function of 8 Boolean AND logic gates, resulting in the decision about the physiological conditions based on the logic analysis of complex patterns of the biomarkers. The system represents the first example of a multi-step/multi-enzyme biosensor with the built-in logic for the analysis of complex combinations of biochemical inputs. The approach is based on recent advances in enzyme-based biocomputing systems and the present paper demonstrates the potential applicability of biocomputing for developing novel digital biosensor networks.

Enzyme-based multiplexer and demultiplexer

A digital 2-to-1 multiplexer and a 1-to-2 demultiplexer were mimicked by biocatalytic reactions involving concerted operation of several enzymes. Using glucose oxidase (GOx) and laccase (Lac) as the data input signals and variable pH as the addressing signal, ferrocyanide oxidation in the output channel was selectively activated by one from two inputs, thus mimicking the multiplexer operation. A demultiplexer based on the enzyme system composed of GOx, glucose dehydrogenase (GDH) and horseradish peroxidase (HRP) allowed selective activation of different output channels (oxidation of ferrocyanide or reduction of NAD(+)) by the glucose input. The selection of the output channel was controlled by the addressing input of NAD(+). The designed systems represent important novel components of future branched enzyme networks processing biochemical signals for biosensing and bioactuating.