1
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Maity C, Das N. Alginate-Based Smart Materials and Their Application: Recent Advances and Perspectives. Top Curr Chem (Cham) 2021; 380:3. [PMID: 34812965 DOI: 10.1007/s41061-021-00360-8] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2021] [Accepted: 11/03/2021] [Indexed: 12/14/2022]
Abstract
Nature produces materials using available molecular building blocks following a bottom-up approach. These materials are formed with great precision and flexibility in a controlled manner. This approach offers the inspiration for manufacturing new artificial materials and devices. Synthetic artificial materials can find many important applications ranging from personalized therapeutics to solutions for environmental problems. Among these materials, responsive synthetic materials are capable of changing their structure and/or properties in response to external stimuli, and hence are termed "smart" materials. Herein, this review focuses on alginate-based smart materials and their stimuli-responsive preparation, fragmentation, and applications in diverse fields from drug delivery and tissue engineering to water purification and environmental remediation. In the first part of this report, we review stimuli-induced preparation of alginate-based materials. Stimuli-triggered decomposition of alginate materials in a controlled fashion is documented in the second part, followed by the application of smart alginate materials in diverse fields. Because of their biocompatibility, easy accessibility, and simple techniques of material formation, alginates can provide solutions for several present and future problems of humankind. However, new research is needed for novel alginate-based materials with new functionalities and well-defined properties for targeted applications.
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Affiliation(s)
- Chandan Maity
- Department of Chemistry, School of Advanced Science (SAS), Vellore Institute of Technology (VIT), Vellore, Tamil Nadu, 632014, India.
| | - Nikita Das
- Department of Chemistry, School of Advanced Science (SAS), Vellore Institute of Technology (VIT), Vellore, Tamil Nadu, 632014, India
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2
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Roquero DM, Bollella P, Melman A, Katz E. Nanozyme-Triggered DNA Release from Alginate Films. ACS APPLIED BIO MATERIALS 2020; 3:3741-3750. [DOI: 10.1021/acsabm.0c00348] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Affiliation(s)
- Daniel Massana Roquero
- Department of Chemistry and Biomolecular Science, Clarkson University, 8 Clarkson Avenue, Potsdam, New York 13699, United States
| | - Paolo Bollella
- Department of Chemistry and Biomolecular Science, Clarkson University, 8 Clarkson Avenue, Potsdam, New York 13699, United States
| | - Artem Melman
- Department of Chemistry and Biomolecular Science, Clarkson University, 8 Clarkson Avenue, Potsdam, New York 13699, United States
| | - Evgeny Katz
- Department of Chemistry and Biomolecular Science, Clarkson University, 8 Clarkson Avenue, Potsdam, New York 13699, United States
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3
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Huang Z, Duan B, Li J, Wang M, Yang W. Fabrication of prime number checkers based on colorimetric responses of gold nanoparticles. NEW J CHEM 2019. [DOI: 10.1039/c9nj00914k] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
In this work, we demonstrated the fabrication of molecular prime number checkers based on the concentration- and sequence-dependent colorimetric responses of citrate-capped gold nanoparticles (Au NPs) to two simple model chemicals, i.e. cysteine (Cys) and Hg2+ ions.
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Affiliation(s)
- Zhenzhen Huang
- State Key Laboratory of Inorganic Synthesis and Preparative Chemistry
- College of Chemistry
- Jilin University
- Changchun 130012
- P. R. China
| | - Bohui Duan
- State Key Laboratory of Inorganic Synthesis and Preparative Chemistry
- College of Chemistry
- Jilin University
- Changchun 130012
- P. R. China
| | - Jinshuo Li
- State Key Laboratory of Inorganic Synthesis and Preparative Chemistry
- College of Chemistry
- Jilin University
- Changchun 130012
- P. R. China
| | - Min Wang
- State Key Laboratory of Inorganic Synthesis and Preparative Chemistry
- College of Chemistry
- Jilin University
- Changchun 130012
- P. R. China
| | - Wensheng Yang
- State Key Laboratory of Inorganic Synthesis and Preparative Chemistry
- College of Chemistry
- Jilin University
- Changchun 130012
- P. R. China
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4
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Filipov Y, Zakharchenko A, Minko S, Katz E. Magneto‐Controlled Biocatalytic Cascades with Logically Processed Input Signals – Substrate Channeling versus Free Diffusion. Chemphyschem 2018; 19:3035-3043. [DOI: 10.1002/cphc.201800851] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2018] [Indexed: 11/11/2022]
Affiliation(s)
- Yaroslav Filipov
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699 USA
| | | | - Sergiy Minko
- Nanostructured Materials Lab University of Georgia Athens GA 30602 USA
| | - Evgeny Katz
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699 USA
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5
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Gamella M, Privman M, Bakshi S, Melman A, Katz E. DNA Release from Fe
3+
‐Cross‐Linked Alginate Films Triggered by Logically Processed Biomolecular Signals: Integration of Biomolecular Computing and Actuation. Chemphyschem 2017; 18:1811-1821. [DOI: 10.1002/cphc.201700301] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2017] [Revised: 04/29/2017] [Indexed: 11/10/2022]
Affiliation(s)
- Maria Gamella
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699-5810 USA
| | - Marina Privman
- Empire State College State University of New York (SUNY) P.O. Box 908 Fort Drum NY 13602 USA
| | - Saira Bakshi
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699-5810 USA
| | - Artem Melman
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699-5810 USA
| | - Evgeny Katz
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699-5810 USA
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6
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Scheja S, Domanskyi S, Gamella M, Wormwood KL, Darie CC, Poghossian A, Schöning MJ, Melman A, Privman V, Katz E. Glucose‐Triggered Insulin Release from Fe
3+
‐Cross‐linked Alginate Hydrogel: Experimental Study and Theoretical Modeling. Chemphyschem 2017; 18:1541-1551. [DOI: 10.1002/cphc.201700195] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2017] [Indexed: 12/22/2022]
Affiliation(s)
- Sabrina Scheja
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699-5810 USA
- Institute of Nano- and Biotechnologies, FH Aachen Aachen University of Applied Sciences, Campus Jülich Heinrich-Mußmann-Str. 1 52428 Jülich Germany
| | - Sergii Domanskyi
- Department of Physics Clarkson University Potsdam NY 13699-5820 USA
| | - Maria Gamella
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699-5810 USA
| | - Kelly L. Wormwood
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699-5810 USA
| | - Costel C. Darie
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699-5810 USA
| | - Arshak Poghossian
- Institute of Nano- and Biotechnologies, FH Aachen Aachen University of Applied Sciences, Campus Jülich Heinrich-Mußmann-Str. 1 52428 Jülich Germany
- Peter Grünberg Institute (PGI-8), Research Centre Jülich GmbH 52425 Jülich Germany
| | - Michael J. Schöning
- Institute of Nano- and Biotechnologies, FH Aachen Aachen University of Applied Sciences, Campus Jülich Heinrich-Mußmann-Str. 1 52428 Jülich Germany
- Peter Grünberg Institute (PGI-8), Research Centre Jülich GmbH 52425 Jülich Germany
| | - Artem Melman
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699-5810 USA
| | - Vladimir Privman
- Department of Physics Clarkson University Potsdam NY 13699-5820 USA
| | - Evgeny Katz
- Department of Chemistry and Biomolecular Science Clarkson University Potsdam NY 13699-5810 USA
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7
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Wood ML, Domanskyi S, Privman V. Design of High Quality Chemical XOR Gates with Noise Reduction. Chemphyschem 2017; 18:1773-1781. [DOI: 10.1002/cphc.201700018] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2017] [Indexed: 11/06/2022]
Affiliation(s)
- Mackenna L. Wood
- Department of Physics; Clarkson University; Potsdam NY 13676 USA
| | - Sergii Domanskyi
- Department of Physics; Clarkson University; Potsdam NY 13676 USA
| | - Vladimir Privman
- Department of Physics; Clarkson University; Potsdam NY 13676 USA
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8
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Domanskyi S, Privman V. Modeling and Modifying Response of Biochemical Processes for Biocomputing and Biosensing Signal Processing. EMERGENCE, COMPLEXITY AND COMPUTATION 2017. [DOI: 10.1007/978-3-319-33921-4_3] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
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9
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Katz E, Poghossian A, Schöning MJ. Enzyme-based logic gates and circuits-analytical applications and interfacing with electronics. Anal Bioanal Chem 2016; 409:81-94. [PMID: 27900435 DOI: 10.1007/s00216-016-0079-7] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2016] [Revised: 10/27/2016] [Accepted: 11/03/2016] [Indexed: 12/24/2022]
Abstract
The paper is an overview of enzyme-based logic gates and their short circuits, with specific examples of Boolean AND and OR gates, and concatenated logic gates composed of multi-step enzyme-biocatalyzed reactions. Noise formation in the biocatalytic reactions and its decrease by adding a "filter" system, converting convex to sigmoid response function, are discussed. Despite the fact that the enzyme-based logic gates are primarily considered as components of future biomolecular computing systems, their biosensing applications are promising for immediate practical use. Analytical use of the enzyme logic systems in biomedical and forensic applications is discussed and exemplified with the logic analysis of biomarkers of various injuries, e.g., liver injury, and with analysis of biomarkers characteristic of different ethnicity found in blood samples on a crime scene. Interfacing of enzyme logic systems with modified electrodes and semiconductor devices is discussed, giving particular attention to the interfaces functionalized with signal-responsive materials. Future perspectives in the design of the biomolecular logic systems and their applications are discussed in the conclusion. Graphical Abstract Various applications and signal-transduction methods are reviewed for enzyme-based logic systems.
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Affiliation(s)
- Evgeny Katz
- Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, NY, 13699-5810, USA.
| | - Arshak Poghossian
- Institute of Nano- and Biotechnologies, FH Aachen, Aachen University of Applied Sciences, Campus Jülich, Heinrich-Mußmann-Str. 1, 52428, Jülich, Germany. .,Peter Grünberg Institute (PGI-8), Research Centre Jülich GmbH, 52425, Jülich, Germany.
| | - Michael J Schöning
- Institute of Nano- and Biotechnologies, FH Aachen, Aachen University of Applied Sciences, Campus Jülich, Heinrich-Mußmann-Str. 1, 52428, Jülich, Germany. .,Peter Grünberg Institute (PGI-8), Research Centre Jülich GmbH, 52425, Jülich, Germany.
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10
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Chen N, Qin S, Yang X, Wang Q, Huang J, Wang K. "Sense-and-Treat" DNA Nanodevice for Synergetic Destruction of Circulating Tumor Cells. ACS APPLIED MATERIALS & INTERFACES 2016; 8:26552-26558. [PMID: 27653943 DOI: 10.1021/acsami.6b08695] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
DNA nanostrucures are promising materials for biomedical applications. Herein, we established a "sense-and-treat" localized drug delivery system based on a DNA nanodevice to specifically destroy circulating tumor cells (CTCs) by synergetic chemotherapy and photodynamic therapy. The DNA nanodevices could sense the existence of CTCs and treat CTCs with anticancer agents. Typically, the presence of target cell promoted the formation of hairpin structure of aptamer, and then the aptamer-accompanied DNA tetrahedron would release from the supporter. The chemotherapy drugs (doxorubicin, Dox) loaded in DNA tetrahedron would destroy the CTCs specifically. Moreover, the photosensitizer labeled on DNA tetrahedron would be activated by lights and generated toxic 1O2, once DNA nanodevices bound CTCs flow through the superficial capillary. Unlike the aptamer only labeled with photosensitizer, the DNA nanodevice showed the capability to promote cellular internalization of anticancer agents, increase drug loading capacity, and realize synergetic therapy, which enhanced the destructive ability of anticancer agents. As proof of concept, this DNA nanodevice has the potential to inhibit metastasis by synergetic destruction of CTCs.
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Affiliation(s)
- Nandi Chen
- State Key Laboratory of Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Key Laboratory for Bio-Nanotechnology and Molecular Engineering of Hunan Province, Hunan University , Changsha 410082, China
| | - Shiya Qin
- State Key Laboratory of Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Key Laboratory for Bio-Nanotechnology and Molecular Engineering of Hunan Province, Hunan University , Changsha 410082, China
| | - Xiaohai Yang
- State Key Laboratory of Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Key Laboratory for Bio-Nanotechnology and Molecular Engineering of Hunan Province, Hunan University , Changsha 410082, China
| | - Qing Wang
- State Key Laboratory of Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Key Laboratory for Bio-Nanotechnology and Molecular Engineering of Hunan Province, Hunan University , Changsha 410082, China
| | - Jin Huang
- State Key Laboratory of Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Key Laboratory for Bio-Nanotechnology and Molecular Engineering of Hunan Province, Hunan University , Changsha 410082, China
| | - Kemin Wang
- State Key Laboratory of Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Key Laboratory for Bio-Nanotechnology and Molecular Engineering of Hunan Province, Hunan University , Changsha 410082, China
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11
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Privman V, Domanskyi S, Luz RAS, Guz N, Glasser ML, Katz E. Diffusion of Oligonucleotides from within Iron-Cross-Linked, Polyelectrolyte-Modified Alginate Beads: A Model System for Drug Release. Chemphyschem 2016; 17:976-84. [PMID: 26762598 DOI: 10.1002/cphc.201501186] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2015] [Indexed: 12/24/2022]
Abstract
An analytical model to describe diffusion of oligonucleotides from stable hydrogel beads is developed and experimentally verified. The synthesized alginate beads are Fe(3+) -cross-linked and polyelectrolyte-doped for uniformity and stability at physiological pH. Data on diffusion of oligonucleotides from inside the beads provide physical insights into the volume nature of the immobilization of a fraction of oligonucleotides due to polyelectrolyte cross-linking, that is, the absence of a surface-layer barrier in this case. Furthermore, the results suggest a new simple approach to measuring the diffusion coefficient of mobile oligonucleotide molecules inside hydrogels. The considered alginate beads provide a model for a well-defined component in drug-release systems and for the oligonucleotide-release transduction steps in drug-delivering and biocomputing applications. This is illustrated by destabilizing the beads with citrate, which induces full oligonucleotide release with nondiffusional kinetics.
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Affiliation(s)
- Vladimir Privman
- Department of Physics, Clarkson University, Potsdam, NY, 13676, USA.
| | - Sergii Domanskyi
- Department of Physics, Clarkson University, Potsdam, NY, 13676, USA
| | - Roberto A S Luz
- Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, NY, 13676, USA.,Instituto de Química de São Carlos, Universidade de São Paulo, São Carlos, SP, 13560-970, Brazil
| | - Nataliia Guz
- Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, NY, 13676, USA
| | | | - Evgeny Katz
- Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, NY, 13676, USA.
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12
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Cai Z, Chai Y, Zhang C, Feng R, Sang H, Lu L. Molecular Characterization of Gβ-Like Protein CpcB Involved in Antifungal Drug Susceptibility and Virulence in A. fumigatus. Front Microbiol 2016; 7:106. [PMID: 26903985 PMCID: PMC4746314 DOI: 10.3389/fmicb.2016.00106] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2015] [Accepted: 01/20/2016] [Indexed: 12/16/2022] Open
Abstract
Aspergillus fumigatus is an airborne human fungal pathogen that can survive in a wide range of environmental condition. G protein complex transduces external signals from a variety of stimuli outside a cell to its interior effectors in all eukaryotes. Gβ-like CpcB (cross pathway control B) belongs to a WD40 repeat protein family with the conserved G-H and W-D residues. Previous studies have demonstrated that Gβ-like proteins cooperate with related signal transduction proteins to function during many important developmental processes in A. fumigatus. However, the molecular characteristics of Gβ-like CpcB have not yet been identified. In this study, we demonstrated that the G-H residues in WD repeat 1, 2, 3, and the W-D residue in WD repeat 2 of CpcB are required not only to control normal hyphal growth and conidiation but also to affect antifungal drug susceptibility. The enhanced drug resistance might be due to reduced intracellular drug accumulation and altered ergosterol component. Moreover, we find that the first G-H residue of CpcB plays an important role in the virulence of A. fumigatus. To our knowledge, this is the first report for finding the importance of the conserved G-H and W-D residues for a Gβ-like protein in understanding of G protein functions.
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Affiliation(s)
- Zhendong Cai
- Jiangsu Key Laboratory for Microbes and Functional Genomics, Jiangsu Engineering and Technology Research Center for Microbiology, College of Life Sciences, Nanjing Normal UniversityNanjing, China
| | - Yanfei Chai
- Jiangsu Key Laboratory for Microbes and Functional Genomics, Jiangsu Engineering and Technology Research Center for Microbiology, College of Life Sciences, Nanjing Normal UniversityNanjing, China
| | - Caiyun Zhang
- Department of Dermatology, Jinling Hospital, School of Medicine, Nanjing UniversityNanjing, China
| | - Ruoyun Feng
- Jiangsu Key Laboratory for Microbes and Functional Genomics, Jiangsu Engineering and Technology Research Center for Microbiology, College of Life Sciences, Nanjing Normal UniversityNanjing, China
| | - Hong Sang
- Department of Dermatology, Jinling Hospital, School of Medicine, Nanjing UniversityNanjing, China
| | - Ling Lu
- Jiangsu Key Laboratory for Microbes and Functional Genomics, Jiangsu Engineering and Technology Research Center for Microbiology, College of Life Sciences, Nanjing Normal UniversityNanjing, China
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13
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Katz E, Minko S. Enzyme-based logic systems interfaced with signal-responsive materials and electrodes. Chem Commun (Camb) 2015; 51:3493-500. [PMID: 25578785 DOI: 10.1039/c4cc09851j] [Citation(s) in RCA: 54] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Enzyme-based biocomputing systems were interfaced with signal-responsive membranes and electrodes resulting in bioelectronic devices switchable by logically processed biomolecular signals. "Smart" membranes, electrodes, biofuel cells, memristors and substance-releasing systems were activated by various combinations of biomolecular signals in the pre-programmed way implemented in biocatalytic cascades mimicking logic networks.
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Affiliation(s)
- Evgeny Katz
- Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, NY 13699, USA.
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14
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Mailloux S, Gerasimova YV, Guz N, Kolpashchikov DM, Katz E. Bridging the Two Worlds: A Universal Interface between Enzymatic and DNA Computing Systems. Angew Chem Int Ed Engl 2015; 54:6562-6. [PMID: 25864379 PMCID: PMC4495919 DOI: 10.1002/anie.201411148] [Citation(s) in RCA: 101] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2014] [Revised: 02/06/2015] [Indexed: 11/09/2022]
Abstract
Molecular computing based on enzymes or nucleic acids has attracted a great deal of attention due to the perspectives of controlling living systems in the way we control electronic computers. Enzyme-based computational systems can respond to a great variety of small molecule inputs. They have the advantage of signal amplification and highly specific recognition. DNA computing systems are most often controlled by oligonucleotide inputs/outputs and are capable of sophisticated computing as well as controlling gene expressions. Here, we developed an interface that enables communication of otherwise incompatible nucleic-acid and enzyme-computational systems. The enzymatic system processes small molecules as inputs and produces NADH as an output. The NADH output triggers electrochemical release of an oligonucleotide, which is accepted by a DNA computational system as an input. This interface is universal because the enzymatic and DNA computing systems are independent of each other in composition and complexity.
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Affiliation(s)
- Shay Mailloux
- Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, NY 13699-5810 (USA)
| | - Yulia V Gerasimova
- Chemistry Department, University of Central Florida, 4000 Central Florida Boulevard, Orlando, FL 32816-2366 (USA)
| | - Nataliia Guz
- Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, NY 13699-5810 (USA)
| | - Dmitry M Kolpashchikov
- Chemistry Department, University of Central Florida, 4000 Central Florida Boulevard, Orlando, FL 32816-2366 (USA).
| | - Evgeny Katz
- Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, NY 13699-5810 (USA).
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15
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Katz E, Pingarrón JM, Mailloux S, Guz N, Gamella M, Melman G, Melman A. Substance Release Triggered by Biomolecular Signals in Bioelectronic Systems. J Phys Chem Lett 2015; 6:1340-1347. [PMID: 26263133 DOI: 10.1021/acs.jpclett.5b00118] [Citation(s) in RCA: 51] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
A new approach to bioelectronic Sense-and-Act systems was developed with the use of modified electrodes performing sensing and substance-releasing functions. The sensing electrode was activated by biomolecular/biological signals ranging from small biomolecules to proteins and bacterial cells. The activated sensing electrode generated reductive potential and current, which stimulated dissolution of an Fe(3+)-cross-linked alginate matrix on the second connected electrode resulting in the release of loaded biochemical species with different functionalities. Drug-mimicking species, antibacterial drugs, and enzymes activating a biofuel cell were released and tested for various biomedical and biotechnological applications. The studied systems offer great versatility for future applications in controlled drug release and personalized medicine. Their future applications in implantable devices with autonomous operation are proposed.
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Affiliation(s)
- Evgeny Katz
- †Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, New York 13699-5810, United States
| | - José M Pingarrón
- ‡Department of Analytical Chemistry, Complutense University of Madrid, 28040 Madrid, Spain
| | - Shay Mailloux
- †Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, New York 13699-5810, United States
| | - Nataliia Guz
- †Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, New York 13699-5810, United States
| | - Maria Gamella
- †Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, New York 13699-5810, United States
- ‡Department of Analytical Chemistry, Complutense University of Madrid, 28040 Madrid, Spain
| | - Galina Melman
- †Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, New York 13699-5810, United States
| | - Artem Melman
- †Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, New York 13699-5810, United States
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16
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Mailloux S, Gerasimova YV, Guz N, Kolpashchikov DM, Katz E. Bridging the Two Worlds: A Universal Interface between Enzymatic and DNA Computing Systems. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201411148] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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17
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Gamella M, Guz N, Pingarrón JM, Aslebagh R, Darie CC, Katz E. A bioelectronic system for insulin release triggered by ketone body mimicking diabetic ketoacidosis in vitro. Chem Commun (Camb) 2015; 51:7618-21. [DOI: 10.1039/c5cc01498k] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
A bioelectronic system was activated with a biomarker of diabetic ketoacidosis to release insulin operating as a Sense-and-Act device.
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Affiliation(s)
- Maria Gamella
- Department of Chemistry and Biomolecular Science
- Clarkson University
- Potsdam
- USA
- Department of Analytical Chemistry
| | - Nataliia Guz
- Department of Chemistry and Biomolecular Science
- Clarkson University
- Potsdam
- USA
| | - José M. Pingarrón
- Department of Analytical Chemistry
- Complutense University of Madrid
- Madrid
- Spain
| | - Roshanak Aslebagh
- Department of Chemistry and Biomolecular Science
- Clarkson University
- Potsdam
- USA
| | - Costel C. Darie
- Department of Chemistry and Biomolecular Science
- Clarkson University
- Potsdam
- USA
| | - Evgeny Katz
- Department of Chemistry and Biomolecular Science
- Clarkson University
- Potsdam
- USA
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18
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Gamella M, Guz N, Mailloux S, Pingarrón JM, Katz E. Antibacterial Drug Release Electrochemically Stimulated by the Presence of Bacterial Cells - Theranostic Approach. ELECTROANAL 2014. [DOI: 10.1002/elan.201400473] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
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19
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Privman V, Domanskyi S, Mailloux S, Holade Y, Katz E. Kinetic Model for a Threshold Filter in an Enzymatic System for Bioanalytical and Biocomputing Applications. J Phys Chem B 2014; 118:12435-43. [DOI: 10.1021/jp508224y] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Affiliation(s)
| | | | | | - Yaovi Holade
- Université de Poitiers, IC2MP, UMR-CNRS 7285, 4 rue Michel Brunet, B27 TSA 51106, 86073 Poitiers Cedex 9, France
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Mailloux S, Guz N, Gamella Carballo M, Pingarrón JM, Katz E. Model system for targeted drug release triggered by immune-specific signals. Anal Bioanal Chem 2014; 406:4825-9. [DOI: 10.1007/s00216-014-7936-z] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2014] [Revised: 05/23/2014] [Accepted: 05/28/2014] [Indexed: 11/25/2022]
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Mailloux S, Guz N, Zakharchenko A, Minko S, Katz E. Majority and minority gates realized in enzyme-biocatalyzed systems integrated with logic networks and interfaced with bioelectronic systems. J Phys Chem B 2014; 118:6775-84. [PMID: 24873717 DOI: 10.1021/jp504057u] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Biocatalytic reactions operating in parallel and resulting in reduction of NAD(+) or oxidation of NADH were used to mimic 3-input majority and minority logic gates, respectively. The substrates corresponding to the enzyme reactions were used as the input signals. When the input signals were applied at their high concentrations, defined as logic 1 input values, the corresponding biocatalytic reactions were activated, resulting in changes of the NADH concentration defined as the output signal. The NADH concentration changes were dependent on the number of parallel reactions activated by the input signals. The absence of the substrates, meaning their logic 0 input values, kept the reactions mute with no changes in the NADH concentration. In the system mimicking the majority function, the enzyme-biocatalyzed reactions resulted in a higher production of NADH when more than one input signal was applied at the logic 1 value. Another system mimicking the minority function consumed more NADH, thus leaving a smaller residual output signal, when more than one input signal was applied at the logic 1 value. The performance of the majority gate was improved by processing the output signal through a filter system in which another biocatalytic reaction consumed a fraction of the output signal, thus reducing its physical value to zero when the logic 0 value was obtained. The majority gate was integrated with a preceding AND logic gate to illustrate the possibility of complex networks. The output signal, NADH, was also used to activate a process mimicking drug release, thus illustrating the use of the majority gate in decision-making biomedical systems. The 3-input majority gate was also used as a switchable AND/OR gate when one of the input signals was reserved as a command signal, switching the logic operation for processing of the other two inputs. Overall, the designed majority and minority logic gates demonstrate novel functions of biomolecular information processing systems.
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Affiliation(s)
- Shay Mailloux
- Department of Chemistry and Biomolecular Science, Clarkson University , Potsdam, New York 13699-5810, United States
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