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Zaytseva EV, Mazhukin DG. Spirocyclic Nitroxides as Versatile Tools in Modern Natural Sciences: From Synthesis to Applications. Part I. Old and New Synthetic Approaches to Spirocyclic Nitroxyl Radicals. Molecules 2021; 26:677. [PMID: 33525514 PMCID: PMC7865516 DOI: 10.3390/molecules26030677] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2020] [Revised: 01/19/2021] [Accepted: 01/25/2021] [Indexed: 12/19/2022] Open
Abstract
Spirocyclic nitroxyl radicals (SNRs) are stable paramagnetics bearing spiro-junction at a-, b-, or g-carbon atom of the nitroxide fragment, which is part of the heterocyclic system. Despite the fact that the first representatives of SNRs were obtained about 50 years ago, the methodology of their synthesis and their usage in chemistry and biochemical applications have begun to develop rapidly only in the last two decades. Due to the presence of spiro-function in the SNRs molecules, the latter have increased stability to various reducing agents (including biogenic ones), while the structures of the biradicals (SNBRs) comprises a rigid spiro-fused core that fixes mutual position and orientation of nitroxide moieties that favors their use in dynamic nuclear polarization (DNP) experiments. This first review on SNRs will give a glance at various strategies for the synthesis of spiro-substituted, mono-, and bis-nitroxides on the base of six-membered (piperidine, 1,2,3,4-tetrahydroquinoline, 9,9'(10H,10H')-spirobiacridine, piperazine, and morpholine) or five-membered (2,5-dihydro-1H-pyrrole, pyrrolidine, 2,5-dihydro-1H-imidazole, 4,5-dihydro-1H-imidazole, imidazolidine, and oxazolidine) heterocyclic cores.
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Affiliation(s)
| | - Dmitrii G. Mazhukin
- Novosibirsk Institute of Organic Chemistry, Siberian Branch of Russian Academy of Sciences (SB RAS), Academician Lavrentiev Ave. 9, 630090 Novosibirsk, Russia;
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Tashiro S, Mitsui S, Burke DW, Kubota R, Matsushita N, Shionoya M. Core–shell metal–macrocycle framework (MMF): spatially selective dye inclusion through core-to-shell anisotropic transport along crystalline 1D-channels connected by epitaxial growth. CrystEngComm 2020. [DOI: 10.1039/d0ce00120a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Abstract
Core–shell porous metal–macrocycle frameworks were fabricated via an epitaxial growth procedure to observe core-to-shell anisotropic transport of a dye.
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Affiliation(s)
- Shohei Tashiro
- Department of Chemistry
- Graduate School of Science
- The University of Tokyo
- Tokyo 113-0033
- Japan
| | - Shinya Mitsui
- Department of Chemistry
- Graduate School of Science
- The University of Tokyo
- Tokyo 113-0033
- Japan
| | - David W. Burke
- Department of Chemistry
- Graduate School of Science
- The University of Tokyo
- Tokyo 113-0033
- Japan
| | - Ryou Kubota
- Department of Chemistry
- Graduate School of Science
- The University of Tokyo
- Tokyo 113-0033
- Japan
| | - Nobuyuki Matsushita
- Department of Chemistry
- College of Science and Research Center for Smart Molecules
- Rikkyo University
- Tokyo 171-8501
- Japan
| | - Mitsuhiko Shionoya
- Department of Chemistry
- Graduate School of Science
- The University of Tokyo
- Tokyo 113-0033
- Japan
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3
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A Guide to and Review of the Use of Multiwavelength Raman Spectroscopy for Characterizing Defective Aromatic Carbon Solids: from Graphene to Amorphous Carbons. COATINGS 2017. [DOI: 10.3390/coatings7100153] [Citation(s) in RCA: 109] [Impact Index Per Article: 15.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
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Ysacco C, Giorgi M, Tordo P, Bardelang D, Ouari O. Dinitroxide biradical crystals with polar order. CAN J CHEM 2015. [DOI: 10.1139/cjc-2014-0596] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
A dinitroxide biradical (dCdO) has the peculiar tendency to crystallize in non-centrosymmetric polar space groups either as a stable dichloromethane solvate or as a pure phase. The molecules arrange with no compensation of their dipolar moment resulting in net macroscopic polar order.
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Affiliation(s)
- Cédric Ysacco
- Aix-Marseille Université, CNRS, Institut de Chimie Radicalaire, UMR 7273, 13013 Marseille, France
| | - Michel Giorgi
- Aix-Marseille Université, CNRS, Spectropole, FR 1739, 13013 Marseille, France
| | - Paul Tordo
- Aix-Marseille Université, CNRS, Institut de Chimie Radicalaire, UMR 7273, 13013 Marseille, France
| | - David Bardelang
- Aix-Marseille Université, CNRS, Institut de Chimie Radicalaire, UMR 7273, 13013 Marseille, France
| | - Olivier Ouari
- Aix-Marseille Université, CNRS, Institut de Chimie Radicalaire, UMR 7273, 13013 Marseille, France
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5
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Bardelang D, Casano G, Poulhès F, Karoui H, Filippini J, Rockenbauer A, Rosas R, Monnier V, Siri D, Gaudel-Siri A, Ouari O, Tordo P. Spin Exchange Monitoring of the Strong Positive Homotropic Allosteric Binding of a Tetraradical by a Synthetic Receptor in Water. J Am Chem Soc 2014; 136:17570-7. [DOI: 10.1021/ja509586k] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- David Bardelang
- Aix-Marseille Université, CNRS, Institut de Chimie Radicalaire, UMR 7273, 13397 Marseille, France
| | - Gilles Casano
- Aix-Marseille Université, CNRS, Institut de Chimie Radicalaire, UMR 7273, 13397 Marseille, France
| | - Florent Poulhès
- Aix-Marseille Université, CNRS, Institut de Chimie Radicalaire, UMR 7273, 13397 Marseille, France
| | - Hakim Karoui
- Aix-Marseille Université, CNRS, Institut de Chimie Radicalaire, UMR 7273, 13397 Marseille, France
| | - Jessica Filippini
- Aix-Marseille Université, CNRS, Institut de Chimie Radicalaire, UMR 7273, 13397 Marseille, France
| | - Antal Rockenbauer
- Department of Physics, Budapest University of Technology and Economics and MTA-BME Condensed Matter Research Group, Budafoki ut 8, 1111 Budapest, Hungary
| | - Roselyne Rosas
- Aix-Marseille Université, CNRS, Spectropole, FR 1739, 13013 Marseille, France
| | - Valérie Monnier
- Aix-Marseille Université, CNRS, Spectropole, FR 1739, 13013 Marseille, France
| | - Didier Siri
- Aix-Marseille Université, CNRS, Institut de Chimie Radicalaire, UMR 7273, 13397 Marseille, France
| | - Anouk Gaudel-Siri
- Aix-Marseille Université, CNRS, Institut de Chimie Radicalaire, UMR 7273, 13397 Marseille, France
| | - Olivier Ouari
- Aix-Marseille Université, CNRS, Institut de Chimie Radicalaire, UMR 7273, 13397 Marseille, France
| | - Paul Tordo
- Aix-Marseille Université, CNRS, Institut de Chimie Radicalaire, UMR 7273, 13397 Marseille, France
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Mao J, Akhmetzyanov D, Ouari O, Denysenkov V, Corzilius B, Plackmeyer J, Tordo P, Prisner TF, Glaubitz C. Host-guest complexes as water-soluble high-performance DNP polarizing agents. J Am Chem Soc 2013; 135:19275-81. [PMID: 24279469 DOI: 10.1021/ja409840y] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Dynamic nuclear polarization (DNP) enhances the sensitivity of solid-state NMR (SSNMR) spectroscopy by orders of magnitude and, therefore, opens possibilities for novel applications from biology to materials science. This multitude of opportunities implicates a need for high-performance polarizing agents, which integrate specific physical and chemical features tailored for various applications. Here, we demonstrate that for the biradical bTbK in complex with captisol (CAP), a β-cyclodextrin derivative, host-guest assembling offers a new and easily accessible approach for the development of new polarizing agents. In contrast to bTbK, the CAP-bTbK complex is water-soluble and shows significantly improved DNP performance compared to the commonly used DNP agent TOTAPOL. Furthermore, NMR and EPR data reveal improved electron and nuclear spin relaxation properties for bTbK within the host molecule. The numerous possibilities to functionalize host molecules will permit designing novel radical complexes targeting diverse applications.
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Affiliation(s)
- Jiafei Mao
- Institutes of Biophysical Chemistry, ‡Physical and Theoretical Chemistry and §Center for Biomolecular Magnetic Resonance BMRZ, Goethe University Frankfurt , 60438 Frankfurt/M., Germany
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Palmer B, Le Comte A, Harris KD, Guillaume F. Controlling spatial distributions of molecules in multicomponent organic crystals, with quantitative mapping by confocal Raman microspectrometry. J Am Chem Soc 2013; 135:14512-5. [PMID: 24004273 PMCID: PMC3876744 DOI: 10.1021/ja406866a] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2013] [Indexed: 01/31/2023]
Abstract
We report four experimental strategies for controlling the three-dimensional arrangement of molecules in multicomponent organic crystals, exploiting confocal Raman microspectrometry to quantify the three-dimensional spatial distributions. Specifically, we focus on controlling the distribution of two types of guest molecule in solid organic inclusion compounds to produce composite core-shell crystals, crystals with a homogeneous distribution of the components, crystals with continuous compositional variation from the core to the surface, and crystals with alternating shells of the components. In this context, confocal Raman microspectrometry is particularly advantageous over optical microscopy as it is nondestructive, offers micrometric spatial resolution, and relies only on the component molecules having different vibrational properties.
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Affiliation(s)
- Benjamin
A. Palmer
- School
of Chemistry, Cardiff University, Park Place, Cardiff CF10 3AT, Wales
| | - Annaïg Le Comte
- School
of Chemistry, Cardiff University, Park Place, Cardiff CF10 3AT, Wales
| | - Kenneth D.M. Harris
- School
of Chemistry, Cardiff University, Park Place, Cardiff CF10 3AT, Wales
| | - François Guillaume
- Groupe
Spectroscopie
Moleculaire, ISM, Université de Bordeaux I, UMR CNRS 5255, 33405 Talence Cedex, France
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