1
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Wang R, Xu H, Banerjee A, Cui Z, Ma Y, Whittingham WG, Yang P, Li A. Mild Approach to Nucleoside Analogues via Photoredox/Cu-Catalyzed Decarboxylative C-N Bond Formation. Total Synthesis of Oxetanocin A. Org Lett 2024; 26:2691-2696. [PMID: 38011311 DOI: 10.1021/acs.orglett.3c00914] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2023]
Abstract
The conventional N-glycosylation methods for nucleoside synthesis usually require strongly acidic or basic conditions. Here we report the decarboxylative C(sp3)-N coupling of glycosyl N-hydroxyphthalimide esters with nucleobases via dual photoredox/Cu catalysis, which offered a mild approach to nucleoside analogues. A total synthesis of oxetanocin A, an antiviral natural product containing an oxetanose moiety, has been achieved by using this method.
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Affiliation(s)
- Ruonan Wang
- College of Chemistry and Henan Institute of Advanced Technology, Zhengzhou University, 100 Science Avenue, Zhengzhou 450001, China
- State Key Laboratory of Chemical Biology, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Lingling Road, Shanghai 200032, China
| | - Hao Xu
- State Key Laboratory of Chemical Biology, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Lingling Road, Shanghai 200032, China
| | - Arpan Banerjee
- State Key Laboratory of Chemical Biology, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Lingling Road, Shanghai 200032, China
| | - Zhongwen Cui
- College of Chemistry and Henan Institute of Advanced Technology, Zhengzhou University, 100 Science Avenue, Zhengzhou 450001, China
- State Key Laboratory of Chemical Biology, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Lingling Road, Shanghai 200032, China
| | - Yuyong Ma
- State Key Laboratory of Chemical Biology, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Lingling Road, Shanghai 200032, China
| | - William G Whittingham
- Jealott's Hill International Research Centre, Syngenta Limited, Bracknell, Berkshire RG42 6EY, United Kingdom
| | - Peng Yang
- College of Chemistry and Henan Institute of Advanced Technology, Zhengzhou University, 100 Science Avenue, Zhengzhou 450001, China
| | - Ang Li
- State Key Laboratory of Chemical Biology, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Lingling Road, Shanghai 200032, China
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2
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Desai SP, Yatzoglou G, Turner JA, Taylor MS. Boronic Acid-Catalyzed Regio- and Stereoselective N-Glycosylations of Purines and Other Azole Heterocycles: Access to Nucleoside Analogues. J Am Chem Soc 2024; 146:4973-4984. [PMID: 38330907 DOI: 10.1021/jacs.3c14434] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/10/2024]
Abstract
In the presence of an arylboronic acid catalyst, azole-type heterocycles, including purines, tetrazoles, triazoles, indazoles, and benzo-fused congeners, undergo regio- and stereoselective N-glycosylations with furanosyl and pyranosyl trichloroacetimidate donors. The protocol, which does not require stoichiometric activators, specialized leaving groups, or drying agents, provides access to nucleoside analogues and enables late-stage N-glycosylation of azole-containing pharmaceutical agents. A mechanism involving simultaneous activation of the glycosyl donor and acceptor by the organoboron catalyst has been proposed, supported by kinetic analysis and computational modeling.
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Affiliation(s)
- Shrey P Desai
- Department of Chemistry, University of Toronto, 80 St. George Street, Toronto, Ontario M5S 3H6, Canada
| | - Giorgos Yatzoglou
- Department of Chemistry, University of Toronto, 80 St. George Street, Toronto, Ontario M5S 3H6, Canada
| | - Julia A Turner
- Department of Chemistry, University of Toronto, 80 St. George Street, Toronto, Ontario M5S 3H6, Canada
| | - Mark S Taylor
- Department of Chemistry, University of Toronto, 80 St. George Street, Toronto, Ontario M5S 3H6, Canada
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3
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Wang H, Zhong YY, Xiao YC, Chen FE. Chemical and chemoenzymatic stereoselective synthesis of β-nucleosides and their analogues. Org Chem Front 2022. [DOI: 10.1039/d1qo01936h] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
β-Nucleosides are fundamental building blocks of biological systems that are widely used as therapeutic agents for treating cancer and viral infections among others. In the last two years, nucleoside analogues...
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4
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Cao Y, Zhou M, Mao RZ, Zou Y, Xia F, Liu DK, Liu J, Li Q, Xiong DC, Ye XS. Visible-light-promoted 3,5-dimethoxyphenyl glycoside activation and glycosylation. Chem Commun (Camb) 2021; 57:10899-10902. [PMID: 34590634 DOI: 10.1039/d1cc04473g] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
A new glycosylation method promoted by visible light with 3,5-dimethoxyphenyl glycoside as the donor was developed. This protocol delivers both O-glycosides and N-glycosides in moderate to excellent yields using a wide range of O-nucleophiles and nucleobases as the glycosyl acceptors.
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Affiliation(s)
- Yafei Cao
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing 100191, China.
| | - Minmin Zhou
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing 100191, China. .,School of Chemical Engineering, Dalian University of Technology, Dalian 116024, Liaoning, China
| | - Run-Ze Mao
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing 100191, China.
| | - You Zou
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing 100191, China.
| | - Feng Xia
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing 100191, China.
| | - Da-Ke Liu
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing 100191, China.
| | - Jianhui Liu
- School of Chemical Engineering, Dalian University of Technology, Dalian 116024, Liaoning, China
| | - Qin Li
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing 100191, China.
| | - De-Cai Xiong
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing 100191, China. .,State Key Laboratory of Pharmaceutical Biotechnology, Nanjing University, Nanjing 210023, Jiangsu, China
| | - Xin-Shan Ye
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing 100191, China.
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5
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Su X, Dohle W, Mills SJ, Watt JM, Rossi AM, Taylor CW, Potter BVL. Inositol Adenophostin: Convergent Synthesis of a Potent Agonist of d- myo-Inositol 1,4,5-Trisphosphate Receptors. ACS OMEGA 2020; 5:28793-28811. [PMID: 33195933 PMCID: PMC7659177 DOI: 10.1021/acsomega.0c04145] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/27/2020] [Accepted: 10/08/2020] [Indexed: 06/11/2023]
Abstract
d-myo-Inositol 1,4,5-trisphosphate receptors (IP3Rs) are Ca2+ channels activated by the intracellular messenger inositol 1,4,5-trisphosphate (IP3, 1). The glyconucleotide adenophostin A (AdA, 2) is a potent agonist of IP3Rs. A recent synthesis of d-chiro-inositol adenophostin (InsAdA, 5) employed suitably protected chiral building blocks and replaced the d-glucose core by d-chiro-inositol. An alternative approach to fully chiral material is now reported using intrinsic sugar chirality to avoid early isomer resolution, involving the coupling of a protected and activated racemic myo-inositol derivative to a d-ribose derivative. Diastereoisomer separation was achieved after trans-isopropylidene group removal and the absolute ribose-inositol conjugate stereochemistry assigned with reference to the earlier synthesis. Optimization of stannylene-mediated regiospecific benzylation was explored using the model 1,2-O-isopropylidene-3,6-di-O-benzyl-myo-inositol and conditions successfully transferred to one conjugate diastereoisomer with 3:1 selectivity. However, only roughly 1:1 regiospecificity was achieved on the required diastereoisomer. The conjugate regioisomers of benzyl derivatives 39 and 40 were successfully separated and 39 was transformed subsequently to InsAdA after amination, pan-phosphorylation, and deprotection. InsAdA from this synthetic route bound with greater affinity than AdA to IP3R1 and was more potent in releasing Ca2+ from intracellular stores through IP3Rs. It is the most potent full agonist of IP3R1 known and .equipotent with material from the fully chiral synthetic route.
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Affiliation(s)
- Xiangdong Su
- Medicinal
Chemistry & Drug Discovery, Department of Pharmacology, University of Oxford, Mansfield Road, Oxford OX1 3QT, U.K.
| | - Wolfgang Dohle
- Medicinal
Chemistry & Drug Discovery, Department of Pharmacology, University of Oxford, Mansfield Road, Oxford OX1 3QT, U.K.
| | - Stephen J. Mills
- Medicinal
Chemistry & Drug Discovery, Department of Pharmacology, University of Oxford, Mansfield Road, Oxford OX1 3QT, U.K.
| | - Joanna M. Watt
- Medicinal
Chemistry & Drug Discovery, Department of Pharmacology, University of Oxford, Mansfield Road, Oxford OX1 3QT, U.K.
- Wolfson
Laboratory of Medicinal Chemistry, Department of Pharmacy and Pharmacology, University of Bath, Claverton Down, Bath BA2 7AY, U.K.
| | - Ana M. Rossi
- Department
of Pharmacology, University of Cambridge, Tennis Court Road, Cambridge CB2 1PD, U.K.
| | - Colin W. Taylor
- Department
of Pharmacology, University of Cambridge, Tennis Court Road, Cambridge CB2 1PD, U.K.
| | - Barry V. L. Potter
- Medicinal
Chemistry & Drug Discovery, Department of Pharmacology, University of Oxford, Mansfield Road, Oxford OX1 3QT, U.K.
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6
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Zhang W, Wang J, Serianni AS, Pan Q. A convenient synthesis of short-chain α-(1 → 2) mannopyranosyl oligosaccharides. Carbohydr Res 2020; 489:107897. [PMID: 32092558 PMCID: PMC7191533 DOI: 10.1016/j.carres.2019.107897] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2019] [Revised: 12/05/2019] [Accepted: 12/16/2019] [Indexed: 11/21/2022]
Abstract
Sugar 1,2-orthoesters are by-products of chemical glycosylation reactions that can be subsequently rearranged in situ to give trans glycosides. They have been used as donors in the synthesis of the latter glycosides with good regio- and stereo-selectivity. Alkyl α-(1 → 2) linked mannopyranosyl disaccharides have been reported as the major products from the rearrangement of mannopyranosyl orthoesters. Recent studies in this laboratory have shown that α-(1 → 2) linked mannopyranosyl di-, tri- and tetrasaccharides can be obtained in one step from mannopyranosyl allyl orthoester under optimized reaction conditions. In addition to the expected mono- and disaccharides (56%), allyl 2,3,4,6-tetra-O-acetyl-α-d-mannopyranosyl-(1 → 2)-3,4,6-tri-O-acetyl-α-d-mannopyranosyl-(1 → 2)-tri-O-acetyl-α-d-mannopyranoside and allyl 2,3,4,6-tetra-O-acetyl-α-d-mannopyranosyl-(1 → 2)-3,4,6-tri-O-acetyl-α-d-mannopyranosyl-(1 → 2)-3,4,6-tri-O-acetyl-α-d-mannopyranosyl-(1 → 2)-3,4,6-tri-O-acetyl-α-d-mannopyranoside were obtained in 23% and 6% isolated yields, respectively, from the oligomerization of a β-d-mannopyranosyl allyl 1,2-orthoester, along with small amounts of higher DP oligomers. Possible mechanisms for the oligomerization and side reactions are proposed based on NMR and mass spectrometric data.
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Affiliation(s)
- Wenhui Zhang
- Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN, 46556-5670, USA
| | - Jun Wang
- Omicron Biochemicals, Inc., 115 South Hill Street, South Bend, IN, 46617-2701, USA
| | - Anthony S Serianni
- Omicron Biochemicals, Inc., 115 South Hill Street, South Bend, IN, 46617-2701, USA; Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN, 46556-5670, USA
| | - Qingfeng Pan
- Omicron Biochemicals, Inc., 115 South Hill Street, South Bend, IN, 46617-2701, USA.
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7
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Dohle W, Su X, Mills SJ, Rossi A, Taylor CW, Potter BVL. A synthetic cyclitol-nucleoside conjugate polyphosphate is a highly potent second messenger mimic. Chem Sci 2019; 10:5382-5390. [PMID: 31171961 PMCID: PMC6540904 DOI: 10.1039/c9sc00445a] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2019] [Accepted: 04/23/2019] [Indexed: 12/11/2022] Open
Abstract
Reactions that form sec-sec ethers are well known, but few lead to compounds with dense functionality around the O-linkage. Replacement of the α-glucopyranosyl unit of adenophostin A, a potent d-myo-inositol 1,4,5-trisphosphate (IP3R) agonist, with a d-chiro-inositol surrogate acting substantially as a pseudosugar, leads to "d-chiro-inositol adenophostin". At its core, this cyclitol-nucleoside trisphosphate comprises a nucleoside sugar linked via an axial d-chiro-inositol 1-hydroxyl-adenosine 3'-ribose ether linkage. A divergent synthesis of d-chiro-inositol adenophostin has been achieved. Key features of the synthetic strategy to produce a triol for phosphorylation include a new selective mono-tosylation of racemic 1,2:4,5-di-O-isopropylidene-myo-inositol using tosyl imidazole; subsequent conversion of the product into separable camphanate ester derivatives, one leading to a chiral myo-inositol triflate used as a synthetic building block and the other to l-5-O-methyl-myo-inositol [l-(+)-bornesitol] to assign the absolute configuration; the nucleophilic coupling of an alkoxide of a ribose pent-4-ene orthoester unit with a structurally rigid chiral myo-inositol triflate derivative, representing the first sec-sec ether formation between a cyclitol and ribose. Reaction of the coupled product with a silylated nucleobase completes the assembly of the core structure. Further protecting group manipulation, mixed O- and N-phosphorylation, and subsequent removal of all protecting groups in a single step achieves the final product, avoiding a separate N6 protection/deprotection strategy. d-chiro-Inositol adenophostin evoked Ca2+ release through IP3Rs at lower concentrations than adenophostin A, hitherto the most potent known agonist of IP3Rs.
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Affiliation(s)
- Wolfgang Dohle
- Medicinal Chemistry & Drug Discovery
, Department of Pharmacology
, University of Oxford
,
Mansfield Road
, Oxford
, OX1 3QT
, UK
.
; Tel: +44-1865-271945
| | - Xiangdong Su
- Medicinal Chemistry & Drug Discovery
, Department of Pharmacology
, University of Oxford
,
Mansfield Road
, Oxford
, OX1 3QT
, UK
.
; Tel: +44-1865-271945
| | - Stephen J. Mills
- Medicinal Chemistry & Drug Discovery
, Department of Pharmacology
, University of Oxford
,
Mansfield Road
, Oxford
, OX1 3QT
, UK
.
; Tel: +44-1865-271945
| | - Ana M. Rossi
- Department of Pharmacology
, University of Cambridge
,
Tennis Court Road
, Cambridge
, CB2 1PD
, UK
| | - Colin W. Taylor
- Department of Pharmacology
, University of Cambridge
,
Tennis Court Road
, Cambridge
, CB2 1PD
, UK
| | - Barry V. L. Potter
- Medicinal Chemistry & Drug Discovery
, Department of Pharmacology
, University of Oxford
,
Mansfield Road
, Oxford
, OX1 3QT
, UK
.
; Tel: +44-1865-271945
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8
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Modulation of the stereoselectivity and reactivity of glycosylation via ( p -Tol) 2 SO/Tf 2 O preactivation strategy: From O -, C -sialylation to general O -, N -glycosylation. CHINESE CHEM LETT 2018. [DOI: 10.1016/j.cclet.2017.09.034] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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9
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Rao BV, Manmode S, Hotha S. Propargyl 1,2-Orthoesters for a Catalytic and Stereoselective Synthesis of Pyrimidine Nucleosides. J Org Chem 2015; 80:1499-505. [DOI: 10.1021/jo502413z] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Affiliation(s)
- Boddu Venkateswara Rao
- Department of Chemistry, Indian Institute of Science Education & Research, Pune 411 021, India
| | - Sujit Manmode
- Department of Chemistry, Indian Institute of Science Education & Research, Pune 411 021, India
| | - Srinivas Hotha
- Department of Chemistry, Indian Institute of Science Education & Research, Pune 411 021, India
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10
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Liu GJ, Zhang XT, Xing GW. A general method for N-glycosylation of nucleobases promoted by (p-Tol)2SO/Tf2O with thioglycoside as donor. Chem Commun (Camb) 2015; 51:12803-6. [DOI: 10.1039/c5cc03617h] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
35 nucleosides were synthesized by coupling thioglycosides with pyrimidines and purines under the preactivation of (p-Tol)2SO/Tf2O in high yields and with β-stereoselectivities.
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Affiliation(s)
- Guang-jian Liu
- Department of Chemistry
- Beijing Normal University
- Beijing 100875
- China
| | - Xiao-tai Zhang
- Department of Chemistry
- Beijing Normal University
- Beijing 100875
- China
| | - Guo-wen Xing
- Department of Chemistry
- Beijing Normal University
- Beijing 100875
- China
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