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Weigel RK, Rangamani A, Alabi CA. Synthetically encoded complementary oligomers. Nat Rev Chem 2023; 7:875-888. [PMID: 37973830 DOI: 10.1038/s41570-023-00556-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 10/19/2023] [Indexed: 11/19/2023]
Abstract
Creating the next generation of advanced materials will require controlling molecular architecture to a degree typically achieved only in biopolymers. Sequence-defined polymers take inspiration from biology by using chain length and monomer sequence as handles for tuning structure and function. These sequence-defined polymers can assemble into discrete structures, such as molecular duplexes, via reversible interactions between functional groups. Selectivity can be attained by tuning the monomer sequence, thereby creating the need for chemical platforms that can produce sequence-defined polymers at scale. Developing sequence-defined polymers that are specific for their complementary sequence and achieve their desired binding strengths is critical for producing increasingly complex structures for new functional materials. In this Review Article, we discuss synthetic platforms that produce sequence-defined, duplex-forming oligomers of varying length, strength and association mode, and highlight several analytical techniques used to characterize their hybridization.
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Affiliation(s)
- R Kenton Weigel
- Robert F. Smith School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, NY, USA
| | - Adithya Rangamani
- Robert F. Smith School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, NY, USA
| | - Christopher A Alabi
- Robert F. Smith School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, NY, USA.
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2
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Rathnayaka RMC, George S, Abeysinghe JP, Lynch VM, Gross DE. Synthetic, spectroscopic, and computational investigations of readily accessible 2‐phenyl‐3‐alkylbenzoxazaboroles. J Heterocycl Chem 2022. [DOI: 10.1002/jhet.4442] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
| | - Sobiya George
- Department of Chemistry Sam Houston State University Huntsville Texas United States
| | - Janaka P. Abeysinghe
- Department of Chemistry Sam Houston State University Huntsville Texas United States
| | - Vincent M. Lynch
- Department of Chemistry The University of Texas at Austin Austin Texas United States
| | - Dustin E. Gross
- Department of Chemistry Sam Houston State University Huntsville Texas United States
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3
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Drogkaris V, Northrop BH. Discrete boronate ester ladders from the dynamic covalent self-assembly of oligo(phenylene ethynylene) derivatives and phenylenebis(boronic acid). Org Chem Front 2020. [DOI: 10.1039/d0qo00083c] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
Reversible boronate ester chemistry enables the controlled, dynamic self-assembly of olig(phenylene ethynylene)s into highly conjugated ladder frameworks.
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4
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Lokugama SD, Garcia NA, Manankandayalage CP, Nguyen TN, Abeysinghe JP, Gross DE. Self-assembly of rectangular shape-persistent diazaborole-linked macrocycles. J INCL PHENOM MACRO 2019. [DOI: 10.1007/s10847-018-00878-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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5
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Kawahata M, Matsuura M, Tominaga M, Katagiri K, Yamaguchi K. Hydrogen-bonded structures from adamantane-based catechols. J Mol Struct 2018. [DOI: 10.1016/j.molstruc.2018.03.011] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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6
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Kombala CJ, Ekanayake DI, Gross DE. Boron trifluoride facilitated transesterification of dioxaborolanes. Tetrahedron Lett 2017. [DOI: 10.1016/j.tetlet.2017.08.052] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
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7
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Cruz‐Huerta J, Campillo‐Alvarado G, Höpfl H, Rodríguez‐Cuamatzi P, Reyes‐Márquez V, Guerrero‐Álvarez J, Salazar‐Mendoza D, Farfán‐García N. Self‐Assembly of Triphenylboroxine and the Phenylboronic Ester of Pentaerythritol with Piperazine,
trans
‐1,4‐Diaminocyclohexane, and 4‐Aminopyridine. Eur J Inorg Chem 2015. [DOI: 10.1002/ejic.201501121] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Affiliation(s)
- Jorge Cruz‐Huerta
- Centro de Investigaciones Químicas, Instituto de Investigación en Ciencias Básicas e Aplicadas, Universidad Autónoma del Estado de Morelos, Av. Universidad 1001, Chamilpa, Cuernavaca 62209, Morelos, México
| | - Gonzalo Campillo‐Alvarado
- Centro de Investigaciones Químicas, Instituto de Investigación en Ciencias Básicas e Aplicadas, Universidad Autónoma del Estado de Morelos, Av. Universidad 1001, Chamilpa, Cuernavaca 62209, Morelos, México
| | - Herbert Höpfl
- Centro de Investigaciones Químicas, Instituto de Investigación en Ciencias Básicas e Aplicadas, Universidad Autónoma del Estado de Morelos, Av. Universidad 1001, Chamilpa, Cuernavaca 62209, Morelos, México
| | - Patricia Rodríguez‐Cuamatzi
- Centro de Investigaciones Químicas, Instituto de Investigación en Ciencias Básicas e Aplicadas, Universidad Autónoma del Estado de Morelos, Av. Universidad 1001, Chamilpa, Cuernavaca 62209, Morelos, México
| | - Viviana Reyes‐Márquez
- Centro de Investigaciones Químicas, Instituto de Investigación en Ciencias Básicas e Aplicadas, Universidad Autónoma del Estado de Morelos, Av. Universidad 1001, Chamilpa, Cuernavaca 62209, Morelos, México
| | - Jorge Guerrero‐Álvarez
- Centro de Investigaciones Químicas, Instituto de Investigación en Ciencias Básicas e Aplicadas, Universidad Autónoma del Estado de Morelos, Av. Universidad 1001, Chamilpa, Cuernavaca 62209, Morelos, México
| | - Domingo Salazar‐Mendoza
- Universidad Tecnológica de la Mixteca, Carretera a Acatlima Km 2.5, Huajuapan de León 69000, Oaxaca, México
| | - Norberto Farfán‐García
- Facultad de Química, Departamento Química Orgánica, Universidad Nacional Autónoma de México, Cd. Universitaria, Coyoacán, México 04510, México
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8
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Boyd DR, Sharma ND, Berberian MV, Cleij M, Hardacre C, Ljubez V, McConville G, Stevenson PJ, Kulakov LA, Allen CCR. Arenecis-Diol Dehydrogenase-Catalysed Regio- and Stereoselective Oxidation of Arene-, Cycloalkane- and Cycloalkene-cis-diols to Yield Catechols and Chiral α-Ketols. Adv Synth Catal 2015. [DOI: 10.1002/adsc.201500189] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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9
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Smith MK, Goldberg AR, Northrop BH. The Dynamic Assembly of Covalent Organic Polygons: Finding the Optimal Balance of Solubility, Functionality, and Stability. European J Org Chem 2015. [DOI: 10.1002/ejoc.201500170] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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10
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Reddy ER, Trivedi R, Sarma AVS, Sridhar B, Anantaraju HS, Sriram D, Yogeeswari P, Nagesh N. Sugar-boronate ester scaffold tethered pyridyl-imine palladium(ii) complexes: synthesis and their in vitro anticancer evaluation. Dalton Trans 2015; 44:17600-16. [DOI: 10.1039/c5dt03266k] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
The anticancer activity of sugar-boronate ester containing palladium(ii) complexes is reported.
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Affiliation(s)
- Eda Rami Reddy
- Inorganic and Physical Chemistry Division
- CSIR-IICT
- Hyderabad-500007
- India
| | - Rajiv Trivedi
- Inorganic and Physical Chemistry Division
- CSIR-IICT
- Hyderabad-500007
- India
| | | | | | | | - Dharmarajan Sriram
- Department of Pharmacy
- Birla Institute of Technology & Science – Pilani
- Hyderabad 500 078
- India
| | - Perumal Yogeeswari
- Department of Pharmacy
- Birla Institute of Technology & Science – Pilani
- Hyderabad 500 078
- India
| | - Narayana Nagesh
- CSIR-Centre for Cellular and Molecular Biology
- Hyderabad-500 007
- India
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11
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Martínez-Aguirre MA, del Campo JM, Escalante-Tovar S, Yatsimirsky AK. Self-assembly and recognition properties of a tetraanionic macrocyclic boronate ester in aqueous medium. RSC Adv 2015. [DOI: 10.1039/c5ra03291a] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023] Open
Abstract
A tetraanionic [2 + 2] boronate ester macrocycle is self-assembled in water containing 0–5% vol DMSO and binds efficiently various cationic guests including R4N+ cations, choline, acetylcholine, 1-methylnicotinamide and an alkaloid berberine.
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Affiliation(s)
| | - Jorge M. del Campo
- Facultad de Química
- Universidad Nacional Autónoma de México
- 04510 México D.F
- Mexico
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12
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Huang SL, Jin GX, Luo HK, Hor TSA. Engineering Organic Macrocycles and Cages: Versatile Bonding Approaches. Chem Asian J 2014; 10:24-42. [DOI: 10.1002/asia.201402634] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2014] [Revised: 10/05/2014] [Indexed: 12/12/2022]
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13
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Smith MK, Powers-Riggs NE, Northrop BH. Rational synthesis of bis(hexyloxy)-tetra(hydroxy)-triphenylenes and their derivatives. RSC Adv 2014. [DOI: 10.1039/c4ra06503d] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
The synthesis of three new tetra(hydroxy)-triphenylene derivatives and their use as platforms for rationally designed, mixed-substituent triphenylene derivatives is described.
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Affiliation(s)
- Merry K. Smith
- Department of Chemistry
- Wesleyan University
- Middletown, USA
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