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Jin XY, He YM, Hui TH, Liu L, Cheng L. Selective Methylation of Nucleosides via an In Situ Generated Methyl Oxonium. J Org Chem 2024; 89:3597-3604. [PMID: 38356389 DOI: 10.1021/acs.joc.3c02578] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/16/2024]
Abstract
A very mild and efficient procedure has been developed for the preparation of N-methylated uridine, pseudouridine, guanosine and inosine derivatives. This process was compatible with free hydroxyls within the ribose and did not require precautions on the protection or deprotection of other functionalities. The key to this extremely mild methylation without protection relied on the in situ generated methyl oxonium from the Wittig reagent and methanol. A putative mechanism for the selective methylation was also proposed.
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Affiliation(s)
- Xiao-Yang Jin
- Beijing National Laboratory for Molecular Sciences (BNLMS), CAS Key Laboratory of Molecular Recognition and Function, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
| | - Yin-Ming He
- Beijing National Laboratory for Molecular Sciences (BNLMS), CAS Key Laboratory of Molecular Recognition and Function, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Tian-He Hui
- Beijing National Laboratory for Molecular Sciences (BNLMS), CAS Key Laboratory of Molecular Recognition and Function, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
- Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Hangzhou 310024, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Li Liu
- Beijing National Laboratory for Molecular Sciences (BNLMS), CAS Key Laboratory of Molecular Recognition and Function, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Liang Cheng
- Beijing National Laboratory for Molecular Sciences (BNLMS), CAS Key Laboratory of Molecular Recognition and Function, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
- Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Hangzhou 310024, China
- University of Chinese Academy of Sciences, Beijing 100049, China
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2
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Zhou Q, Li K, Liu YH, Li LL, Yu KK, Zhang H, Yu XQ. Fluorescent Wittig reagent as a novel ratiometric probe for the quantification of 5-formyluracil and its application in cell imaging. Chem Commun (Camb) 2018; 54:13722-13725. [DOI: 10.1039/c8cc07541g] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
For the first time a Wittig reagent was introduced into the design of a fluorescent probe for the quantification of 5-formyluracil.
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Affiliation(s)
- Qian Zhou
- Key Laboratory of Green Chemistry and Technology (Ministry of Education), College of Chemistry, Sichuan University
- Chengdu 610064
- P. R. China
| | - Kun Li
- Key Laboratory of Green Chemistry and Technology (Ministry of Education), College of Chemistry, Sichuan University
- Chengdu 610064
- P. R. China
| | - Yan-Hong Liu
- Key Laboratory of Green Chemistry and Technology (Ministry of Education), College of Chemistry, Sichuan University
- Chengdu 610064
- P. R. China
| | - Ling-Ling Li
- Key Laboratory of Green Chemistry and Technology (Ministry of Education), College of Chemistry, Sichuan University
- Chengdu 610064
- P. R. China
| | - Kang-Kang Yu
- Key Laboratory of Green Chemistry and Technology (Ministry of Education), College of Chemistry, Sichuan University
- Chengdu 610064
- P. R. China
| | - Hong Zhang
- Key Laboratory of Green Chemistry and Technology (Ministry of Education), College of Chemistry, Sichuan University
- Chengdu 610064
- P. R. China
| | - Xiao-Qi Yu
- Key Laboratory of Green Chemistry and Technology (Ministry of Education), College of Chemistry, Sichuan University
- Chengdu 610064
- P. R. China
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3
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Xu J, Chen A, Burkett B, Ng QH, Chan KP. Synthesis of phosphine oxide based amphiphilic molecules via ring-opening Wittig olefination of a macrocyclic phosphoranylidene and their property study as non-ionic surfactants. RSC Adv 2018; 8:20406-20410. [PMID: 35541675 PMCID: PMC9080798 DOI: 10.1039/c8ra03324b] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2018] [Accepted: 05/25/2018] [Indexed: 11/24/2022] Open
Abstract
A novel ring-opening Wittig olefination approach was developed for the synthesis of amphiphilic phosphine oxides (PO) as non-ionic surfactants. The approach concurrently introduces the crucial functional groups (lipophilic chain and phosphine oxide moiety) present in the known PO surfactants and additional hydrophilic group (i.e., ethylene glycol units) in one step via Wittig olefination of a macrocyclic phosphoranylidene. A series of novel PO compounds were obtained from a variety of aldehydes and selected compounds were examined for their physiochemical properties (surface tension, critical micelle concentration and interfacial tension) and also for their abilities to form emulsions as non-ionic surfactants. A novel ring-opening Wittig olefination approach was developed for the synthesis of amphiphilic phosphine oxides (PO) as non-ionic surfactants.![]()
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Affiliation(s)
- Jin Xu
- Organic Chemistry
- Institute of Chemical and Engineering Sciences (ICES)
- A*STAR
- Singapore
| | - Anqi Chen
- Organic Chemistry
- Institute of Chemical and Engineering Sciences (ICES)
- A*STAR
- Singapore
| | - Brendan Burkett
- Organic Chemistry
- Institute of Chemical and Engineering Sciences (ICES)
- A*STAR
- Singapore
| | - Qi Hua Ng
- Polymer Engineering & Characterisation
- Institute of Chemical and Engineering Sciences (ICES)
- A*STAR
- Jurong Island
- Singapore
| | - Kok Ping Chan
- Organic Chemistry
- Institute of Chemical and Engineering Sciences (ICES)
- A*STAR
- Singapore
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4
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Purushottam L, Adusumalli SR, Chilamari M, Rai V. Chemoselective and site-selective peptide and native protein modification enabled by aldehyde auto-oxidation. Chem Commun (Camb) 2017; 53:959-962. [DOI: 10.1039/c6cc09555k] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Chemical technology delivers precision engineering of the native protein backbone. A lysine residue undergoes single-site formylation or acylation in a multi-step yet operationally simple one-pot process.
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Affiliation(s)
- Landa Purushottam
- Organic and Bioconjugate Chemistry Laboratory
- Department of Chemistry
- Indian Institute of Science Education and Research Bhopal
- Bhauri
- Bhopal 462066
| | - Srinivasa Rao Adusumalli
- Organic and Bioconjugate Chemistry Laboratory
- Department of Chemistry
- Indian Institute of Science Education and Research Bhopal
- Bhauri
- Bhopal 462066
| | - Maheshwerreddy Chilamari
- Organic and Bioconjugate Chemistry Laboratory
- Department of Chemistry
- Indian Institute of Science Education and Research Bhopal
- Bhauri
- Bhopal 462066
| | - Vishal Rai
- Organic and Bioconjugate Chemistry Laboratory
- Department of Chemistry
- Indian Institute of Science Education and Research Bhopal
- Bhauri
- Bhopal 462066
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5
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Triana V, Derda R. Tandem Wittig/Diels–Alder diversification of genetically encoded peptide libraries. Org Biomol Chem 2017; 15:7869-7877. [DOI: 10.1039/c7ob01635b] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
In this paper, we developed a tandem of two carbon–carbon bond-forming reactions to chemically diversify libraries of peptides displayed on a bacteriophage.
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Affiliation(s)
- Vivian Triana
- Department of Chemistry
- University of Alberta
- Edmonton
- Canada
| | - Ratmir Derda
- Department of Chemistry
- University of Alberta
- Edmonton
- Canada
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6
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Spears RJ, Fascione MA. Site-selective incorporation and ligation of protein aldehydes. Org Biomol Chem 2016; 14:7622-38. [DOI: 10.1039/c6ob00778c] [Citation(s) in RCA: 69] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
The incorporation of aldehyde handles into proteins, and subsequent chemical reactions thereof, is rapidly proving to be an effective way of generating homogeneous, covalently linked protein constructs that can display a vast array of functionality.
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7
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Affiliation(s)
- Omar Boutureira
- Departament de Química Analítica i Química Orgànica, Universitat Rovira i Virgili , C/Marcel·lí Domingo s/n, 43007 Tarragona, Spain
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8
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Abstract
Ylide [4 + 1] annulation: beyond small-ring formation.
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Affiliation(s)
- Chunyin Zhu
- School of Chemistry and Chemical Engineering
- Jiangsu University
- Zhenjiang 212013
- P. R. China
| | - Ya Ding
- School of Chemistry and Chemical Engineering
- Jiangsu University
- Zhenjiang 212013
- P. R. China
| | - Long-Wu Ye
- Department of Chemistry and Fujian Provincial Key Laboratory of Chemical Biology
- College of Chemistry and Chemical Engineering
- Xiamen University
- Xiamen 361005
- P. R. China
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9
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Werner T, Hoffmann M, Deshmukh S. First Enantioselective Catalytic Wittig Reaction. European J Org Chem 2014. [DOI: 10.1002/ejoc.201402941] [Citation(s) in RCA: 52] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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10
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Patterson DM, Nazarova LA, Prescher JA. Finding the right (bioorthogonal) chemistry. ACS Chem Biol 2014; 9:592-605. [PMID: 24437719 DOI: 10.1021/cb400828a] [Citation(s) in RCA: 534] [Impact Index Per Article: 48.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Bioorthogonal chemistries can be used to tag diverse classes of biomolecules in cells and other complex environments. With over 20 unique transformations now available, though, selecting an appropriate reaction for a given experiment is challenging. In this article, we compare and contrast the most common classes of bioorthogonal chemistries and provide a framework for matching the reactions with downstream applications. We also discuss ongoing efforts to identify novel biocompatible reactions and methods to control their reactivity. The continued expansion of the bioorthogonal toolkit will provide new insights into biomolecule networks and functions and thus refine our understanding of living systems.
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Affiliation(s)
- David M. Patterson
- Departments of †Chemistry, ‡Molecular Biology & Biochemistry, and §Pharmaceutical Sciences, University of California, Irvine, California 92697, United States
| | - Lidia A. Nazarova
- Departments of †Chemistry, ‡Molecular Biology & Biochemistry, and §Pharmaceutical Sciences, University of California, Irvine, California 92697, United States
| | - Jennifer A. Prescher
- Departments of †Chemistry, ‡Molecular Biology & Biochemistry, and §Pharmaceutical Sciences, University of California, Irvine, California 92697, United States
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