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Ozaki Y, Beć KB, Morisawa Y, Yamamoto S, Tanabe I, Huck CW, Hofer TS. Advances, challenges and perspectives of quantum chemical approaches in molecular spectroscopy of the condensed phase. Chem Soc Rev 2021; 50:10917-10954. [PMID: 34382961 DOI: 10.1039/d0cs01602k] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The purpose of this review is to demonstrate advances, challenges and perspectives of quantum chemical approaches in molecular spectroscopy of the condensed phase. Molecular spectroscopy, particularly vibrational spectroscopy and electronic spectroscopy, has been used extensively for a wide range of areas of chemical sciences and materials science as well as nano- and biosciences because it provides valuable information about structure, functions, and reactions of molecules. In the meantime, quantum chemical approaches play crucial roles in the spectral analysis. They also yield important knowledge about molecular and electronic structures as well as electronic transitions. The combination of spectroscopic approaches and quantum chemical calculations is a powerful tool for science, in general. Thus, our article, which treats various spectroscopy and quantum chemical approaches, should have strong implications in the wider scientific community. This review covers a wide area of molecular spectroscopy from far-ultraviolet (FUV, 120-200 nm) to far-infrared (FIR, 400-10 cm-1)/terahertz and Raman spectroscopy. As quantum chemical approaches, we introduce several anharmonic approaches such as vibrational self-consistent field (VSCF) and the combination of periodic harmonic calculations with anharmonic corrections based on finite models, grid-based techniques like the Numerov approach, the Cartesian coordinate tensor transfer (CCT) method, Symmetry-Adapted Cluster Configuration-Interaction (SAC-CI), and the ZINDO (Semi-empirical calculations at Zerner's Intermediate Neglect of Differential Overlap). One can use anharmonic approaches and grid-based approaches for both infrared (IR) and near-infrared (NIR) spectroscopy, while CCT methods are employed for Raman, Raman optical activity (ROA), FIR/terahertz and low-frequency Raman spectroscopy. Therefore, this review overviews cross relations between molecular spectroscopy and quantum chemical approaches, and provides various kinds of close-reality advanced spectral simulation for condensed phases.
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Affiliation(s)
- Yukihiro Ozaki
- School of Biological and Environmental Sciences, Kwansei Gakuin University, Sanda, Hyogo 669-1337, Japan. and Toyota Physical and Chemical Research Institute, Yokomichi, Nagakute, Aichi 480-1192, Japan
| | - Krzysztof B Beć
- Institute of Analytical Chemistry and Radiochemistry, University of Innsbruck, Innrain 80/82, 6020 Innsbruck, Austria
| | - Yusuke Morisawa
- Department of Chemistry, School of Science and Engineering, Kindai University, Kowakae, Higashi-Osaka, Osaka 577-8502, Japan
| | - Shigeki Yamamoto
- Department of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | - Ichiro Tanabe
- Department of Materials Engineering Science, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | - Christian W Huck
- Institute of Analytical Chemistry and Radiochemistry, University of Innsbruck, Innrain 80/82, 6020 Innsbruck, Austria
| | - Thomas S Hofer
- Institute of General, Inorganic and Theoretical Chemistry, University of Innsbruck, Innrain 80-82, A6020 Innsbruck, Austria
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Grabska J, Beć KB, Mayr S, Huck CW. Theoretical Simulation of Near-Infrared Spectrum of Piperine: Insight into Band Origins and the Features of Regression Models. APPLIED SPECTROSCOPY 2021; 75:1022-1032. [PMID: 34236925 PMCID: PMC8320572 DOI: 10.1177/00037028211027951] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/22/2021] [Accepted: 06/05/2021] [Indexed: 06/13/2023]
Abstract
We investigated the near-infrared spectrum of piperine using quantum mechanical calculations. We evaluated two efficient approaches, DVPT2//PM6 and DVPT2//ONIOM [PM6:B3LYP/6-311++G(2df, 2pd)] that yielded a simulated spectrum with varying accuracy versus computing time factor. We performed vibrational assignments and unveiled complex nature of the near-infrared spectrum of piperine, resulting from a high level of band convolution. The most meaningful contribution to the near-infrared absorption of piperine results from binary combination bands. With the available detailed near-infrared assignment of piperine, we interpreted the properties of partial least square regression models constructed in our earlier study to describe the piperine content in black pepper samples. Two models were compared with spectral data sets obtained with a benchtop and a miniaturized spectrometer. The two spectrometers implement distinct technology which leads to a profound instrumental difference and discrepancy in the predictive performance when analyzing piperine content. We concluded that the sensitivity of the two instruments to certain types of piperine vibrations is different and that the benchtop spectrometer unveiled higher selectivity. Such difference in obtaining chemical information from a sample can be one of the reasons why the benchtop spectrometer performs better in analyzing the piperine content of black pepper. This evidenced direct correspondence between the features critical for applied near-infrared spectroscopic routine and the underlying vibrational properties of the analyzed constituent in a complex sample.
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Affiliation(s)
| | - Krzysztof B. Beć
- Krzysztof B. Beć, University of Innsbruck, Innrain 80-82, Innsbruck 6020, Austria.
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Beć KB, Grabska J, Huck CW. Current and future research directions in computer-aided near-infrared spectroscopy: A perspective. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2021; 254:119625. [PMID: 33706116 DOI: 10.1016/j.saa.2021.119625] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2020] [Revised: 02/09/2021] [Accepted: 02/09/2021] [Indexed: 06/12/2023]
Abstract
The present review aims to draw a perspective on the vibrational spectroscopy combined with the tools of computational chemistry. This includes an overview of the accomplishments made so far, the assessment of the present development trends and the prospects for continuing these advances. State-of-the-art methods, current challenges and the expected future advances are evaluated from the point-of-view of the practical application in vibrational spectroscopy. A special attention is given to near-infrared (NIR) spectroscopy, which occupies a distinct position among the techniques of vibrational spectroscopy. As the result of intrinsically complex spectra, reliance on the anharmonicity as well as keen interest given to complex materials, NIR spectroscopy may particularly benefit from computational chemistry. The present key limitations hindering development of NIR spectroscopy are identified; these constitute primarily the limit in the treatable system size and the inability to effectively include chemical matrix effects. Given the expanding role of NIR spectroscopy in science and industry, lifting these limitations would directly enhance the general potential of this technique.
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Affiliation(s)
- Krzysztof B Beć
- Institute of Analytical Chemistry and Radiochemistry, Leopold-Franzens University, CCB-Center for Chemistry and Biomedicine, Innrain 80/82, 6020 Innsbruck, Austria
| | - Justyna Grabska
- Institute of Analytical Chemistry and Radiochemistry, Leopold-Franzens University, CCB-Center for Chemistry and Biomedicine, Innrain 80/82, 6020 Innsbruck, Austria.
| | - Christian W Huck
- Institute of Analytical Chemistry and Radiochemistry, Leopold-Franzens University, CCB-Center for Chemistry and Biomedicine, Innrain 80/82, 6020 Innsbruck, Austria
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Lu B, Wu Z, Wang L, Zhu B, Rauhut G, Zeng X. The simplest alkynyl thiocyanate HCCSCN and its isomers. Chem Commun (Camb) 2021; 57:3343-3346. [PMID: 33659974 DOI: 10.1039/d1cc00629k] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
The simplest alkynyl thiocyanate HCCSCN has been synthesized and characterized for the first time. HCCSCN is surprisingly stable at room temperature but undergoes photoisomerization in an Ar-matrix (10 K) to yield the novel sulfenyl isocyanide HCCSNC and thioketene NCC(H)CS. The isomeric isothiocyanate HCCNCS, missing in the photochemistry of HCCSCN, can be generated through the photodecarbonylation of propiolyl isothiocyanate.
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Affiliation(s)
- Bo Lu
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysts and Innovative Materials, Fudan University, Shanghai 200433, China.
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Qin Y, Lu B, Rauhut G, Hagedorn M, Banert K, Song C, Chu X, Wang L, Zeng X. The Simplest, Isolable, Alkynyl Isocyanate HC≡CNCO: Synthesis and Characterization. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201911102] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Yuanyuan Qin
- College of ChemistryChemical Engineering and Materials ScienceSoochow University Suzhou 215123 China
| | - Bo Lu
- College of ChemistryChemical Engineering and Materials ScienceSoochow University Suzhou 215123 China
| | - Guntram Rauhut
- Institute for Theoretical ChemistryUniversity of Stuttgart Pfaffenwaldring 55 Stuttgart 70569 Germany
| | - Manfred Hagedorn
- Chemnitz University of TechnologyOrganic Chemistry Strasse der Nationen 62 Chemnitz 09111 Germany
| | - Klaus Banert
- Chemnitz University of TechnologyOrganic Chemistry Strasse der Nationen 62 Chemnitz 09111 Germany
| | - Chao Song
- College of ChemistryChemical Engineering and Materials ScienceSoochow University Suzhou 215123 China
| | - Xianxu Chu
- College of ChemistryChemical Engineering and Materials ScienceSoochow University Suzhou 215123 China
| | - Lina Wang
- Department of ChemistryFudan University Shanghai 200433 China
| | - Xiaoqing Zeng
- College of ChemistryChemical Engineering and Materials ScienceSoochow University Suzhou 215123 China
- Department of ChemistryFudan University Shanghai 200433 China
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Qin Y, Lu B, Rauhut G, Hagedorn M, Banert K, Song C, Chu X, Wang L, Zeng X. The Simplest, Isolable, Alkynyl Isocyanate HC≡CNCO: Synthesis and Characterization. Angew Chem Int Ed Engl 2019; 58:17277-17281. [PMID: 31553514 DOI: 10.1002/anie.201911102] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2019] [Indexed: 11/08/2022]
Abstract
Alkynyl isocyanates have been postulated as highly reactive intermediates in synthetic chemistry. Herein, the parent molecule HC≡CNCO is isolated for the first time. In sharp contrast to the previously reported short lifetime (ca. 15 s) at room temperature, we found that HC≡CNCO has a lifetime of 55 h in the gas phase (2 mbar, 300 K) with a melting point of -79.5 °C and vaporization enthalpy (ΔHvap ) of 23.1(1) kJ mol-1 . Apart from the IR (gas, solid, and matrix), 1 H and 13 C NMR, and UV/Vis spectroscopic characterization, its photoisomerization with a acylnitrene HC≡CC(O)N and cyanoketene NCC(H)CO has been observed.
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Affiliation(s)
- Yuanyuan Qin
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou, 215123, China
| | - Bo Lu
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou, 215123, China
| | - Guntram Rauhut
- Institute for Theoretical Chemistry, University of Stuttgart, Pfaffenwaldring 55, Stuttgart, 70569, Germany
| | - Manfred Hagedorn
- Chemnitz University of Technology, Organic Chemistry, Strasse der Nationen 62, Chemnitz, 09111, Germany
| | - Klaus Banert
- Chemnitz University of Technology, Organic Chemistry, Strasse der Nationen 62, Chemnitz, 09111, Germany
| | - Chao Song
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou, 215123, China
| | - Xianxu Chu
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou, 215123, China
| | - Lina Wang
- Department of Chemistry, Fudan University, Shanghai, 200433, China
| | - Xiaoqing Zeng
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou, 215123, China.,Department of Chemistry, Fudan University, Shanghai, 200433, China
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Puzzarini C, Bloino J, Tasinato N, Barone V. Accuracy and Interpretability: The Devil and the Holy Grail. New Routes across Old Boundaries in Computational Spectroscopy. Chem Rev 2019; 119:8131-8191. [DOI: 10.1021/acs.chemrev.9b00007] [Citation(s) in RCA: 114] [Impact Index Per Article: 22.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- Cristina Puzzarini
- Dipartimento di Chimica “Giacomo Ciamician”, Università di Bologna, Via F. Selmi 2, I-40126 Bologna, Italy
| | - Julien Bloino
- Scuola Normale Superiore, Piazza dei Cavalieri 7, I-56126 Pisa, Italy
| | - Nicola Tasinato
- Scuola Normale Superiore, Piazza dei Cavalieri 7, I-56126 Pisa, Italy
| | - Vincenzo Barone
- Scuola Normale Superiore, Piazza dei Cavalieri 7, I-56126 Pisa, Italy
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Beć KB, Huck CW. Breakthrough Potential in Near-Infrared Spectroscopy: Spectra Simulation. A Review of Recent Developments. Front Chem 2019; 7:48. [PMID: 30854368 PMCID: PMC6396078 DOI: 10.3389/fchem.2019.00048] [Citation(s) in RCA: 94] [Impact Index Per Article: 18.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2018] [Accepted: 01/18/2019] [Indexed: 11/29/2022] Open
Abstract
Near-infrared (12,500–4,000 cm−1; 800–2,500 nm) spectroscopy is the hallmark for one of the most rapidly advancing analytical techniques over the last few decades. Although it is mainly recognized as an analytical tool, near-infrared spectroscopy has also contributed significantly to physical chemistry, e.g., by delivering invaluable data on the anharmonic nature of molecular vibrations or peculiarities of intermolecular interactions. In all these contexts, a major barrier in the form of an intrinsic complexity of near-infrared spectra has been encountered. A large number of overlapping vibrational contributions influenced by anharmonic effects create complex patterns of spectral dependencies, in many cases hindering our comprehension of near-infrared spectra. Quantum mechanical calculations commonly serve as a major support to infrared and Raman studies; conversely, near-infrared spectroscopy has long been hindered in this regard due to practical limitations. Advances in anharmonic theories in hyphenation with ever-growing computer technology have enabled feasible theoretical near-infrared spectroscopy in recent times. Accordingly, a growing number of quantum mechanical investigations aimed at near-infrared region has been witnessed. The present review article summarizes these most recent accomplishments in the emerging field. Applications of generalized approaches, such as vibrational self-consistent field and vibrational second order perturbation theories as well as their derivatives, and dense grid-based studies of vibrational potential, are overviewed. Basic and applied studies are discussed, with special attention paid to the ones which aim at improving analytical spectroscopy. A remarkable potential arises from the growing applicability of anharmonic computations to solving the problems which arise in both basic and analytical near-infrared spectroscopy. This review highlights an increased value of quantum mechanical calculations to near-infrared spectroscopy in relation to other kinds of vibrational spectroscopy.
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Affiliation(s)
- Krzysztof B Beć
- Center for Chemistry and Biomedicine, Institute of Analytical Chemistry and Radiochemistry, Leopold-Franzens University, Innsbruck, Austria
| | - Christian W Huck
- Center for Chemistry and Biomedicine, Institute of Analytical Chemistry and Radiochemistry, Leopold-Franzens University, Innsbruck, Austria
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Al-Huniti MH, Sullivan ZB, Stanley JL, Carson JA, Hyatt IFD, Hairston AC, Croatt MP. Hypervalent Iodonium Alkynyl Triflate Generated Phenylcyanocarbene and Its Reactivity with Aromatic Systems. J Org Chem 2017; 82:11772-11780. [PMID: 28841312 DOI: 10.1021/acs.joc.7b01608] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Phenylcyanocarbene was generated by the reaction of azide with a hypervalent iodonium alkynyl triflate and reacted in situ with 21 different carbocyclic and heterocyclic aromatic compounds. These reactions led to more complex products that frequently underwent subsequent rearrangements. The reactivity was further explored in a mechanistic study to ascertain the chemoselectivity and stereospecificity.
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Affiliation(s)
- Mohammed H Al-Huniti
- Department of Chemistry and Biochemistry, University of North Carolina at Greensboro , 435 Sullivan Science Building, Greensboro, North Carolina 27402, United States
| | - Zachary B Sullivan
- Department of Chemistry and Biochemistry, University of North Carolina at Greensboro , 435 Sullivan Science Building, Greensboro, North Carolina 27402, United States
| | - Jarrod L Stanley
- Department of Chemistry and Biochemistry, University of North Carolina at Greensboro , 435 Sullivan Science Building, Greensboro, North Carolina 27402, United States
| | - James A Carson
- Department of Chemistry and Biochemistry, University of North Carolina at Greensboro , 435 Sullivan Science Building, Greensboro, North Carolina 27402, United States
| | - I F Dempsey Hyatt
- Department of Chemistry, Adelphi University , 1 South Avenue, Garden City, New York 11530, United States
| | - A Christina Hairston
- Department of Chemistry and Biochemistry, University of North Carolina at Greensboro , 435 Sullivan Science Building, Greensboro, North Carolina 27402, United States
| | - Mitchell P Croatt
- Department of Chemistry and Biochemistry, University of North Carolina at Greensboro , 435 Sullivan Science Building, Greensboro, North Carolina 27402, United States
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Synthesis, Characterization and Reactions of (Azidoethynyl)trimethylsilane. Molecules 2015; 20:21328-35. [PMID: 26633330 PMCID: PMC6332308 DOI: 10.3390/molecules201219770] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2015] [Revised: 11/20/2015] [Accepted: 11/23/2015] [Indexed: 11/17/2022] Open
Abstract
Synthesis of azido(trimethylsilyl)acetylene (6) was performed by treating the iodonium salt 5 with highly soluble hexadecyltributylphosphonium azide (QN3) at −40 °C. Although this product is very unstable, it can nevertheless be trapped by the click reaction with cyclooctyne to give the corresponding 1,2,3-triazole, and also directly characterized by 1H- and 13C-NMR data as well as IR-spectra, which were measured in solution at low temperature and in the gas phase. The thermal or photochemical decay of azide 6 leads to cyano(trimethylsilyl)carbene. This is demonstrated not only by quantum chemical calculations, but also by the trapping reactions with the help of isobutene.
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Banert K, Hagedorn M, Pester T, Siebert N, Staude C, Tchernook I, Rathmann K, Hollóczki O, Friedrich J. Rearrangement Reactions of Tritylcarbenes: Surprising Ring Expansion and Computational Investigation. Chemistry 2015; 21:14911-23. [DOI: 10.1002/chem.201501352] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2015] [Indexed: 11/11/2022]
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Perrin A, Flores Antognini A, Zeng X, Beckers H, Willner H, Rauhut G. Vibrational Spectrum and Gas-Phase Structure of Disulfur Dinitride (S2N2). Chemistry 2014; 20:10323-31. [DOI: 10.1002/chem.201402404] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2014] [Indexed: 11/08/2022]
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Zeng X, Beckers H, Seifert J, Banert K. The Photochemical and Thermal Decomposition of Azidoacetylene in the Gas Phase, Solid Matrix, and Solutions. European J Org Chem 2014. [DOI: 10.1002/ejoc.201402153] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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