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Li YY, Wang XY, Li HJ, Chen JY, Kou YH, Li X, Wang Y. Theoretical study on the mechanism of water oxidation catalyzed by a mononuclear copper complex: important roles of a redox non-innocent ligand and HPO 4 2- anion. RSC Adv 2023; 13:8352-8359. [PMID: 36926005 PMCID: PMC10011972 DOI: 10.1039/d3ra00648d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Accepted: 02/25/2023] [Indexed: 03/16/2023] Open
Abstract
The water oxidation reaction is the bottleneck problem of the artificial photosynthetic system. In this work, the mechanism of water oxidation catalyzed by a mononuclear copper complex in alkaline conditions was studied by density functional calculations. Firstly, a water molecule coordinating with the copper center of the complex (Cuii, 1) generates Cuii-H2O (2). 2 undergoes two proton-coupled electron transfer processes to produce intermediate (4). The oxidation process occurs mainly on the ligand moiety, and 4 (˙L-Cuii-O˙) can be described as a Cuii center interacting with a ligand radical antiferromagnetically and an oxyl radical ferromagnetically. 4 is the active species that can trigger O-O bond formation via the water nucleophilic attack mechanism. This process occurs in a step-wise manner. The attacking water transfers one of the protons to the HPO4 2- coupled with an electron transfer to the ligand radical, which generates a transient OH˙ interacting with the oxyl radical and H2PO4 -. Then the O-O bond is formed through the direct coupling of the oxo radical and the OH radical. The triplet di-oxygen could be released after two oxidation processes. According to the Gibbs free energy diagram, the O-O bond formation was suggested to be the rate-limiting step with a calculated total barrier of 19.5 kcal mol-1. More importantly, the copper complex catalyzing water oxidation with the help of a redox non-innocent ligand and HPO4 2- was emphasized.
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Affiliation(s)
- Ying-Ying Li
- School of Chemistry and Chemical Engineering, Zhengzhou Normal University Zhengzhou 450044 China
| | - Xiao-Yan Wang
- School of Chemistry and Chemical Engineering, Zhengzhou Normal University Zhengzhou 450044 China
| | - Hui-Ji Li
- School of Chemistry and Chemical Engineering, Zhengzhou Normal University Zhengzhou 450044 China
| | - Jia-Yi Chen
- Key Laboratory of Material Chemistry for Energy Conversion and Storage, Ministry of Education, Hubei Key Laboratory of Bioinorganic Chemistry and Materia Medica, Hubei Key Laboratory of Materials Chemistry and Service Failure, School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology Wuhan 430074 P. R. China
| | - Yao-Hua Kou
- School of Chemistry and Chemical Engineering, Zhengzhou Normal University Zhengzhou 450044 China
| | - Xiao Li
- School of Chemistry and Chemical Engineering, Zhengzhou Normal University Zhengzhou 450044 China
| | - Yaping Wang
- School of Chemistry and Chemical Engineering, Zhengzhou Normal University Zhengzhou 450044 China
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2
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Vitillo JG, Cramer CJ, Gagliardi L. Multireference Methods are Realistic and Useful Tools for Modeling Catalysis. Isr J Chem 2022. [DOI: 10.1002/ijch.202100136] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Affiliation(s)
- Jenny G. Vitillo
- Department of Science and High Technology and INSTM Università degli Studi dell'Insubria Via Valleggio 9 I-22100 Como Italy
| | - Christopher J. Cramer
- Underwriters Laboratories Inc. 333 Pfingsten Road Northbrook Illinois 60602 United States
| | - Laura Gagliardi
- Department of Chemistry Pritzker School of Molecular Engineering James Franck Institute University of Chicago Chicago Illinois 60637 United States
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3
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Abstract
We introduce DMRG[FEAST], a new method for optimizing excited-state many-body wave functions with the density matrix renormalization group (DMRG) algorithm. Our approach applies the FEAST algorithm, originally designed for large-scale diagonalization problems, to matrix product state wave functions. We show that DMRG[FEAST] enables the stable optimization of both low- and high-energy eigenstates, therefore overcoming the limitations of state-of-the-art excited-state DMRG algorithms. We demonstrate the reliability of DMRG[FEAST] by calculating anharmonic vibrational excitation energies of molecules with up to 30 fully coupled degrees of freedom.
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Affiliation(s)
- Alberto Baiardi
- ETH Zürich, Laboratorium für Physikalische Chemie, Vladimir-Prelog-Weg 2, 8093 Zürich, Switzerland
| | - Anna Klára Kelemen
- ETH Zürich, Laboratorium für Physikalische Chemie, Vladimir-Prelog-Weg 2, 8093 Zürich, Switzerland
| | - Markus Reiher
- ETH Zürich, Laboratorium für Physikalische Chemie, Vladimir-Prelog-Weg 2, 8093 Zürich, Switzerland
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4
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Khedkar A, Roemelt M. Modern multireference methods and their application in transition metal chemistry. Phys Chem Chem Phys 2021; 23:17097-17112. [PMID: 34355719 DOI: 10.1039/d1cp02640b] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Transition metal chemistry is a challenging playground for quantum chemical methods owing to the simultaneous presence of static and dynamic electron correlation effects in many systems. Wavefunction based multireference (MR) methods constitute a physically sound and systematically improvable Ansatz to deal with this complexity but suffer from some conceptual difficulties and high computational costs. The latter problem partially arises from the unfavorable scaling of the Full Configuration Interaction (Full-CI) problem which in the majority of MR methods is solved for a subset of the molecular orbital space, the so-called active space. In the last years multiple methods such as modern variants of selected CI, Full-CI Quantum Monte Carlo (FCIQMC) and the density matrix renormalization group (DMRG) have been developed that solve the Full-CI problem approximately for a fraction of the computational cost required by conventional techniques thereby significantly extending the range of applicability of modern MR methods. This perspective review outlines recent advancements in the field of MR electronic structure methods together with the resulting chances and challenges for theoretical studies in the field of transition metal chemistry. In light of its emerging importance a special focus is put on the selection of adequate active spaces and the concomitant development of numerous selection aides in recent years.
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Affiliation(s)
- Abhishek Khedkar
- Lehrstuhl für theoretische Chemie, Ruhr-Universität Bochum, D-44780 Bochum, Germany.
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5
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Han R, Luber S. Complete active space analysis of a reaction pathway: Investigation of the oxygen–oxygen bond formation. J Comput Chem 2020; 41:1586-1597. [DOI: 10.1002/jcc.26201] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2019] [Revised: 02/21/2020] [Accepted: 03/21/2020] [Indexed: 12/17/2022]
Affiliation(s)
- Ruocheng Han
- Institut für Chemie, Universität Zürich Zürich Switzerland
| | - Sandra Luber
- Institut für Chemie, Universität Zürich Zürich Switzerland
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6
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Gaggioli CA, Stoneburner SJ, Cramer CJ, Gagliardi L. Beyond Density Functional Theory: The Multiconfigurational Approach To Model Heterogeneous Catalysis. ACS Catal 2019. [DOI: 10.1021/acscatal.9b01775] [Citation(s) in RCA: 53] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Affiliation(s)
- Carlo Alberto Gaggioli
- Department of Chemistry, Chemical Theory Center and Supercomputing Institute, University of Minnesota, 207 Pleasant Street SE, Minneapolis, Minnesota 55455-0431, United States
| | - Samuel J. Stoneburner
- Department of Chemistry, Chemical Theory Center and Supercomputing Institute, University of Minnesota, 207 Pleasant Street SE, Minneapolis, Minnesota 55455-0431, United States
| | - Christopher J. Cramer
- Department of Chemistry, Chemical Theory Center and Supercomputing Institute, University of Minnesota, 207 Pleasant Street SE, Minneapolis, Minnesota 55455-0431, United States
| | - Laura Gagliardi
- Department of Chemistry, Chemical Theory Center and Supercomputing Institute, University of Minnesota, 207 Pleasant Street SE, Minneapolis, Minnesota 55455-0431, United States
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7
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Roemelt M, Pantazis DA. Multireference Approaches to Spin‐State Energetics of Transition Metal Complexes Utilizing the Density Matrix Renormalization Group. ADVANCED THEORY AND SIMULATIONS 2019. [DOI: 10.1002/adts.201800201] [Citation(s) in RCA: 33] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Michael Roemelt
- Lehrstuhl für Theoretische ChemieRuhr‐Universität Bochum 44780 Bochum Germany
- Max‐Planck‐Institut für Kohlenforschung Kaiser‐Wilhelm‐Platz 1 45470 Mülheim an der Ruhr Germany
| | - Dimitrios A. Pantazis
- Max‐Planck‐Institut für Kohlenforschung Kaiser‐Wilhelm‐Platz 1 45470 Mülheim an der Ruhr Germany
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Schilling M, Luber S. Computational Modeling of Cobalt-Based Water Oxidation: Current Status and Future Challenges. Front Chem 2018; 6:100. [PMID: 29721491 PMCID: PMC5915471 DOI: 10.3389/fchem.2018.00100] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2018] [Accepted: 03/20/2018] [Indexed: 12/19/2022] Open
Abstract
A lot of effort is nowadays put into the development of novel water oxidation catalysts. In this context, mechanistic studies are crucial in order to elucidate the reaction mechanisms governing this complex process, new design paradigms and strategies how to improve the stability and efficiency of those catalysts. This review is focused on recent theoretical mechanistic studies in the field of homogeneous cobalt-based water oxidation catalysts. In the first part, computational methodologies and protocols are summarized and evaluated on the basis of their applicability toward real catalytic or smaller model systems, whereby special emphasis is laid on the choice of an appropriate model system. In the second part, an overview of mechanistic studies is presented, from which conceptual guidelines are drawn on how to approach novel studies of catalysts and how to further develop the field of computational modeling of water oxidation reactions.
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Affiliation(s)
- Mauro Schilling
- Department of Chemistry, University of Zürich, Zurich, Switzerland
| | - Sandra Luber
- Department of Chemistry, University of Zürich, Zurich, Switzerland
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Roemelt M, Krewald V, Pantazis DA. Exchange Coupling Interactions from the Density Matrix Renormalization Group and N-Electron Valence Perturbation Theory: Application to a Biomimetic Mixed-Valence Manganese Complex. J Chem Theory Comput 2017; 14:166-179. [PMID: 29211960 DOI: 10.1021/acs.jctc.7b01035] [Citation(s) in RCA: 44] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
The accurate description of magnetic level energetics in oligonuclear exchange-coupled transition-metal complexes remains a formidable challenge for quantum chemistry. The density matrix renormalization group (DMRG) brings such systems for the first time easily within reach of multireference wave function methods by enabling the use of unprecedentedly large active spaces. But does this guarantee systematic improvement in predictive ability and, if so, under which conditions? We identify operational parameters in the use of DMRG using as a test system an experimentally characterized mixed-valence bis-μ-oxo/μ-acetato Mn(III,IV) dimer, a model for the oxygen-evolving complex of photosystem II. A complete active space of all metal 3d and bridge 2p orbitals proved to be the smallest meaningful starting point; this is readily accessible with DMRG and greatly improves on the unrealistic metal-only configuration interaction or complete active space self-consistent field (CASSCF) values. Orbital optimization is critical for stabilizing the antiferromagnetic state, while a state-averaged approach over all spin states involved is required to avoid artificial deviations from isotropic behavior that are associated with state-specific calculations. Selective inclusion of localized orbital subspaces enables probing the relative contributions of different ligands and distinct superexchange pathways. Overall, however, full-valence DMRG-CASSCF calculations fall short of providing a quantitative description of the exchange coupling owing to insufficient recovery of dynamic correlation. Quantitatively accurate results can be achieved through a DMRG implementation of second order N-electron valence perturbation theory (NEVPT2) in conjunction with a full-valence metal and ligand active space. Perspectives for future applications of DMRG-CASSCF/NEVPT2 to exchange coupling in oligonuclear clusters are discussed.
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Affiliation(s)
- Michael Roemelt
- Lehrstuhl für Theoretische Chemie, Ruhr-University Bochum , 44780 Bochum, Germany.,Max Planck Institute for Coal Research, Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany
| | - Vera Krewald
- Department of Chemistry, University of Bath , Bath BA2 7AY, United Kingdom
| | - Dimitrios A Pantazis
- Max Planck Institute for Chemical Energy Conversion, Stiftstraße 34-36, 45470 Mülheim an der Ruhr, Germany
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10
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Phung QM, Wouters S, Pierloot K. Cumulant Approximated Second-Order Perturbation Theory Based on the Density Matrix Renormalization Group for Transition Metal Complexes: A Benchmark Study. J Chem Theory Comput 2016; 12:4352-61. [DOI: 10.1021/acs.jctc.6b00714] [Citation(s) in RCA: 78] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Affiliation(s)
- Quan Manh Phung
- Department
of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium
| | - Sebastian Wouters
- Center
for Molecular Modelling, Ghent University, Technologiepark 903, 9052 Zwijnaarde, Belgium
| | - Kristine Pierloot
- Department
of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium
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11
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Roemelt M, Guo S, Chan GKL. A projected approximation to strongly contracted N-electron valence perturbation theory for DMRG wavefunctions. J Chem Phys 2016; 144:204113. [DOI: 10.1063/1.4950757] [Citation(s) in RCA: 41] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Michael Roemelt
- Frick Laboratory, Department of Chemistry, Princeton University, Princeton, New Jersey 08544, USA
- Lehrstuhl für Theoretische Chemie, Ruhr-Universität Bochum, D-44789 Bochum, Germany
- Max-Planck Institut für Kohlenforschung, Kaiser-Wilhelm Platz 1, D-45470 Mülheim an der Ruhr, Germany
| | - Sheng Guo
- Frick Laboratory, Department of Chemistry, Princeton University, Princeton, New Jersey 08544, USA
| | - Garnet K.-L. Chan
- Frick Laboratory, Department of Chemistry, Princeton University, Princeton, New Jersey 08544, USA
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12
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Insight into Metal-Catalyzed Water Oxidation from a DFT Perspective. ADVANCES IN ORGANOMETALLIC CHEMISTRY 2016. [DOI: 10.1016/bs.adomc.2016.01.001] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/04/2022]
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13
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Saitow M, Kurashige Y, Yanai T. Fully Internally Contracted Multireference Configuration Interaction Theory Using Density Matrix Renormalization Group: A Reduced-Scaling Implementation Derived by Computer-Aided Tensor Factorization. J Chem Theory Comput 2015; 11:5120-31. [DOI: 10.1021/acs.jctc.5b00270] [Citation(s) in RCA: 59] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Masaaki Saitow
- The Graduate University for Advanced Studies, Myodaiji, Okazaki, Aichi 444-8585, Japan
| | - Yuki Kurashige
- The Graduate University for Advanced Studies, Myodaiji, Okazaki, Aichi 444-8585, Japan
- Department
of Theoretical and Computational Molecular Science, Institute for Molecular Science, Okazaki, Aichi 444-8585, Japan
- Japan Science and Technology Agency, PRESTO, 4-1-8 Honcho, Kawaguchi, Saitama 332-0012, Japan
| | - Takeshi Yanai
- The Graduate University for Advanced Studies, Myodaiji, Okazaki, Aichi 444-8585, Japan
- Department
of Theoretical and Computational Molecular Science, Institute for Molecular Science, Okazaki, Aichi 444-8585, Japan
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14
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Roemelt M. Spin orbit coupling for molecular ab initio density matrix renormalization group calculations: Application to g-tensors. J Chem Phys 2015; 143:044112. [DOI: 10.1063/1.4927432] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Michael Roemelt
- Lehrstuhl für Theoretische Chemie, Ruhr-Universität Bochum, D-44780 Bochum, Germany and Max-Planck Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany
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15
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Affiliation(s)
- James D. Blakemore
- Department of Chemistry and
Energy Sciences Institute, Yale University, P.O. Box 208107, New Haven, Connecticut 06520-8107, United States
| | - Robert H. Crabtree
- Department of Chemistry and
Energy Sciences Institute, Yale University, P.O. Box 208107, New Haven, Connecticut 06520-8107, United States
| | - Gary W. Brudvig
- Department of Chemistry and
Energy Sciences Institute, Yale University, P.O. Box 208107, New Haven, Connecticut 06520-8107, United States
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16
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Wouters S, Bogaerts T, Van Der Voort P, Van Speybroeck V, Van Neck D. Communication: DMRG-SCF study of the singlet, triplet, and quintet states of oxo-Mn(Salen). J Chem Phys 2015; 140:241103. [PMID: 24985611 DOI: 10.1063/1.4885815] [Citation(s) in RCA: 81] [Impact Index Per Article: 8.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
Abstract
We use CheMPS2, our free open-source spin-adapted implementation of the density matrix renormalization group (DMRG) [S. Wouters, W. Poelmans, P. W. Ayers, and D. Van Neck, Comput. Phys. Commun. 185, 1501 (2014)], to study the lowest singlet, triplet, and quintet states of the oxo-Mn(Salen) complex. We describe how an initial approximate DMRG calculation in a large active space around the Fermi level can be used to obtain a good set of starting orbitals for subsequent complete-active-space or DMRG self-consistent field calculations. This procedure mitigates the need for a localization procedure, followed by a manual selection of the active space. Per multiplicity, the same active space of 28 electrons in 22 orbitals (28e, 22o) is obtained with the 6-31G(*), cc-pVDZ, and ANO-RCC-VDZP basis sets (the latter with DKH2 scalar relativistic corrections). Our calculations provide new insight into the electronic structure of the quintet.
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Affiliation(s)
- Sebastian Wouters
- Center for Molecular Modelling, Ghent University, Technologiepark 903, 9052 Zwijnaarde, Belgium
| | - Thomas Bogaerts
- Center for Molecular Modelling, Ghent University, Technologiepark 903, 9052 Zwijnaarde, Belgium
| | - Pascal Van Der Voort
- Center for Ordered Materials, Organometallics and Catalysis, Ghent University, Krijgslaan 281 (S3), 9000 Gent, Belgium
| | | | - Dimitri Van Neck
- Center for Molecular Modelling, Ghent University, Technologiepark 903, 9052 Zwijnaarde, Belgium
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