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Pokidova OV, Novikova VO, Emel'yanova NS, Kormukhina AY, Kulikov AV, Utenyshev AN, Lazarenko VA, Ovanesyan NS, Starostina AA, Sanina NA. A nitrosyl iron complex with 3.4-dichlorothiophenolyl ligands: synthesis, structures and its reactions with targets - carriers of nitrogen oxide (NO) in vivo. Dalton Trans 2023; 52:2641-2662. [PMID: 36744818 DOI: 10.1039/d2dt04047f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
In this work, a new binuclear nitrosyl complex with 3.4-dichlorothiophenolyl ligands [Fe2(SC6H3Cl2)2(NO)4] has been synthesized. Nitrosyl iron complexes (NICs) are systems for the storage and delivery of NO in the body. There is a dynamic equilibrium between dinitrosyl iron units bound to low molecular weight ligands and high molecular weight (protein) ligands in vivo. From this point of view, the transformation of the studied complex in DMSO and buffer, as well as in biological systems, has been analyzed. In DMSO, it decomposes into mononuclear NICs, which quickly decay in buffer solutions with NO release. The high molecular weight product is formed as a result of the binding of the complex to bovine serum albumin (the Stern-Volmer constant is 2.1 × 105 M-1). In this case, the complex becomes a prolonged NO-donor. Such a long-term effect has been observed for the first time. Similarly, in a system with oxyhemoglobin, NO generation is slower; the UV-vis spectra show a gradual formation of methemoglobin. On the other hand, reduced glutathione has little effect on the NO-donor properties of the complex despite the fact that ligand substitution is observed in the system and a binuclear product is formed. Mucin binds the complex, and the decomposition mechanism is different from that for buffer solutions. Thus, these proteins and glutathione are able to participate in the transformation of the complex and modulate its properties as a potential drug.
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Affiliation(s)
- Olesya V Pokidova
- Federal Research Center of Problems of Chemical Physics and Medicinal Chemistry, Russian Academy of Sciences, prosp. Akad. Semenova, 1., 142432 Chernogolovka, Moscow region, Russian Federation.
| | - Veronika O Novikova
- Federal Research Center of Problems of Chemical Physics and Medicinal Chemistry, Russian Academy of Sciences, prosp. Akad. Semenova, 1., 142432 Chernogolovka, Moscow region, Russian Federation.
| | - Nina S Emel'yanova
- Federal Research Center of Problems of Chemical Physics and Medicinal Chemistry, Russian Academy of Sciences, prosp. Akad. Semenova, 1., 142432 Chernogolovka, Moscow region, Russian Federation.
| | - Alexandra Yu Kormukhina
- Federal Research Center of Problems of Chemical Physics and Medicinal Chemistry, Russian Academy of Sciences, prosp. Akad. Semenova, 1., 142432 Chernogolovka, Moscow region, Russian Federation. .,Faculty of Fundamental Physical and Chemical Engineering, Lomonosov Moscow State University M.V. Lomonosov, Leninskie gory, 1., 119991 Moscow, Russian Federation
| | - Alexander V Kulikov
- Federal Research Center of Problems of Chemical Physics and Medicinal Chemistry, Russian Academy of Sciences, prosp. Akad. Semenova, 1., 142432 Chernogolovka, Moscow region, Russian Federation. .,Faculty of Fundamental Physical and Chemical Engineering, Lomonosov Moscow State University M.V. Lomonosov, Leninskie gory, 1., 119991 Moscow, Russian Federation
| | - Andrey N Utenyshev
- Federal Research Center of Problems of Chemical Physics and Medicinal Chemistry, Russian Academy of Sciences, prosp. Akad. Semenova, 1., 142432 Chernogolovka, Moscow region, Russian Federation.
| | - Vladimir A Lazarenko
- National Research Center 'Kurchatov Institute', pl. Academician Kurchatov, 1, 123182, Moscow, Russian Federation
| | - Nikolai S Ovanesyan
- Federal Research Center of Problems of Chemical Physics and Medicinal Chemistry, Russian Academy of Sciences, prosp. Akad. Semenova, 1., 142432 Chernogolovka, Moscow region, Russian Federation.
| | - Arina A Starostina
- Faculty of Fundamental Physical and Chemical Engineering, Lomonosov Moscow State University M.V. Lomonosov, Leninskie gory, 1., 119991 Moscow, Russian Federation
| | - Natalya A Sanina
- Federal Research Center of Problems of Chemical Physics and Medicinal Chemistry, Russian Academy of Sciences, prosp. Akad. Semenova, 1., 142432 Chernogolovka, Moscow region, Russian Federation. .,Faculty of Fundamental Physical and Chemical Engineering, Lomonosov Moscow State University M.V. Lomonosov, Leninskie gory, 1., 119991 Moscow, Russian Federation.,Scientific and Educational Center "Medical Chemistry", Moscow State Regional Pedagogical University, st. Vera Voloshina, 24, 141014 Mytishchi, Moscow Region, Russian Federation
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Synthesis, structure and antibacterial activity of dinitrosyl iron complexes (DNICs) dimers functionalized with 5-(nitrophenyl) -4-H-1,2,4-triazole-3-thiolyls. Polyhedron 2022. [DOI: 10.1016/j.poly.2022.115822] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Lehnert N, Kim E, Dong HT, Harland JB, Hunt AP, Manickas EC, Oakley KM, Pham J, Reed GC, Alfaro VS. The Biologically Relevant Coordination Chemistry of Iron and Nitric Oxide: Electronic Structure and Reactivity. Chem Rev 2021; 121:14682-14905. [PMID: 34902255 DOI: 10.1021/acs.chemrev.1c00253] [Citation(s) in RCA: 96] [Impact Index Per Article: 32.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Abstract
Nitric oxide (NO) is an important signaling molecule that is involved in a wide range of physiological and pathological events in biology. Metal coordination chemistry, especially with iron, is at the heart of many biological transformations involving NO. A series of heme proteins, nitric oxide synthases (NOS), soluble guanylate cyclase (sGC), and nitrophorins, are responsible for the biosynthesis, sensing, and transport of NO. Alternatively, NO can be generated from nitrite by heme- and copper-containing nitrite reductases (NIRs). The NO-bearing small molecules such as nitrosothiols and dinitrosyl iron complexes (DNICs) can serve as an alternative vehicle for NO storage and transport. Once NO is formed, the rich reaction chemistry of NO leads to a wide variety of biological activities including reduction of NO by heme or non-heme iron-containing NO reductases and protein post-translational modifications by DNICs. Much of our understanding of the reactivity of metal sites in biology with NO and the mechanisms of these transformations has come from the elucidation of the geometric and electronic structures and chemical reactivity of synthetic model systems, in synergy with biochemical and biophysical studies on the relevant proteins themselves. This review focuses on recent advancements from studies on proteins and model complexes that not only have improved our understanding of the biological roles of NO but also have provided foundations for biomedical research and for bio-inspired catalyst design in energy science.
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Affiliation(s)
- Nicolai Lehnert
- Department of Chemistry and Department of Biophysics, University of Michigan, Ann Arbor, Michigan 48109-1055, United States
| | - Eunsuk Kim
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, United States
| | - Hai T Dong
- Department of Chemistry and Department of Biophysics, University of Michigan, Ann Arbor, Michigan 48109-1055, United States
| | - Jill B Harland
- Department of Chemistry and Department of Biophysics, University of Michigan, Ann Arbor, Michigan 48109-1055, United States
| | - Andrew P Hunt
- Department of Chemistry and Department of Biophysics, University of Michigan, Ann Arbor, Michigan 48109-1055, United States
| | - Elizabeth C Manickas
- Department of Chemistry and Department of Biophysics, University of Michigan, Ann Arbor, Michigan 48109-1055, United States
| | - Kady M Oakley
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, United States
| | - John Pham
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, United States
| | - Garrett C Reed
- Department of Chemistry and Department of Biophysics, University of Michigan, Ann Arbor, Michigan 48109-1055, United States
| | - Victor Sosa Alfaro
- Department of Chemistry and Department of Biophysics, University of Michigan, Ann Arbor, Michigan 48109-1055, United States
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Tung CY, Tseng YT, Lu TT, Liaw WF. Insight into the Electronic Structure of Biomimetic Dinitrosyliron Complexes (DNICs): Toward the Syntheses of Amido-Bridging Dinuclear DNICs. Inorg Chem 2021; 60:15846-15873. [PMID: 34009960 DOI: 10.1021/acs.inorgchem.1c00566] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The ubiquitous function of nitric oxide (NO) guided the biological discovery of the natural dinitrosyliron unit (DNIU) [Fe(NO)2] as an intermediate/end product after Fe nitrosylation of nonheme cofactors. Because of the natural utilization of this cofactor for the biological storage and delivery of NO, a bioinorganic study of synthetic dinitrosyliron complexes (DNICs) has been extensively explored in the last 2 decades. The bioinorganic study of DNICs involved the development of synthetic methodology, spectroscopic discrimination, biological application of NO-delivery reactivity, and translational application to the (catalytic) transformation of small molecules. In this Forum Article, we aim to provide a systematic review of spectroscopic and computational insights into the bonding nature within the DNIU [Fe(NO)2] and the electronic structure of different types of DNICs, which highlights the synchronized advance in synthetic methodology and spectroscopic tools. With regard to the noninnocent nature of a NO ligand, spectroscopic and computational tools were utilized to provide qualitative/quantitative assignment of oxidation states of Fe and NO in DNICs with different redox levels and ligation modes as well as to probe the Fe-NO bonding interaction modulated by supporting ligands. Besides the strong antiferromagnetic coupling between high-spin Fe and paramagnetic NO ligands within the covalent DNIU [Fe(NO)2], in polynuclear DNICs, the effects of the Fe···Fe distance, nature of the bridging ligands, and type of bridging modes on the regulation of the magnetic coupling among paramagnetic DNIU [Fe(NO)2] are further reviewed. In the last part of this Forum Article, the sequential reaction of {Fe(NO)2}10 DNIC [(NO)2Fe(AMP)] (1-red) with NO(g), HBF4, and KC8 establishes a synthetic cycle, {Fe(NO)2}9-{Fe(NO)2}9 DNIC [(NO)2Fe(μ-dAMP)2Fe(NO)2] (1) → {Fe(NO)2}9 DNIC [(NO2)Fe(AMP)][BF4] (1-H) → {Fe(NO)2}10 DNIC 1-red → DNIC 1, for the transformation of NO into HNO/N2O. Of importance, the NO-induced transformation of {Fe(NO)2}10 DNIC 1-red and [(NO)2Fe(DTA)] (2-red; DTA = diethylenetriamine) unravels a synthetic strategy for preparation of the {Fe(NO)2}9-{Fe(NO)2}9 DNICs [(NO)2Fe(μ-NHR)2Fe(NO)2] containing amido-bridging ligands, which hold the potential to feature distinctive physical properties, chemical reactivities, and biological applications.
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Affiliation(s)
- Chi-Yen Tung
- Department of Chemistry, National Tsing Hua University (NTHU), Hsinchu 30013 Taiwan
| | - Yu-Ting Tseng
- Department of Chemistry, National Tsing Hua University (NTHU), Hsinchu 30013 Taiwan
| | - Tsai-Te Lu
- Institute of Biomedical Engineering, National Tsing Hua University (NTHU), Hsinchu 30013, Taiwan
| | - Wen-Feng Liaw
- Department of Chemistry, National Tsing Hua University (NTHU), Hsinchu 30013 Taiwan
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Sanina N, Kozub G, Kondrat’eva T, Stupina T, Balakina A, Terent’ev A, Sulimenkov I, Ovanesyan N, Dorovatovskii P, Khrustalev V, Aldoshin S. Structure, nitric oxide (NO) generation and antitumor activity of binuclear tetranitrosyl iron complex with 4-aminothiophenolyl as nitrosyl ferredoxins mimic. J COORD CHEM 2021. [DOI: 10.1080/00958972.2020.1869222] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Affiliation(s)
- N.A. Sanina
- Institute of Problems of Chemical Physics, Russian Academy of Sciences, Chernogolovka, Russia
- Faculty of Fundamental Physicochemical Engineering, Moscow State University, Moscow, Russia
- Scientific and Educational Center “Medical Chemistry”, Moscow State Regional University, Mytishchi, Moscow Region, Russia
| | - G.I. Kozub
- Institute of Problems of Chemical Physics, Russian Academy of Sciences, Chernogolovka, Russia
| | - T.A. Kondrat’eva
- Institute of Problems of Chemical Physics, Russian Academy of Sciences, Chernogolovka, Russia
| | - T.S. Stupina
- Institute of Problems of Chemical Physics, Russian Academy of Sciences, Chernogolovka, Russia
- Scientific and Educational Center “Medical Chemistry”, Moscow State Regional University, Mytishchi, Moscow Region, Russia
| | - A.A. Balakina
- Institute of Problems of Chemical Physics, Russian Academy of Sciences, Chernogolovka, Russia
- Scientific and Educational Center “Medical Chemistry”, Moscow State Regional University, Mytishchi, Moscow Region, Russia
| | - A.A. Terent’ev
- Institute of Problems of Chemical Physics, Russian Academy of Sciences, Chernogolovka, Russia
- Faculty of Fundamental Physicochemical Engineering, Moscow State University, Moscow, Russia
- Scientific and Educational Center “Medical Chemistry”, Moscow State Regional University, Mytishchi, Moscow Region, Russia
| | - I.V. Sulimenkov
- Chernogolovka Branch of the N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, Chernogolovkа, Russia
| | - N.S. Ovanesyan
- Institute of Problems of Chemical Physics, Russian Academy of Sciences, Chernogolovka, Russia
| | | | - V.N. Khrustalev
- National Research Center “Kurchatov Institute”, Moscow, Russia
- Peoples’ Friendship University of Russia (RUDN University), Moscow, Russia
| | - S.M. Aldoshin
- Institute of Problems of Chemical Physics, Russian Academy of Sciences, Chernogolovka, Russia
- Faculty of Fundamental Physicochemical Engineering, Moscow State University, Moscow, Russia
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Neshev NI, Sokolova EM, Kozub GI, Kondrat’eva TA, Sanina NA. Kinetic regularities of NO donation by binuclear dinitrosyl iron complexes with thiolate ligands based on thiophenol derivatives in the presence of red blood cells. Russ Chem Bull 2020. [DOI: 10.1007/s11172-020-2989-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Cho SL, Liao CJ, Lu TT. Synthetic methodology for preparation of dinitrosyl iron complexes. J Biol Inorg Chem 2019; 24:495-515. [DOI: 10.1007/s00775-019-01668-z] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2019] [Accepted: 05/15/2019] [Indexed: 12/29/2022]
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Ekanger LA, Oyala PH, Moradian A, Sweredoski MJ, Barton JK. Nitric Oxide Modulates Endonuclease III Redox Activity by a 800 mV Negative Shift upon [Fe 4S 4] Cluster Nitrosylation. J Am Chem Soc 2018; 140:11800-11810. [PMID: 30145881 DOI: 10.1021/jacs.8b07362] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
Here we characterize the [Fe4S4] cluster nitrosylation of a DNA repair enzyme, endonuclease III (EndoIII), using DNA-modified gold electrochemistry and protein film voltammetry, electrophoretic mobility shift assays, mass spectrometry of whole and trypsin-digested protein, and a variety of spectroscopies. Exposure of EndoIII to nitric oxide under anaerobic conditions transforms the [Fe4S4] cluster into a dinitrosyl iron complex, [(Cys)2Fe(NO)2]-, and Roussin's red ester, [(μ-Cys)2Fe2(NO)4], in a 1:1 ratio with an average retention of 3.05 ± 0.01 Fe per nitrosylated cluster. The formation of the dinitrosyl iron complex is consistent with previous reports, but the Roussin's red ester is an unreported product of EndoIII nitrosylation. Hyperfine sublevel correlation (HYSCORE) pulse EPR spectroscopy detects two distinct classes of NO with 14N hyperfine couplings consistent with the dinitrosyl iron complex and reduced Roussin's red ester. Whole-protein mass spectrometry of EndoIII nitrosylated with 14NO and 15NO support the assignment of a protein-bound [(μ-Cys)2Fe2(NO)4] Roussin's red ester. The [Fe4S4]2+/3+ redox couple of DNA-bound EndoIII is observable using DNA-modified gold electrochemistry, but nitrosylated EndoIII does not display observable redox activity using DNA electrochemistry on gold despite having a similar DNA-binding affinity as the native protein. However, direct electrochemistry of protein films on graphite reveals the reduction potential of native and nitrosylated EndoIII to be 127 ± 6 and -674 ± 8 mV vs NHE, respectively, corresponding to a shift of approximately -800 mV with cluster nitrosylation. Collectively, these data demonstrate that DNA-bound redox activity, and by extension DNA-mediated charge transport, is modulated by [Fe4S4] cluster nitrosylation.
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Kozub GI, Sanina NA, Emel'yanova NS, Utenishev AN, Kondrat'eva TA, Khrustalev VN, Ovanesyan NS, Kupchinskaya NE, Aldoshin SM. [Fe2(µ-SR)2(NO)4]0 complexes with R being phenolyl with different substituents in the meta-position: Synthesis, structure, and NO release. Inorganica Chim Acta 2018. [DOI: 10.1016/j.ica.2018.05.015] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Quantum-chemical modeling of possible reactions of Roussin’s red esters with aryl ligands in DMSO solution. Russ Chem Bull 2018. [DOI: 10.1007/s11172-018-2221-5] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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Bis(4-nitrobenzenethiolato)tetranitrosyldiiron: synthesis, structure, and pharmacological activity of a new nitric oxide (NO) donor. Russ Chem Bull 2017. [DOI: 10.1007/s11172-017-1944-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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Sanina NA, Kniazkina EV, Manzhos RA, Emel’yanova NS, Krivenko AG, Aldoshin SM. Redox reactions of binuclear tetranitrosyl iron complexes with bridging N-C-S ligands. Inorganica Chim Acta 2016. [DOI: 10.1016/j.ica.2016.05.006] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Synthesis, structure, biochemical, and docking studies of a new dinitrosyl iron complex [Fe2(μ-SC4H3SCH2)2(NO)4]. J Mol Struct 2015. [DOI: 10.1016/j.molstruc.2015.03.025] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Davidovich P, Gurzhiy V, Sanina N, Shchukarev A, Garabadzhiu A, Belyaev A. Synthesis and structure of dinitrosyl iron complexes with secondary thiolate bridging ligands [Fe2(μ-SCHR2)2(NO)4], R = Me, Ph. Polyhedron 2015. [DOI: 10.1016/j.poly.2015.02.009] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
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Sanina N, Kozub G, Kondratéva T, Korchagin D, Shilov G, Emelýanova N, Manzhos R, Krivenko A, Aldoshin S. Synthesis, structure, NO-donor and redox activity of bis-(2-methylfuranethiolate)tetranitrosyl diiron. J Mol Struct 2014. [DOI: 10.1016/j.molstruc.2014.06.024] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
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Theoretical Predictions of Redox Potentials of Fischer-Type Chromium Aminocarbene Complexes. Organometallics 2014. [DOI: 10.1021/om500259u] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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Emel’yanova NS, Sanina NA, Knyaz’kina EV, Krivenko AG, Manzhos RA, Aldoshin SM. Quantum chemical modeling of the effect of the nature of a μ-SCN-type ligand on the redox properties of iron nitrosyl complexes. Russ Chem Bull 2014. [DOI: 10.1007/s11172-014-0589-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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