1
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Nisal R, Jayakannan M. Tertiary-Butylbenzene Functionalization as a Strategy for β-Sheet Polypeptides. Biomacromolecules 2022; 23:2667-2684. [DOI: 10.1021/acs.biomac.2c00416] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Rahul Nisal
- Department of Chemistry, Indian Institute of Science Education and Research (IISER Pune), Dr. Homi Bhabha Road, Pune 411008, Maharashtra, India
| | - Manickam Jayakannan
- Department of Chemistry, Indian Institute of Science Education and Research (IISER Pune), Dr. Homi Bhabha Road, Pune 411008, Maharashtra, India
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2
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Anas M, Dinda P, Kar M, Mandal TK. Anion-induced thermoresponsiveness in cationic polycysteine and DNA binding. Polym Chem 2021. [DOI: 10.1039/d1py01187a] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
This study describes the synthesis of an l-cysteine-based water-soluble cationic polypeptide, an investigation of its thermoresponsive behaviour in the presence of added anions and its polyplexation with DNA.
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Affiliation(s)
- Mahammad Anas
- School of Chemical Sciences, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700032, India
| | - Priyanka Dinda
- School of Chemical Sciences, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700032, India
| | - Mahuya Kar
- School of Chemical Sciences, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700032, India
| | - Tarun K. Mandal
- School of Chemical Sciences, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700032, India
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3
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Kafarski P. Phosphonopeptides containing free phosphonic groups: recent advances. RSC Adv 2020; 10:25898-25910. [PMID: 35518575 PMCID: PMC9055344 DOI: 10.1039/d0ra04655h] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2020] [Accepted: 07/02/2020] [Indexed: 11/21/2022] Open
Abstract
Phosphonopeptides are mimetics of peptides in which phosphonic acid or related (phosphinic, phosphonous etc.) group replaces either carboxylic acid group present at C-terminus, is located in the peptidyl side chain, or phosphonamidate or phosphinic acid mimics peptide bond. Acting as inhibitors of key enzymes related to variable pathological states they display interesting and useful physiologic activities with potential applications in medicine and agriculture. Since the synthesis and biological properties of peptides containing C-terminal diaryl phosphonates and those with phosphonic fragment replacing peptide bond were comprehensively reviewed, this review concentrate on peptides holding free, unsubstituted phosphonic acid moiety. There are two groups of such mimetics: (i) peptides in which aminophosphonic acid is located at C-terminus of the peptide chain with most of them (including antibiotics isolated from bacteria and fungi) exhibiting antimicrobial activity; (ii) non-hydrolysable analogues of phosphonoamino acids, which are useful tools to study physiologic effects of phosphorylations.
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Affiliation(s)
- Paweł Kafarski
- Department of Bioorganic Chemistry, Wrocław University of Science and Technology Wybrzeże Wyspiańskiego 27 50-305 Wrocław Poland
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4
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Mondal B, Das S, Panda S, Dutta T, Gupta SS. Synthesis of Phospho‐Polypeptides via Phosphate‐Containing N‐Carboxyanhydride: Application in Enzyme‐Induced Self‐Assembly, and Calcium Carbonate Mineralization. Chempluschem 2020; 85:1053-1064. [PMID: 32449828 DOI: 10.1002/cplu.202000322] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2020] [Revised: 05/04/2020] [Indexed: 12/25/2022]
Affiliation(s)
- Basudeb Mondal
- Department of Chemical SciencesIndian Institute of Science Education and Research, Kolkata Mohanpur Campus Nadia, West Bengal 741246 India
| | - Soumen Das
- Chemical Engineering and Process DevelopmentCSIR-National Chemical Laboratory Pune, Maharashtra 411008 India
| | - Sidharth Panda
- Department of Chemical SciencesIndian Institute of Science Education and Research, Kolkata Mohanpur Campus Nadia, West Bengal 741246 India
| | - Tahiti Dutta
- Department of Chemical SciencesIndian Institute of Science Education and Research, Kolkata Mohanpur Campus Nadia, West Bengal 741246 India
| | - Sayam Sen Gupta
- Department of Chemical SciencesIndian Institute of Science Education and Research, Kolkata Mohanpur Campus Nadia, West Bengal 741246 India
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5
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Toncheva-Moncheva N, Dangalov M, Vassilev NG, Novakov CP. Thiol–ene coupling reaction achievement and monitoring by “ in situ” UV irradiation NMR spectroscopy. RSC Adv 2020; 10:25214-25222. [PMID: 35517473 PMCID: PMC9055274 DOI: 10.1039/d0ra03902k] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2020] [Accepted: 06/18/2020] [Indexed: 11/21/2022] Open
Abstract
In this study, the possibilities of a new “in situ” LED UV illumination NMR spectroscopic technique for performing an initiator-free thiol–ene “click” coupling reaction of an allyl-functionalized poly(allyl glycidyl ether) (PAGE) prepolymer with a number of mono- and di-oligo polyethylene glycol (PEG) thiols is demonstrated. The state-of-the-art setup constructed with LEDs as UV light sources that illuminate through optical fibers directly into an NMR testing tube at a fixed wavelength of 365 nm is appropriate for various polymeric materials and biologically active substances. The selected experimental protocol uses a series of periods of irradiation and dark periods, thus providing opportunities to conduct an effective thiol–ene “click” reaction and simultaneously study the kinetics of the photochemical reaction with the exposure time, as well as macromolecular association directly in a solution applying the whole types of NMR methods: from conventional 1H or 13C NMR to diffusion NMR spectroscopy (DOSY). In addition, the molecular mass characteristics of the prepared copolymers were studied by gel-permeation chromatography (GPC). The observed differences in the reaction rates as well as in the size of species formed (the corresponding hydrodynamic radiuses Rh of aggregates) as a result of the coupling process of parent PAGE prepolymers and model PEG thiols were thoroughly discussed and the reaction pathway proposed. An “In situ” LED UV illumination NMR setup for achievement of initiator-free coupling reactions of allyl-functionalized poly(allyl glycidyl ether) with polyethylene glycols thiols.![]()
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Affiliation(s)
| | - Miroslav Dangalov
- Institute of Organic Chemistry with Center of Phytochemistry
- Bulgarian Academy of Sciences
- 1113 Sofia
- Bulgaria
| | - Nikolay G. Vassilev
- Institute of Organic Chemistry with Center of Phytochemistry
- Bulgarian Academy of Sciences
- 1113 Sofia
- Bulgaria
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6
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Tsai YL, Tseng YC, Chen YM, Wen TC, Jan JS. Zwitterionic polypeptides bearing carboxybetaine and sulfobetaine: synthesis, self-assembly, and their interactions with proteins. Polym Chem 2018. [DOI: 10.1039/c7py01167a] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
Zwitterionic polypeptides bearing carboxybetaine and sulfobetaine were synthesized and their self-assembly and protein interactions were evaluated.
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Affiliation(s)
- Yu-Lin Tsai
- Department of Chemical Engineering
- National Cheng Kung University
- Tainan City 70101
- Taiwan
| | - Yu-Chao Tseng
- Department of Chemical Engineering
- National Cheng Kung University
- Tainan City 70101
- Taiwan
| | - Yan-Miao Chen
- Department of Medicinal and Applied Chemistry
- Kaohsiung Medical University
- Kaohsiung City 80708
- Taiwan
| | - Tain-Ching Wen
- Department of Chemical Engineering
- National Cheng Kung University
- Tainan City 70101
- Taiwan
| | - Jeng-Shiung Jan
- Department of Chemical Engineering
- National Cheng Kung University
- Tainan City 70101
- Taiwan
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7
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Song Z, Han Z, Lv S, Chen C, Chen L, Yin L, Cheng J. Synthetic polypeptides: from polymer design to supramolecular assembly and biomedical application. Chem Soc Rev 2017; 46:6570-6599. [DOI: 10.1039/c7cs00460e] [Citation(s) in RCA: 215] [Impact Index Per Article: 30.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
This review highlights the recent advances in the chemical design, supramolecular assembly, and biomedical application of synthetic polypeptides fromN-carboxyanhydrides.
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Affiliation(s)
- Ziyuan Song
- Department of Materials Science and Engineering
- University of Illinois at Urbana-Champaign
- Urbana
- USA
| | - Zhiyuan Han
- Department of Materials Science and Engineering
- University of Illinois at Urbana-Champaign
- Urbana
- USA
| | - Shixian Lv
- Department of Materials Science and Engineering
- University of Illinois at Urbana-Champaign
- Urbana
- USA
- Jiangsu Key Laboratory for Carbon-Based Functional Materials & Devices
| | - Chongyi Chen
- Department of Materials Science and Engineering
- University of Illinois at Urbana-Champaign
- Urbana
- USA
- School of Materials Science and Chemical Engineering
| | - Li Chen
- Department of Materials Science and Engineering
- University of Illinois at Urbana-Champaign
- Urbana
- USA
- Department of Chemistry
| | - Lichen Yin
- Jiangsu Key Laboratory for Carbon-Based Functional Materials & Devices
- Institute of Functional Nano & Soft Materials (FUNSOM)
- Soochow University
- Suzhou 215123
- P. R. China
| | - Jianjun Cheng
- Department of Materials Science and Engineering
- University of Illinois at Urbana-Champaign
- Urbana
- USA
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8
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Das S, Parekh N, Mondal B, Gupta SS. Controlled Synthesis of End-Functionalized Mannose-6-phosphate Glycopolypeptides for Lysosome Targeting. ACS Macro Lett 2016; 5:809-813. [PMID: 35614754 DOI: 10.1021/acsmacrolett.6b00297] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
The ubiquitous expression of the mannose-6-phosphate receptor on the majority of human cells makes it a valid target in the quest to deliver therapeutics selectively to the lysosome. In this work end-functionalized polyvalent mannose-6-phosphate glycopolypeptides (M6P-GPs) with high molecular weights (up to 22 kDa) have been synthesized via NCA polymerization. These synthetic M6P-GPs were found to display minimal toxicity to cells in vitro and show exceptional selectivity for trafficking into lysosomes in various cell lines. Comparison of the cellular uptake behavior of M6P-GP and the corresponding mannose-GP polymer reveals that incorporation of the phosphate moiety at the 6-position of mannose completely alters its trafficking behavior and becomes exclusively lysosome specific. We also demonstrate that trafficking of M6P-GPs in mammalian cells is likely associated with the CI-MPR receptor pathway.
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Affiliation(s)
- Soumen Das
- CReST Chemical Engineering
Division, CSIR National Chemical Laboratory, Dr. Homi Bhabha Road, Pune 411008, India
| | - Nimisha Parekh
- CReST Chemical Engineering
Division, CSIR National Chemical Laboratory, Dr. Homi Bhabha Road, Pune 411008, India
| | - Basudeb Mondal
- CReST Chemical Engineering
Division, CSIR National Chemical Laboratory, Dr. Homi Bhabha Road, Pune 411008, India
| | - Sayam Sen Gupta
- CReST Chemical Engineering
Division, CSIR National Chemical Laboratory, Dr. Homi Bhabha Road, Pune 411008, India
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9
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Sun Y, Hou Y, Zhou X, Yuan J, Wang J, Lu H. Controlled Synthesis and Enzyme-Induced Hydrogelation of Poly(l-phosphotyrosine)s via Ring-Opening Polymerization of α-Amino Acid N-Carboxyanhydride. ACS Macro Lett 2015; 4:1000-1003. [PMID: 35596435 DOI: 10.1021/acsmacrolett.5b00429] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
Tyrosine phosphorylation is an important post-translational modification (PTM) that governs numerous cellular processes. Constructing synthetic phosphotyrosine polypeptides helps expand the horizon of our understanding regarding the fundamental aspects and biological consequences of this PTM. Here, we report the synthesis of a novel monomer, O-diethylphospho l-tyrosine N-carboxyanhydride (pOEt TyrNCA), whose ring-opening polymerization (ROP) mediated by hexamethyldisilazane (HMDS) leads to poly(l-phosphotyrosine) (P(pTyr)) derivatives with controllable molecular weights and narrow molecular-weight distributions. Moreover, P(pTyr)15-b-PEG-b-P(pTyr)15 triblock copolymer (TBP15) undergo sol-gel transition in the presence of alkaline phosphatase. The stiffness of the gel is reinforced by the addition of horseradish peroxidase and hydrogen peroxide. These phosphotyrosine-mimicking polymers are realized for the first time by NCA polymerization and are promising materials for a variety of biological applications.
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Affiliation(s)
- Yunlong Sun
- Beijing National Laboratory
for Molecular Sciences, Center for Soft Matter Science and Engineering,
Key Laboratory of Polymer Chemistry and Physics of Ministry of Education,
College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, People’s Republic of China
| | - Yingqin Hou
- Beijing National Laboratory
for Molecular Sciences, Center for Soft Matter Science and Engineering,
Key Laboratory of Polymer Chemistry and Physics of Ministry of Education,
College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, People’s Republic of China
| | - Xuhao Zhou
- Beijing National Laboratory
for Molecular Sciences, Center for Soft Matter Science and Engineering,
Key Laboratory of Polymer Chemistry and Physics of Ministry of Education,
College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, People’s Republic of China
| | - Jingsong Yuan
- Beijing National Laboratory
for Molecular Sciences, Center for Soft Matter Science and Engineering,
Key Laboratory of Polymer Chemistry and Physics of Ministry of Education,
College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, People’s Republic of China
| | - Jingyu Wang
- Beijing National Laboratory
for Molecular Sciences, Center for Soft Matter Science and Engineering,
Key Laboratory of Polymer Chemistry and Physics of Ministry of Education,
College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, People’s Republic of China
| | - Hua Lu
- Beijing National Laboratory
for Molecular Sciences, Center for Soft Matter Science and Engineering,
Key Laboratory of Polymer Chemistry and Physics of Ministry of Education,
College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, People’s Republic of China
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10
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Affiliation(s)
- Timothy J. Deming
- Department of Bioengineering, University of California, 5121 Engineering 5, Los
Angeles, California 90095, United States
- Department of Chemistry and
Biochemistry, University of California, 607 Charles E. Young Drive East, Los Angeles, California 90095, United States
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11
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Yakovlev I, Deming TJ. Controlled synthesis of phosphorylcholine derivatives of poly(serine) and poly(homoserine). J Am Chem Soc 2015; 137:4078-81. [PMID: 25790104 DOI: 10.1021/jacs.5b01543] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
We report methods for the synthesis of polypeptides that are fully functionalized with desirable phosphorylcholine, PC, groups. Because of the inherent challenges in the direct incorporation of the PC group into α-amino acid N-carboxyanhydride (NCA) monomers, we developed a synthetic approach that combined functional NCA polymerization with efficient postpolymerization modification. While poly(L-phosphorylcholine serine) was found to be unstable upon synthesis, we successfully prepared poly(L-phosphorylcholine homoserine) with controlled chain lengths and found these to be water-soluble with disordered chain conformations.
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Affiliation(s)
- Ilya Yakovlev
- †Department of Chemistry and Biochemistry and ‡Department of Bioengineering, University of California, Los Angeles, California 90095, United States
| | - Timothy J Deming
- †Department of Chemistry and Biochemistry and ‡Department of Bioengineering, University of California, Los Angeles, California 90095, United States
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12
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13
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Ma Y, Fu X, Shen Y, Fu W, Li Z. Irreversible Low Critical Solution Temperature Behaviors of Thermal-responsive OEGylated Poly(l-cysteine) Containing Disulfide Bonds. Macromolecules 2014. [DOI: 10.1021/ma501104s] [Citation(s) in RCA: 45] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Yinan Ma
- Beijing National Laboratory
for Molecular Sciences (BNLMS), Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
| | - Xiaohui Fu
- Beijing National Laboratory
for Molecular Sciences (BNLMS), Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
| | - Yong Shen
- Beijing National Laboratory
for Molecular Sciences (BNLMS), Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
| | - Wenxin Fu
- Beijing National Laboratory
for Molecular Sciences (BNLMS), Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
| | - Zhibo Li
- Beijing National Laboratory
for Molecular Sciences (BNLMS), Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
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14
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Yakovlev I, Deming TJ. Analogues of Poly(l-phosphoserine) via Living Polymerization of Phosphonate-Containing N-Carboxyanhydride Monomers. ACS Macro Lett 2014; 3:378-381. [PMID: 35590750 DOI: 10.1021/mz500119w] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
We have synthesized new phosphonate-containing α-amino acid N-carboxyanhydride (NCA) monomers and used these to prepare well-defined phosphonate-containing polypeptides and block copolypeptides. These NCAs were found to undergo living polymerization to high molecular weights with narrow chain length distributions. The methods described here demonstrate that phosphono polypeptides are also readily incorporated into block copolymers with controlled architecture and composition. One polymer, poly(l-phosphonohomoalanine) (poly(Pha)), is an isosteric analogue of poly(l-phosphoserine) and was found to display a pH-responsive conformational change. The pH-responsive α-helical conformation of poly(Pha) is unprecedented and may prove to be useful in the preparation of stimuli-responsive block copolypeptides containing poly(Pha) segments.
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Affiliation(s)
- Ilya Yakovlev
- Department of Chemistry and Biochemistry and ‡Department of
Bioengineering, University of California, Los Angeles, California 90095, United States
| | - Timothy J. Deming
- Department of Chemistry and Biochemistry and ‡Department of
Bioengineering, University of California, Los Angeles, California 90095, United States
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15
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Lowe AB. Thiol–ene “click” reactions and recent applications in polymer and materials synthesis: a first update. Polym Chem 2014. [DOI: 10.1039/c4py00339j] [Citation(s) in RCA: 579] [Impact Index Per Article: 57.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
This contribution serves as an update to a previous review (Polym. Chem.2010,1, 17–36) and highlights recent applications of thiol–ene ‘click’ chemistry as an efficient tool for both polymer/materials synthesis as well as modification.
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Affiliation(s)
- Andrew B. Lowe
- School of Chemical Engineering
- Centre for Advanced Macromolecular Design
- UNSW Australia
- University of New South Wales
- Kensington Sydney, Australia
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