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Lee W, Mulay SV, Shimodaira S, Abdillah A, Palma J, Kim Y, Yudhistira T, Churchill DG. Didactic approach recounting advances and limitations in novel glutathione and cysteine detection (reduced GSH probe) with mixed coumarin, aldehyde, and phenyl-selenium chemistry. Methods Enzymol 2020; 640:267-289. [PMID: 32560802 DOI: 10.1016/bs.mie.2020.04.072] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
We describe the pertinent research steps and analysis, many of which are chemical, to achieve a novel molecular probe for glutathione (GSH) which has been published and patented based on two recent articles: "Exceptional time response, stability and selectivity in doubly-activated phenyl selenium-based glutathione-selective platform" and "Enhanced Doubly Activated Dual Emission Fluorescent Probes for Selective Imaging of Glutathione or Cysteine in Living Systems" (Kim et al., 2015; Mulay et al., 2018). The papers involve coumarin probes. Reaction/detection unfolds with aminothiol attack at an electrophilic ring carbon position. An adjacent -CHO group is heavily involved in resonance aspects of the C-Se position, as well as the binding of the pendant N-group; the coumarin lactone carbonyl also allows for resonance to be achieved (vide infra). The leaving group, -SePh, while precedented in some systems, depends on electronic tuning (Fig. 1). For 1, the response times with GSH was ~100ms; a 100-fold fluorescence increase is observed (Compound 1). The probe also reacts with cysteine (Cys) and homocysteine (Hcy), albeit differently. For glutathione probing, the greater wavelength maxima (1: 550nm, DACP-1: 555nm, DACP-2: 590nm) enabled eventual cell studies (confocal microscopy) and animal studies. The limits of detection (LOD, 1: 270nM DACP-1: 10.1nM DACP-2: 17.0nM), as measured using the 3σ/k method. We provide a didactic presentation from probe conception to probe in vivo testing, etc., with additional considerations presented; a variety of factors/issues (2.1-2.28) help maintain a realistic sequence, a flow from wider to narrower, of the factors that go into developing medical, biological and neurodegenerative disease-related probes, meant to help other researchers follow our intention, gain perspective, and overcome current limitations.
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Affiliation(s)
- Woohyun Lee
- Molecular Logic Gate Laboratory, Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Republic of Korea
| | - Sandip V Mulay
- Molecular Logic Gate Laboratory, Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Republic of Korea
| | - Shingo Shimodaira
- Molecular Logic Gate Laboratory, Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Republic of Korea; Center for Catalytic Hydrocarbon Functionalizations, Institute for Basic Science (IBS), Daejeon, Republic of Korea
| | - Ariq Abdillah
- Molecular Logic Gate Laboratory, Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Republic of Korea
| | - Jaymee Palma
- Molecular Logic Gate Laboratory, Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Republic of Korea
| | - Youngsam Kim
- Molecular Logic Gate Laboratory, Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Republic of Korea; Korea Institute of Science and Technology (KIST), Saarbrücken, Germany
| | - Tesla Yudhistira
- Molecular Logic Gate Laboratory, Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Republic of Korea; Laboratory of Bioimaging and Pathology (UMR-7021), Faculty of Pharmacy, University of Strasbourg, Strasbourg, France
| | - David G Churchill
- Molecular Logic Gate Laboratory, Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Republic of Korea; Center for Catalytic Hydrocarbon Functionalizations, Institute for Basic Science (IBS), Daejeon, Republic of Korea; KAIST Institute for Health Science and Technology (KIHST) (Therapeutic Bioengineering), Daejeon, Republic of Korea.
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Chen YH, Lv XJ, You ZH, Liu YK. Asymmetric Organocatalyzed Reaction Sequence To Synthesize Chiral Bridged and Spiro-Bridged Benzofused Aminals via Divergent Pathways. Org Lett 2019; 21:5556-5561. [PMID: 31244090 DOI: 10.1021/acs.orglett.9b01874] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
A highly efficient asymmetric organocatalysis-triggered reaction sequence is developed. 2-Hydroxy cinnamaldehydes and cyclic N-sulfonyl ketimines were both used as multisite substrates (more than two reactive sites) to access structurally diverse chiral bridged and spiro-bridged benzofused aminal derivatives, where an inseparable equilibrating mixture of isomers can be regioselectively converted into bridged benzofused aminals with different ring connectivities via divergent pathways. Several stereoselective transformations of the resulted bridged aminals are presented.
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Affiliation(s)
- Ying-Han Chen
- Key Laboratory of Marine Drugs, Chinese Ministry of Education, School of Medicine and Pharmacy , Ocean University of China , Qingdao 266003 , China
| | - Xue-Jiao Lv
- Key Laboratory of Marine Drugs, Chinese Ministry of Education, School of Medicine and Pharmacy , Ocean University of China , Qingdao 266003 , China
| | - Zhi-Hao You
- Key Laboratory of Marine Drugs, Chinese Ministry of Education, School of Medicine and Pharmacy , Ocean University of China , Qingdao 266003 , China
| | - Yan-Kai Liu
- Key Laboratory of Marine Drugs, Chinese Ministry of Education, School of Medicine and Pharmacy , Ocean University of China , Qingdao 266003 , China.,Laboratory for Marine Drugs and Bioproducts of Qingdao National Laboratory for Marine Science and Technology , Qingdao 266003 , China
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Synthesis and Chemical Properties of 3-Phosphono-coumarins and 1,2-Benzoxaphosphorins as Precursors for Bioactive Compounds. Molecules 2019; 24:molecules24112030. [PMID: 31141889 PMCID: PMC6600311 DOI: 10.3390/molecules24112030] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2019] [Revised: 05/23/2019] [Accepted: 05/27/2019] [Indexed: 01/16/2023] Open
Abstract
Coumarins are an important class of natural heterocyclic compounds that have attracted considerable synthetic and pharmacological interest due to their various biological activities. This review emphasizes on the synthetic methods for the preparation of dialkyl 2-oxo-2H-1-benzo- pyran-3-phosphonates and alkyl 1,2-benzoxaphosphorin-3-carboxylates. Their chemical properties as acceptors in conjugate addition reactions, [2+2] and [3+2] cycloaddition reactions are discussed.
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Chen YH, Lv XJ, You ZH, Liu YK. Asymmetric organocatalyzed reaction sequence of 2-hydroxy cinnamaldehydes and acyclic N-sulfonyl ketimines to construct diverse chiral bridged polycyclic aminals. Org Chem Front 2019. [DOI: 10.1039/c9qo01116a] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
2-Hydroxy cinnamaldehydes and acyclic N-sulfonyl ketimines were used as multisite substrates in an iminium catalysis triggered sequential process, leading to diverse chiral bridged polycyclic aminals in a highly regio- and stereoselective manner.
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Affiliation(s)
- Ying-Han Chen
- Key Laboratory of Marine Drugs
- Chinese Ministry of Education
- School of Medicine and Pharmacy
- Ocean University of China
- Qingdao 266003
| | - Xue-Jiao Lv
- Key Laboratory of Marine Drugs
- Chinese Ministry of Education
- School of Medicine and Pharmacy
- Ocean University of China
- Qingdao 266003
| | - Zhi-Hao You
- Key Laboratory of Marine Drugs
- Chinese Ministry of Education
- School of Medicine and Pharmacy
- Ocean University of China
- Qingdao 266003
| | - Yan-Kai Liu
- Key Laboratory of Marine Drugs
- Chinese Ministry of Education
- School of Medicine and Pharmacy
- Ocean University of China
- Qingdao 266003
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Pramthaisong C, Worayuthakarn R, Pharikronburee V, Duangthongyou T, Rattanakam R, Ruchirawat S, Thasana N. Base-Mediated Cascade Cyclization: Stereoselective Synthesis of Benzooxazocinone. Org Lett 2018; 20:4015-4019. [DOI: 10.1021/acs.orglett.8b01573] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Chiranan Pramthaisong
- Chemical Biology Program, Chulabhorn Graduate Institute, Laksi, Bangkok 10210, Thailand
| | - Rattana Worayuthakarn
- Laboratory of Medicinal Chemistry, Chulabhorn Research Institute, Laksi, Bangkok 10210, Thailand
| | - Vannapha Pharikronburee
- Laboratory of Medicinal Chemistry, Chulabhorn Research Institute, Laksi, Bangkok 10210, Thailand
| | - Tanwawan Duangthongyou
- Department of Chemistry, Faculty of Science, Kasetsart University, Bangkok 10903, Thailand
| | - Ramida Rattanakam
- Department of Chemistry, Faculty of Science, Kasetsart University, Bangkok 10903, Thailand
| | - Somsak Ruchirawat
- Chemical Biology Program, Chulabhorn Graduate Institute, Laksi, Bangkok 10210, Thailand
- Laboratory of Medicinal Chemistry, Chulabhorn Research Institute, Laksi, Bangkok 10210, Thailand
- Center of Excellence on Environmental Health and Toxicology, Ministry of Education, Bangkok, Thailand
| | - Nopporn Thasana
- Chemical Biology Program, Chulabhorn Graduate Institute, Laksi, Bangkok 10210, Thailand
- Laboratory of Medicinal Chemistry, Chulabhorn Research Institute, Laksi, Bangkok 10210, Thailand
- Center of Excellence on Environmental Health and Toxicology, Ministry of Education, Bangkok, Thailand
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Deredas D, Huben K, Janecka A, Długosz A, Pomorska DK, Mirowski M, Krajewska U, Janecki T, Krawczyk H. Synthesis and anticancer properties of 3-methylene-4-(2-oxoalkyl)-3,4-dihydrocoumarins. MEDCHEMCOMM 2016. [DOI: 10.1039/c6md00118a] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A simple and general strategy for the synthesis of 3-methylene-4-(2-oxoalkyl)-3,4-dihydrocoumarins has been developed.
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Affiliation(s)
- D. Deredas
- Institute of Organic Chemistry
- Lodz University of Technology
- 90-924 Łódź
- Poland
| | - K. Huben
- Institute of Organic Chemistry
- Lodz University of Technology
- 90-924 Łódź
- Poland
| | - A. Janecka
- Department of Pharmaceutical Biochemistry
- Medical University of Łódź
- 90-151 Łódź
- Poland
| | - A. Długosz
- Department of Pharmaceutical Biochemistry
- Medical University of Łódź
- 90-151 Łódź
- Poland
| | - D. K. Pomorska
- Department of Pharmaceutical Biochemistry
- Medical University of Łódź
- 90-151 Łódź
- Poland
| | - M. Mirowski
- Department of Biomolecular Chemistry
- Medical University of Łódź
- 92-215 Łódź
- Poland
| | - U. Krajewska
- Department of Biomolecular Chemistry
- Medical University of Łódź
- 92-215 Łódź
- Poland
| | - T. Janecki
- Institute of Organic Chemistry
- Lodz University of Technology
- 90-924 Łódź
- Poland
| | - H. Krawczyk
- Institute of Organic Chemistry
- Lodz University of Technology
- 90-924 Łódź
- Poland
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Rao Y, Liu M, Wu L, Yin G. Catalyst-free one-pot domino reactions for selective synthesis of functionalized 2,8-oxazabicyclo[3.3.1]-nonanes and 5H-indeno[1,2-b]pyridin-5-ones. RSC Adv 2014. [DOI: 10.1039/c4ra13166e] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
A simple and efficient method for one-pot selective synthesis of functionalized 2,8-oxazaxabicyclo[3.3.1]nonanes and hydroxy-containing 5H-indeno[1,2-b]pyridin-5-ones under catalyst-free conditions has been developed.
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Affiliation(s)
- Yin Rao
- Hubei Collaborative Innovation Center for Rare Metal Chemistry
- Hubei Key Laboratory of Pollutant Analysis and Reuse Technology
- Hubei Normal University
- Huangshi 435002, China
| | - Meilin Liu
- Hubei Collaborative Innovation Center for Rare Metal Chemistry
- Hubei Key Laboratory of Pollutant Analysis and Reuse Technology
- Hubei Normal University
- Huangshi 435002, China
| | - Lu Wu
- Hubei Collaborative Innovation Center for Rare Metal Chemistry
- Hubei Key Laboratory of Pollutant Analysis and Reuse Technology
- Hubei Normal University
- Huangshi 435002, China
| | - Guodong Yin
- Hubei Collaborative Innovation Center for Rare Metal Chemistry
- Hubei Key Laboratory of Pollutant Analysis and Reuse Technology
- Hubei Normal University
- Huangshi 435002, China
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