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Kaur H, Roy S. Enzyme-Induced Supramolecular Order in Pyrene Dipeptide Hydrogels for the Development of an Efficient Energy-Transfer Template. Biomacromolecules 2021; 22:2393-2407. [PMID: 33973785 DOI: 10.1021/acs.biomac.1c00187] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Peptide self-assembly is gathering much attention due to the precise control it provides for the arrangement of functional moieties for the fabrication of advanced functional materials. It is desirable to use a physical, chemical, or biological trigger that can control the self-assembly process. In the current article, we have applied an enzyme to induce the peptide self-assembly of an aromatic peptide amphiphile, which modulates the supramolecular order in the final gel phase material. We accessed diverse peptide hydrogels from identical gelator concentrations by simply changing the enzyme concentration, which controlled the reaction kinetics and influenced the dynamics of self-assembly. Depending upon the concentration of the enzyme, a bell-shaped relationship was observed in terms of intermolecular interactions, morphology, and properties of the final gel phase material. The access of non-equilibrium structures was further demonstrated by fluorescence emission spectroscopy, circular dichroism spectroscopy, atomic force microscopy, transmission electron microscopy, and rheology. This strategy is applied to construct a charge-transfer hydrogel by doping the donor hydrogel with an acceptor moiety, which exhibits efficient energy transfer. Interestingly, such structural control at the nanoscopic level can further tune the energy-transfer efficiency by simply modulating the enzyme concentration.
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Affiliation(s)
- Harsimran Kaur
- Institute of Nano Science and Technology, Phase-10, Sector-64, Mohali, Punjab 160062, India
| | - Sangita Roy
- Institute of Nano Science and Technology, Phase-10, Sector-64, Mohali, Punjab 160062, India
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2
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Das AK, Gavel PK. Low molecular weight self-assembling peptide-based materials for cell culture, antimicrobial, anti-inflammatory, wound healing, anticancer, drug delivery, bioimaging and 3D bioprinting applications. SOFT MATTER 2020; 16:10065-10095. [PMID: 33073836 DOI: 10.1039/d0sm01136c] [Citation(s) in RCA: 45] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
In this review, we have focused on the design and development of low molecular weight self-assembling peptide-based materials for various applications including cell proliferation, tissue engineering, antibacterial, antifungal, anti-inflammatory, anticancer, wound healing, drug delivery, bioimaging and 3D bioprinting. The first part of the review describes about stimuli and various noncovalent interactions, which are the key components of various self-assembly processes for the construction of organized structures. Subsequently, the chemical functionalization of the peptides has been discussed, which is required for the designing of self-assembling peptide-based soft materials. Various low molecular weight self-assembling peptides have been discussed to explain the important structural features for the construction of defined functional nanostructures. Finally, we have discussed various examples of low molecular weight self-assembling peptide-based materials for cell culture, antimicrobial, anti-inflammatory, anticancer, wound healing, drug delivery, bioimaging and 3D bioprinting applications.
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Affiliation(s)
- Apurba K Das
- Department of Chemistry, Indian Institute of Technology Indore, Indore 453552, India.
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3
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Xie X, Wang L, Liu X, Du Z, Li Y, Li B, Wu L, Li W. Light-powered and transient peptide two-dimensional assembly driven by trans-to-cis isomerization of azobenzene side chains. Chem Commun (Camb) 2020; 56:1867-1870. [DOI: 10.1039/c9cc09448b] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
A 2D dissipative system is initiated by photo-powered trans-to-cis isomerization of azobenzene, which usually results in the collapse of ordered assemblies.
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Affiliation(s)
- Xiaoming Xie
- State Key Laboratory of Supramolecular Structure and Materials
- Institute of Theoretical Chemistry
- College of Chemistry
- Jilin University
- Changchun 130012
| | - Liang Wang
- State Key Laboratory of Supramolecular Structure and Materials
- Institute of Theoretical Chemistry
- College of Chemistry
- Jilin University
- Changchun 130012
| | - Xiaohuan Liu
- State Key Laboratory of Supramolecular Structure and Materials
- Institute of Theoretical Chemistry
- College of Chemistry
- Jilin University
- Changchun 130012
| | - Zhanglei Du
- State Key Laboratory of Supramolecular Structure and Materials
- Institute of Theoretical Chemistry
- College of Chemistry
- Jilin University
- Changchun 130012
| | - Yiwen Li
- State Key Laboratory of Supramolecular Structure and Materials
- Institute of Theoretical Chemistry
- College of Chemistry
- Jilin University
- Changchun 130012
| | - Bao Li
- State Key Laboratory of Supramolecular Structure and Materials
- Institute of Theoretical Chemistry
- College of Chemistry
- Jilin University
- Changchun 130012
| | - Lixin Wu
- State Key Laboratory of Supramolecular Structure and Materials
- Institute of Theoretical Chemistry
- College of Chemistry
- Jilin University
- Changchun 130012
| | - Wen Li
- State Key Laboratory of Supramolecular Structure and Materials
- Institute of Theoretical Chemistry
- College of Chemistry
- Jilin University
- Changchun 130012
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4
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Yang L, Wang F, Auphedeous DIY, Feng C. Achiral isomers controlled circularly polarized luminescence in supramolecular hydrogels. NANOSCALE 2019; 11:14210-14215. [PMID: 31317160 DOI: 10.1039/c9nr05033g] [Citation(s) in RCA: 42] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Although chiral functional materials showing circularly polarized luminescence (CPL) are being widely reported, it remains a challenge to provide convenient and universal strategies for constructing controllable CPL-active materials with a high luminescence dissymmetry factor (glum). Herein, the supramolecular chirality as well as the CPL handedness of phenylalanine-based hydrogels can be effectively regulated by commercial achiral naphthylamine isomers through non-covalent interactions. Typically, the co-assembled hydrogels exhibit considerably high |glum| values in the range of 5.62 × 10-3-8.74 × 10-3. The CPL inversion is mainly facilitated by intermolecular hydrogen bonds and π-π stacking between the achiral and chiral molecules, which might be induced by the reorientations of the assembled molecules. This work may provide an alternative method to construct tunable CPL-active materials.
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Affiliation(s)
- Li Yang
- State Key Lab of Metal Matrix Composites, School of Materials Science and Engineering, Shanghai Jiao Tong University, Dongchuan Road 800, 200240, Shanghai, China.
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Mansbach RA, Ferguson AL. Patchy Particle Model of the Hierarchical Self-Assembly of π-Conjugated Optoelectronic Peptides. J Phys Chem B 2018; 122:10219-10236. [DOI: 10.1021/acs.jpcb.8b05781] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Rachael A. Mansbach
- Department of Physics, University of Illinois at Urbana−Champaign, 1110 West Green Street, Urbana, Illinois 61801, United States
| | - Andrew L. Ferguson
- Department of Physics, University of Illinois at Urbana−Champaign, 1110 West Green Street, Urbana, Illinois 61801, United States
- Department of Materials Science and Engineering, University of Illinois at Urbana−Champaign, 1304 W Green Street, Urbana, Illinois 61801, United States
- Department of Chemical and Biomolecular Engineering, University of Illinois at Urbana−Champaign, 600 South Mathews Avenue, Urbana, Illinois 61801, United States
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Konda M, Jadhav RG, Maiti S, Mobin SM, Kauffmann B, Das AK. Understanding the conformational analysis of gababutin based hybrid peptides. Org Biomol Chem 2018; 16:1728-1735. [DOI: 10.1039/c8ob00035b] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
A new class of gababutin-based tetrapeptide shows a C12/C10 hydrogen-bonded hybrid turn.
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Affiliation(s)
- Maruthi Konda
- Department of Chemistry
- Indian Institute of Technology Indore
- Indore 453552
- India
| | - Rohit G. Jadhav
- Department of Chemistry
- Indian Institute of Technology Indore
- Indore 453552
- India
| | - Sayan Maiti
- Department of Chemistry
- Indian Institute of Technology Indore
- Indore 453552
- India
| | - Shaikh M. Mobin
- Department of Chemistry
- Indian Institute of Technology Indore
- Indore 453552
- India
| | - Brice Kauffmann
- Université de Bordeaux
- CNRS
- UMS 3033
- INSERM US001 Institut Européen de Chimie et de Biologie (IECB)
- 33600 Pessac
| | - Apurba K. Das
- Department of Chemistry
- Indian Institute of Technology Indore
- Indore 453552
- India
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Biswas S, Samui S, Chakraborty A, Biswas S, De D, Ghosh U, Das AK, Naskar J. Insight into the binding of a non-toxic, self-assembling aromatic tripeptide with ct-DNA: Spectroscopic and viscositic studies. Biochem Biophys Rep 2017; 11:112-118. [PMID: 28955776 PMCID: PMC5614701 DOI: 10.1016/j.bbrep.2017.07.001] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2017] [Revised: 06/28/2017] [Accepted: 07/01/2017] [Indexed: 11/22/2022] Open
Abstract
The report describes the synthesis, self-association and DNA binding studies of an aromatic tripeptide H-Phe-Phe-Phe-OH (FFF). The peptide backbone adopts β-sheet conformation both in solid and solution. In aqueous solution, FFF self-assembles to form nanostructured aggregates. Interactions of this peptide with calf-thymus DNA (ct-DNA) have been studied using various biophysical techniques including ultraviolet (UV) absorption spectroscopy, fluorescence spectroscopy and circular dichroism (CD) spectroscopy. The value of mean binding constant calculated from UV and fluorescence spectroscopic data is (2.914 ± 0.74) x 103 M-1 which is consistent with an external binding mode. Fluorescence intercalator displacement (FID) assay, iodide quenching study, viscosity measurement and thermal denaturation study of DNA further confirm the groove binding mode of peptide, FFF with ct-DNA. MTT cell survival assay reveals very low cytotoxicity of the peptide toward human lung carcinoma cell line A549.
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Affiliation(s)
- Soumi Biswas
- Department of Biochemistry & Biophysics, University of Kalyani, Nadia, WB 741235, India
| | - Satyabrata Samui
- Department of Biochemistry & Biophysics, University of Kalyani, Nadia, WB 741235, India
| | - Arpita Chakraborty
- Department of Biochemistry & Biophysics, University of Kalyani, Nadia, WB 741235, India
| | - Sagar Biswas
- Department of Chemistry, Indian Institute of Technology, Indore, Khandwa Road, Indore 453552, India
| | - Debapriya De
- Department of Biochemistry & Biophysics, University of Kalyani, Nadia, WB 741235, India
| | - Utpal Ghosh
- Department of Biochemistry & Biophysics, University of Kalyani, Nadia, WB 741235, India
| | - Apurba K. Das
- Department of Chemistry, Indian Institute of Technology, Indore, Khandwa Road, Indore 453552, India
| | - Jishu Naskar
- Department of Biochemistry & Biophysics, University of Kalyani, Nadia, WB 741235, India
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8
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Hanabusa K, Ueda T, Takata S, Suzuki M. Synthesis of Fluorescent Gelators and Direct Observation of Gelation with a Fluorescence Microscope. Chemistry 2016; 22:16939-16949. [DOI: 10.1002/chem.201603295] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2016] [Indexed: 01/09/2023]
Affiliation(s)
- Kenji Hanabusa
- Interdisciplinary Graduate School of Science and; Technology Shinshu University; Ueda 386-8567 Japan
- Division of Frontier Fibers; Institute for Fiber Engineering, ICCER; Shinshu University; Ueda 386-8567 Japan
| | - Takuya Ueda
- Interdisciplinary Graduate School of Science and; Technology Shinshu University; Ueda 386-8567 Japan
| | - Shingo Takata
- Interdisciplinary Graduate School of Science and; Technology Shinshu University; Ueda 386-8567 Japan
| | - Masahiro Suzuki
- Interdisciplinary Graduate School of Science and; Technology Shinshu University; Ueda 386-8567 Japan
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9
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Konda M, Bhowmik S, Mobin SM, Biswas S, Das AK. Modulating Hydrogen Bonded Self-assembled Patterns and Morphological Features by a Change in Side Chain of Third Amino Acid of Synthetic γ- Amino Acid Based Tripeptides. ChemistrySelect 2016. [DOI: 10.1002/slct.201600557] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Maruthi Konda
- Department of Chemistry; Indian Institute of Technology Indore; Khandwa Road Indore 453552 India
| | - Soumitra Bhowmik
- Department of Chemistry; Indian Institute of Technology Indore; Khandwa Road Indore 453552 India
| | - Shaikh M. Mobin
- Department of Chemistry; Indian Institute of Technology Indore; Khandwa Road Indore 453552 India
| | - Sagar Biswas
- Department of Chemistry; Indian Institute of Technology Indore; Khandwa Road Indore 453552 India
| | - Apurba K. Das
- Department of Chemistry; Indian Institute of Technology Indore; Khandwa Road Indore 453552 India
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10
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Aaryashree, Biswas S, Sharma P, Awasthi V, Sengar BS, Das AK, Mukherjee S. Photosensitive ZnO-Graphene Quantum Dot Hybrid Nanocomposite for Optoelectronic Applications. ChemistrySelect 2016. [DOI: 10.1002/slct.201600149] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Aaryashree
- Hybrid Nanodevice Research Group (HNRG), Electrical Engineering; Indian Institute of Technology Indore; Khandwa Road, Simrol Indore 452020 India
- Department of Chemistry; Indian Institute of Technology Indore; Khandwa Road, Simrol Indore 452020 India
| | - Sagar Biswas
- Department of Chemistry; Indian Institute of Technology Indore; Khandwa Road, Simrol Indore 452020 India
| | - Pankaj Sharma
- Hybrid Nanodevice Research Group (HNRG), Electrical Engineering; Indian Institute of Technology Indore; Khandwa Road, Simrol Indore 452020 India
| | - Vishnu Awasthi
- Hybrid Nanodevice Research Group (HNRG), Electrical Engineering; Indian Institute of Technology Indore; Khandwa Road, Simrol Indore 452020 India
| | - Brajendra S. Sengar
- Hybrid Nanodevice Research Group (HNRG), Electrical Engineering; Indian Institute of Technology Indore; Khandwa Road, Simrol Indore 452020 India
| | - Apurba K. Das
- Department of Chemistry; Indian Institute of Technology Indore; Khandwa Road, Simrol Indore 452020 India
| | - Shaibal Mukherjee
- Hybrid Nanodevice Research Group (HNRG), Electrical Engineering; Indian Institute of Technology Indore; Khandwa Road, Simrol Indore 452020 India
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Das AK, Manna MK, Agrawal B, Mukherjee S. Synergistic Assembly of Peptide-Metal Hydroxide Hybrid Nanostructures for Electrochemical Capacitors. ChemistrySelect 2016. [DOI: 10.1002/slct.201600104] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Apurba K. Das
- Department of Chemistry; Indian Institute of Technology Indore; Indore India, Tel.: +91-(0)-731-243-8780
| | - Manoj K. Manna
- Department of Chemistry; Indian Institute of Technology Indore; Indore India, Tel.: +91-(0)-731-243-8780
| | - Bharati Agrawal
- Department of Chemistry; Indian Institute of Technology Indore; Indore India, Tel.: +91-(0)-731-243-8780
| | - Shaibal Mukherjee
- Hybrid Nanodevice Research Group (HNRG), Electrical Engineering; Indian Institute of Technology Indore; Indore India
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12
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Rasale DB, Konda M, Biswas S, Das AK. Controlling Peptide Self-Assembly through a Native Chemical Ligation/Desulfurization Strategy. Chem Asian J 2016; 11:926-35. [DOI: 10.1002/asia.201501458] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2015] [Indexed: 01/05/2023]
Affiliation(s)
- Dnyaneshwar B. Rasale
- Department of Chemistry; Indian Institute of Technology Indore; Khandwa Road Indore 452020 India
| | - Maruthi Konda
- Department of Chemistry; Indian Institute of Technology Indore; Khandwa Road Indore 452020 India
| | - Sagar Biswas
- Department of Chemistry; Indian Institute of Technology Indore; Khandwa Road Indore 452020 India
| | - Apurba K. Das
- Department of Chemistry; Indian Institute of Technology Indore; Khandwa Road Indore 452020 India
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13
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Kim Y, Jang G, Kim D, Kim J, Lee TS. Fluorescence sensing of glucose using glucose oxidase incorporated into a fluorophore-containing PNIPAM hydrogel. Polym Chem 2016. [DOI: 10.1039/c5py02026c] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
We present a new composite material composed of pH sensitive fluorescent dyes in a poly(N-isopropylacrylamide)-based hydrogel and incorporating glucose oxidase (GOx), which provides a platform for fluorescence sensing of glucose.
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Affiliation(s)
- Yongkyun Kim
- Organic and Optoelectronic Materials Laboratory
- Department of Advanced Organic Materials and Textile System Engineering
- Chungnam National University
- Daejeon 305-764
- Korea
| | - Geunseok Jang
- Organic and Optoelectronic Materials Laboratory
- Department of Advanced Organic Materials and Textile System Engineering
- Chungnam National University
- Daejeon 305-764
- Korea
| | - Daigeun Kim
- Organic and Optoelectronic Materials Laboratory
- Department of Advanced Organic Materials and Textile System Engineering
- Chungnam National University
- Daejeon 305-764
- Korea
| | - Jongho Kim
- Organic and Optoelectronic Materials Laboratory
- Department of Advanced Organic Materials and Textile System Engineering
- Chungnam National University
- Daejeon 305-764
- Korea
| | - Taek Seung Lee
- Organic and Optoelectronic Materials Laboratory
- Department of Advanced Organic Materials and Textile System Engineering
- Chungnam National University
- Daejeon 305-764
- Korea
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Du X, Zhou J, Shi J, Xu B. Supramolecular Hydrogelators and Hydrogels: From Soft Matter to Molecular Biomaterials. Chem Rev 2015; 115:13165-307. [PMID: 26646318 PMCID: PMC4936198 DOI: 10.1021/acs.chemrev.5b00299] [Citation(s) in RCA: 1278] [Impact Index Per Article: 142.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2015] [Indexed: 12/19/2022]
Abstract
In this review we intend to provide a relatively comprehensive summary of the work of supramolecular hydrogelators after 2004 and to put emphasis particularly on the applications of supramolecular hydrogels/hydrogelators as molecular biomaterials. After a brief introduction of methods for generating supramolecular hydrogels, we discuss supramolecular hydrogelators on the basis of their categories, such as small organic molecules, coordination complexes, peptides, nucleobases, and saccharides. Following molecular design, we focus on various potential applications of supramolecular hydrogels as molecular biomaterials, classified by their applications in cell cultures, tissue engineering, cell behavior, imaging, and unique applications of hydrogelators. Particularly, we discuss the applications of supramolecular hydrogelators after they form supramolecular assemblies but prior to reaching the critical gelation concentration because this subject is less explored but may hold equally great promise for helping address fundamental questions about the mechanisms or the consequences of the self-assembly of molecules, including low molecular weight ones. Finally, we provide a perspective on supramolecular hydrogelators. We hope that this review will serve as an updated introduction and reference for researchers who are interested in exploring supramolecular hydrogelators as molecular biomaterials for addressing the societal needs at various frontiers.
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Affiliation(s)
- Xuewen Du
- Department of Chemistry, Brandeis University, 415 South Street, Waltham, Massachusetts 02454, United States
| | - Jie Zhou
- Department of Chemistry, Brandeis University, 415 South Street, Waltham, Massachusetts 02454, United States
| | - Junfeng Shi
- Department of Chemistry, Brandeis University, 415 South Street, Waltham, Massachusetts 02454, United States
| | - Bing Xu
- Department of Chemistry, Brandeis University, 415 South Street, Waltham, Massachusetts 02454, United States
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Rasale DB, Das AK. Chemical reactions directed Peptide self-assembly. Int J Mol Sci 2015; 16:10797-820. [PMID: 25984603 PMCID: PMC4463676 DOI: 10.3390/ijms160510797] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2015] [Accepted: 05/04/2015] [Indexed: 01/12/2023] Open
Abstract
Fabrication of self-assembled nanostructures is one of the important aspects in nanoscience and nanotechnology. The study of self-assembled soft materials remains an area of interest due to their potential applications in biomedicine. The versatile properties of soft materials can be tuned using a bottom up approach of small molecules. Peptide based self-assembly has significant impact in biology because of its unique features such as biocompatibility, straight peptide chain and the presence of different side chain functionality. These unique features explore peptides in various self-assembly process. In this review, we briefly introduce chemical reaction-mediated peptide self-assembly. Herein, we have emphasised enzymes, native chemical ligation and photochemical reactions in the exploration of peptide self-assembly.
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Affiliation(s)
- Dnyaneshwar B Rasale
- Department of Chemistry, Indian Institute of Technology Indore, Khandwa Road, Indore 452017, India.
| | - Apurba K Das
- Department of Chemistry, Indian Institute of Technology Indore, Khandwa Road, Indore 452017, India.
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Manna MK, Pandey SK, Maity I, Mukherjee S, Das AK. Electrodeposited Lamellar Photoconductor Nanohybrids Driven by Peptide Self-Assembly. Chempluschem 2015; 80:583-590. [DOI: 10.1002/cplu.201402348] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2014] [Indexed: 11/08/2022]
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