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Karimvand SK, Abdollahi H. Designing optimal sensor arrays: leveraging hard modeling for improved performance. Mikrochim Acta 2024; 191:420. [PMID: 38916680 DOI: 10.1007/s00604-024-06506-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2024] [Accepted: 06/12/2024] [Indexed: 06/26/2024]
Abstract
In a sensor array system with the ability to design multiple sensor elements, selecting the optimal sensor elements can maximize the efficiency of the sensor array in responding to various analytes. This paper proposes the application of hard chemical modeling as a means to identify the optimal subset of indicator displacement assay (IDA)-based sensors in the array, aiming to achieve maximum performance for detection or quantification. The model governing all reactions in the IDA sensor and the model of the pure spectrum of active species are first determined. Next, by applying the model of the pure spectrum of active species (including the indicator and indicator-receptor complex) to each sensor element and taking into account the system's nonlinearity, corrected concentration profiles of active species are derived using the generalized classical least square (G-CLS) method. These corrected concentration profiles are utilized as the output signal for each sensor element. Finally, the dynamic ranges (DR) of each sensor element and subsequently the DR for all possible sensor arrays are determined.To assess the effectiveness of the sensor array through dynamic range analysis, an IDA-based sensor system comprising five different elements was designed. It was observed that sensors with a larger dynamic range, when arranged together in an array, are more efficient for the quantitative identification of analytes. However, simply increasing the number of elements in the sensor array may not necessarily enhance its effectiveness; instead, it could amplify the noise within the system. Additionally, multivariate fitting regression with Gaussian function (MFRG), a nonlinear calibration method, was applied to assess the prediction ability of all possible designed sensor arrays.
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Affiliation(s)
| | - Hamid Abdollahi
- Department of Chemistry, Institute for Advanced Studies in Basic Sciences, P.O. Box, Zanjan, 45195-1159, Iran.
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Mahram V, Abdollahi H, Khodadadi Karimvand S. Designing cost-effective optimal indicator displacement assay (IDA)-based sensor arrays for simultaneous quantification of sulfate and phosphate. Microchem J 2022. [DOI: 10.1016/j.microc.2022.108054] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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Bowyer AA, Mai AD, Guo H, New EJ. A pH-Based Single-Sensor Array for Discriminating Metal Ions in Water. Chem Asian J 2022; 17:e202200204. [PMID: 35388970 PMCID: PMC9325419 DOI: 10.1002/asia.202200204] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2022] [Revised: 03/24/2022] [Indexed: 11/16/2022]
Abstract
Human activities, such as mining and manufacturing, expose society and the natural environment to harmful levels of metal ions. Recently, optical sensor arrays for metal ion detection have become popular owing to their favourable features, such as facile sample preparation and the requirement of less expensive instrumentation compared to traditional, spectrometry‐based analysis techniques. Sensor arrays usually consist of numerous optical probes that are used in combination to generate unique analyte responses. In contrast, here we present an array that comprises a single fluorescent sensor, Coum4‐DPA, that produces unique responses to metal ions in different pH environments. With this simple sensing platform, we were able to classify 10 metal ions in different water sources and quantify Pb2+ in tap water using just one fluorescent sensor, a few pH buffers and two sets of spectral data. This novel approach significantly decreases time and costs associated with probe synthesis and data collection, making it highly transferrable to real‐world metal sensing applications.
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Affiliation(s)
- Amy A Bowyer
- School of Chemistry, The University of Sydney, Sydney, NSW, 2006, Australia
| | - Anthony D Mai
- School of Chemistry, The University of Sydney, Sydney, NSW, 2006, Australia
| | - Haobo Guo
- School of Chemistry, The University of Sydney, Sydney, NSW, 2006, Australia.,School of Biomedical Engineering, The University of Sydney, Sydney, NSW, 2006, Australia
| | - Elizabeth J New
- School of Chemistry, The University of Sydney, Sydney, NSW, 2006, Australia.,The University of Sydney Nano Institute (Sydney Nano), The University of Sydney, Sydney, NSW, 2006, Australia.,Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science, The University of Sydney, Sydney, NSW, 2006, Australia
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Li Y, Huangfu C, Ni L, Feng L. Using ratiometric indicator-displacement-assay in semi-quantitative colorimetric determination of tetracyclines. CHINESE JOURNAL OF ANALYTICAL CHEMISTRY 2022. [DOI: 10.1016/j.cjac.2022.100088] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Fan J, Qi L, Han H, Ding L. Array-Based Discriminative Optical Biosensors for Identifying Multiple Proteins in Aqueous Solution and Biofluids. Front Chem 2020; 8:572234. [PMID: 33330361 PMCID: PMC7673422 DOI: 10.3389/fchem.2020.572234] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2020] [Accepted: 10/14/2020] [Indexed: 12/18/2022] Open
Abstract
Identification of proteins is an important issue both in medical research and in clinical practice as a large number of proteins are closely related to various diseases. Optical sensor arrays with recognition ability have been flourished to apply for distinguishing multiple chemically or structurally similar analytes and analyzing unknown or mixed samples. This review gives an overview of the recent development of array-based discriminative optical biosensors for recognizing proteins and their applications in real samples. Based on the number of sensor elements and the complexity of constructing array-based discriminative systems, these biosensors can be divided into three categories, which include multi-element-based sensor arrays, environment-sensitive sensor arrays and multi-wavelength-based single sensing systems. For each strategy, the construction of sensing platform and detection mechanism are particularly introduced. Meanwhile, the differences and connections between different strategies were discussed. An understanding of these aspects may help to facilitate the development of novel discriminative biosensors and expand their application prospects.
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Affiliation(s)
- Junmei Fan
- Department of Chemistry, Taiyuan Normal University, Jinzhong, China
| | - Lu Qi
- Key Laboratory of Applied Surface and Colloid Chemistry, Ministry of Education, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi'an, China
| | - Hongfei Han
- Department of Chemistry, Taiyuan Normal University, Jinzhong, China
| | - Liping Ding
- Key Laboratory of Applied Surface and Colloid Chemistry, Ministry of Education, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi'an, China
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Bis-cyclometalated Ir(III) Complex-Based Electrogenerated Chemiluminescence Sensor Array for Discriminating Three Biothiols. JOURNAL OF ANALYSIS AND TESTING 2020. [DOI: 10.1007/s41664-020-00130-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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Fan J, Ding L. Single-system based discriminative optical sensors: different strategies and versatile applications. Analyst 2019; 143:3775-3788. [PMID: 29974083 DOI: 10.1039/c8an00235e] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Discriminative optical sensors with pattern recognition properties and high-throughput ability have been widely developed as they can distinguish multiple chemically similar analytes. Compared to traditional sensor arrays composed of a series of sensor elements, single-system based discriminative sensors using an array of optical changes at different wavelengths to provide input signals have drawn intensive attention recently. On the one hand, they can provide discrimination ability that is lack in using selective sensors; on the other hand, they can simplify the complex data acquisition process accompanied by multiple-element-based sensor arrays and reduce consumption of sensor samples. This tutorial review gives an overview of the development of single-system based discriminative optical sensors. Different strategies for the construction of single-system based discriminative sensors including dynamic combinatorial libraries, cross-reactive conjugated polymers, DNA G-quadruplex ensembles, combinatorial fluorescent molecular sensors, and fluorophore/surfactant aggregate ensembles are particularly introduced.
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Affiliation(s)
- Junmei Fan
- Key Laboratory of Applied Surface and Colloid Chemistry of Ministry of Education, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi'an, 710062, PR China.
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Smith DG, Topolnicki IL, Zwicker VE, Jolliffe KA, New EJ. Fluorescent sensing arrays for cations and anions. Analyst 2017; 142:3549-3563. [DOI: 10.1039/c7an01200d] [Citation(s) in RCA: 42] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
A review of fluorescent sensing arrays for anions and cations, highlighting promising strategies and directions for future research.
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Wang Y, Meng H, Jia M, Zhang Y, Li H, Feng L. Intraparticle FRET of Mn(ii)-doped carbon dots and its application in discrimination of volatile organic compounds. NANOSCALE 2016; 8:17190-17195. [PMID: 27605132 DOI: 10.1039/c6nr05927a] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
To achieve an energy transfer system in emissive nanoparticles, a conventional strategy is to graft an exterior fluorophore onto the surface of the host. In this paper, we report for the first time an intraparticle Förster resonance energy transfer (IPFRET) system formed intrinsically in Mn(ii)-doped carbon dots (MCDs). In virtue of the small particle size of MCDs and the modified band structure, intraparticle energy transfer from a fluorophore-like donor component to a metal-related acceptor component takes place. The IPFRET of MCDs was found to be sensitive to the chemical environment (e.g., polarity) via the effects of external influences on the metal-to-ligand charge transfer (MLCT). Surface enhanced Raman spectroscopy was employed to verify the MLCT-related metal-coordination conformation, and proved capable of collecting bonding information of metal-doped species of carbon dots. Benefitting from the sensitivity of the IPFRET signal, MCDs exhibited high potential in sensing applications.
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Affiliation(s)
- Yu Wang
- Key Lab of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, 116023, P. R. China.
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Wang Y, Kim SH, Feng L. Highly luminescent N, S- Co-doped carbon dots and their direct use as mercury(II) sensor. Anal Chim Acta 2015; 890:134-42. [DOI: 10.1016/j.aca.2015.07.051] [Citation(s) in RCA: 122] [Impact Index Per Article: 13.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2015] [Revised: 07/01/2015] [Accepted: 07/03/2015] [Indexed: 01/24/2023]
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