1
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Nashre-ul-Islam SM, Borah KK, Raza MA, Öztürkkan FE. Molecular docking with SARS-CoV-2 and potential drug property of a bioactive novel Zn(II) polymer: A combined experimental and theoretical study. Polyhedron 2023; 233:116304. [PMID: 36710999 PMCID: PMC9859646 DOI: 10.1016/j.poly.2023.116304] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2022] [Revised: 01/04/2023] [Accepted: 01/18/2023] [Indexed: 01/22/2023]
Abstract
A new Zn(II) coordination polymer based on o-phthalato (Phth) and 2-aminopyridine (2-Ampy) viz. {[Zn(2-Ampy)2(Phth)]∙(H2O)]}n (1) has been synthesized at room temperature and characterized by elemental analyses, electronic spectroscopy, FT-IR spectroscopy, thermal analysis (TGA/DSC), powder X-ray diffraction (PXRD) and single crystal X-ray diffraction. The basic trimeric units of 1 form a polymeric chain by N-H⋯O and π⋯π interactions. These polymeric chains interconnect through various non-covalent interactions in two perpendicular directions to ultimately give rise to a 3D architecture of 1. The interesting non-covalent interactions in 1, contributing to its stability in the solid state are studied by Hirshfeld surface analysis and other different theoretical tools. Molecular docking study of 1 is performed against six different proteins of SARS-CoV-2. The drug potential of the synthesized compound is evaluated by ADMET calculations.
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Affiliation(s)
| | | | - Muhammad Asam Raza
- Department of Chemistry, Hafiz Hayat Campus, University of Gujrat, Gujrat, Pakistan
| | - Füreya Elif Öztürkkan
- Department of Chemical Engineering, Kafkas University, Kars, Turkey,Corresponding authors
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2
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Effect of a lone electron pair and tetrel interactions on the structure of Pb(II) CPs constructed from pyrimidine carboxylates and auxiliary inorganic ions. Polyhedron 2022. [DOI: 10.1016/j.poly.2022.115818] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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3
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Bejan D, Bahrin LG, Cojocaru C, Trandabat AF, Marangoci NL, Rotaru A, Shova S. The use of C1 symmetry imidazole-carboxylate building block and auxiliary acetate co-ligand for assembly of a 2D wave-like zinc(II) coordination polymer: experimental and theoretical study. J COORD CHEM 2020. [DOI: 10.1080/00958972.2020.1818727] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Affiliation(s)
- Dana Bejan
- “Petru Poni” Institute of Macromolecular Chemistry, Romanian Academy, Iasi, Romania
| | | | - Corneliu Cojocaru
- “Petru Poni” Institute of Macromolecular Chemistry, Romanian Academy, Iasi, Romania
| | | | | | - Alexandru Rotaru
- “Petru Poni” Institute of Macromolecular Chemistry, Romanian Academy, Iasi, Romania
| | - Sergiu Shova
- “Petru Poni” Institute of Macromolecular Chemistry, Romanian Academy, Iasi, Romania
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4
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Mao S, Han X, Li C, Huang G, Shen K, Shi X, Wu H. Synthesis, crystal structure, fluorescence and electrochemical properties of two Ag(I) complexes based on 2-(4′-pyridyl)-benzoxazole/SPPh3 ligands. J COORD CHEM 2018. [DOI: 10.1080/00958972.2018.1514116] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Affiliation(s)
- Shanshan Mao
- School of Chemical and Biological Engineering, Lanzhou Jiaotong University, Lanzhou, Gansu, P. R. China
| | - Xintong Han
- School of Chemical and Biological Engineering, Lanzhou Jiaotong University, Lanzhou, Gansu, P. R. China
| | - Chuang Li
- School of Chemical and Biological Engineering, Lanzhou Jiaotong University, Lanzhou, Gansu, P. R. China
| | - Guozhen Huang
- School of Chemical and Biological Engineering, Lanzhou Jiaotong University, Lanzhou, Gansu, P. R. China
| | - Kesheng Shen
- School of Chemical and Biological Engineering, Lanzhou Jiaotong University, Lanzhou, Gansu, P. R. China
| | - Xinkui Shi
- School of Chemical and Biological Engineering, Lanzhou Jiaotong University, Lanzhou, Gansu, P. R. China
| | - Huilu Wu
- School of Chemical and Biological Engineering, Lanzhou Jiaotong University, Lanzhou, Gansu, P. R. China
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5
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Emerson AJ, Chahine A, Batten SR, Turner DR. Synthetic approaches for the incorporation of free amine functionalities in porous coordination polymers for enhanced CO2 sorption. Coord Chem Rev 2018. [DOI: 10.1016/j.ccr.2018.02.012] [Citation(s) in RCA: 41] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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6
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Skalenko YA, Druzhenko TV, Denisenko AV, Samoilenko MV, Dacenko OP, Trofymchuk SA, Grygorenko OO, Tolmachev AA, Mykhailiuk PK. [2+2]-Photocycloaddition of N-Benzylmaleimide to Alkenes As an Approach to Functional 3-Azabicyclo[3.2.0]heptanes. J Org Chem 2018. [DOI: 10.1021/acs.joc.8b00077] [Citation(s) in RCA: 33] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Yevhen A. Skalenko
- Enamine Ltd., Chervonotkatska 78, Kyiv 02094, Ukraine (www.enamine.net, www.mykhailiukchem.org)
- Institute of High Technologies, Academician Glushkov av. 4G, Kyiv 03022, Ukraine
| | - Tetiana V. Druzhenko
- Enamine Ltd., Chervonotkatska 78, Kyiv 02094, Ukraine (www.enamine.net, www.mykhailiukchem.org)
- Institute of High Technologies, Academician Glushkov av. 4G, Kyiv 03022, Ukraine
| | - Aleksandr V. Denisenko
- Enamine Ltd., Chervonotkatska 78, Kyiv 02094, Ukraine (www.enamine.net, www.mykhailiukchem.org)
- Department of Chemistry, Taras Shevchenko National University of Kyiv, Volodymyrska 64, Kyiv 01601, Ukraine
| | - Maryna V. Samoilenko
- Enamine Ltd., Chervonotkatska 78, Kyiv 02094, Ukraine (www.enamine.net, www.mykhailiukchem.org)
| | - Oleksandr P. Dacenko
- Enamine Ltd., Chervonotkatska 78, Kyiv 02094, Ukraine (www.enamine.net, www.mykhailiukchem.org)
| | - Serhii A. Trofymchuk
- Enamine Ltd., Chervonotkatska 78, Kyiv 02094, Ukraine (www.enamine.net, www.mykhailiukchem.org)
| | - Oleksandr O. Grygorenko
- Enamine Ltd., Chervonotkatska 78, Kyiv 02094, Ukraine (www.enamine.net, www.mykhailiukchem.org)
- Department of Chemistry, Taras Shevchenko National University of Kyiv, Volodymyrska 64, Kyiv 01601, Ukraine
| | - Andrey A. Tolmachev
- Enamine Ltd., Chervonotkatska 78, Kyiv 02094, Ukraine (www.enamine.net, www.mykhailiukchem.org)
- Department of Chemistry, Taras Shevchenko National University of Kyiv, Volodymyrska 64, Kyiv 01601, Ukraine
| | - Pavel K. Mykhailiuk
- Enamine Ltd., Chervonotkatska 78, Kyiv 02094, Ukraine (www.enamine.net, www.mykhailiukchem.org)
- Department of Chemistry, Taras Shevchenko National University of Kyiv, Volodymyrska 64, Kyiv 01601, Ukraine
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7
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Multifunctional Aromatic Carboxylic Acids as Versatile Building Blocks for Hydrothermal Design of Coordination Polymers. CRYSTALS 2018. [DOI: 10.3390/cryst8020083] [Citation(s) in RCA: 79] [Impact Index Per Article: 13.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Selected recent examples of coordination polymers (CPs) or metal-organic frameworks (MOFs) constructed from different multifunctional carboxylic acids with phenyl-pyridine or biphenyl cores have been discussed. Despite being still little explored in crystal engineering research, such types of semi-rigid, thermally stable, multifunctional and versatile carboxylic acid building blocks have become very promising toward the hydrothermal synthesis of metal-organic architectures possessing distinct structural features, topologies, and functional properties. Thus, the main aim of this mini-review has been to motivate further research toward the synthesis and application of coordination polymers assembled from polycarboxylic acids with phenyl-pyridine or biphenyl cores. The importance of different reaction parameters and hydrothermal conditions on the generation and structural types of CPs or MOFs has also been highlighted. The influence of the type of main di- or tricarboxylate ligand, nature of metal node, stoichiometry and molar ratio of reagents, temperature, and presence of auxiliary ligands or templates has been showcased. Selected examples of highly porous or luminescent CPs, compounds with unusual magnetic properties, and frameworks for selective sensing applications have been described.
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8
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Dalton HL, Lynes AD, Twamley B, Byrne K, Schmitt W, Hawes CS, Gunnlaugsson T. Exploring the reversible host–guest chemistry of a crystalline octanuclear Ag(i) metallosupramolecular macrocycle formed from a simple pyrazinylpyridine ligand. Dalton Trans 2018; 47:17266-17275. [DOI: 10.1039/c8dt04583f] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
High nuclearity Ag(i) assemblies are prepared from simple polytopic ligands, including an octanuclear metallomacrocycle which exhibits reversible and selective guest exchange.
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Affiliation(s)
- Hannah L. Dalton
- School of Chemistry and Trinity Biomedical Sciences Institute
- The University of Dublin
- Trinity College Dublin
- Dublin 2
- Ireland
| | - Amy D. Lynes
- School of Chemistry and Trinity Biomedical Sciences Institute
- The University of Dublin
- Trinity College Dublin
- Dublin 2
- Ireland
| | - Brendan Twamley
- School of Chemistry
- University of Dublin
- Trinity College
- Dublin 2
- Ireland
| | - Kevin Byrne
- School of Chemistry and Centre for Research on Adaptive Nanostructures and Nanodevices
- The University of Dublin
- Trinity College Dublin
- Dublin 2
- Ireland
| | - Wolfgang Schmitt
- School of Chemistry and Centre for Research on Adaptive Nanostructures and Nanodevices
- The University of Dublin
- Trinity College Dublin
- Dublin 2
- Ireland
| | - Chris S. Hawes
- School of Chemical and Physical Sciences
- Keele University
- Keele ST5 5BG
- UK
| | - Thorfinnur Gunnlaugsson
- School of Chemistry and Trinity Biomedical Sciences Institute
- The University of Dublin
- Trinity College Dublin
- Dublin 2
- Ireland
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9
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Spectroscopic (FT-IR, FT-Raman, UV, NMR, NLO) investigation and molecular docking study of 1-(4-Methylbenzyl) piperazine. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2016.12.048] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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10
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Hawes CS, Byrne K, Schmitt W, Gunnlaugsson T. Flexible Porous Coordination Polymers from Divergent Photoluminescent 4-Oxo-1,8-naphthalimide Ligands. Inorg Chem 2016; 55:11570-11582. [DOI: 10.1021/acs.inorgchem.6b02137] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Chris S. Hawes
- School
of Chemistry and Trinity Biomedical Sciences Institute (TBSI) and ‡School of Chemistry
and Centre for Research on Adaptive Nanostructures and Nanodevices
(CRANN), Trinity College Dublin, The University of Dublin, Dublin 2, Ireland
| | - Kevin Byrne
- School
of Chemistry and Trinity Biomedical Sciences Institute (TBSI) and ‡School of Chemistry
and Centre for Research on Adaptive Nanostructures and Nanodevices
(CRANN), Trinity College Dublin, The University of Dublin, Dublin 2, Ireland
| | - Wolfgang Schmitt
- School
of Chemistry and Trinity Biomedical Sciences Institute (TBSI) and ‡School of Chemistry
and Centre for Research on Adaptive Nanostructures and Nanodevices
(CRANN), Trinity College Dublin, The University of Dublin, Dublin 2, Ireland
| | - Thorfinnur Gunnlaugsson
- School
of Chemistry and Trinity Biomedical Sciences Institute (TBSI) and ‡School of Chemistry
and Centre for Research on Adaptive Nanostructures and Nanodevices
(CRANN), Trinity College Dublin, The University of Dublin, Dublin 2, Ireland
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11
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Hawes CS, Knowles GP, Chaffee AL, White KF, Abrahams BF, Batten SR, Turner DR. Porous Polyrotaxane Coordination Networks Containing Two Distinct Conformers of a Discontinuously Flexible Ligand. Inorg Chem 2016; 55:10467-10474. [DOI: 10.1021/acs.inorgchem.6b01713] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Chris S. Hawes
- School
of Chemistry, Monash University, Clayton, Victoria 3800, Australia
| | - Gregory P. Knowles
- School
of Chemistry, Monash University, Clayton, Victoria 3800, Australia
| | - Alan L. Chaffee
- School
of Chemistry, Monash University, Clayton, Victoria 3800, Australia
| | - Keith F. White
- School
of Chemistry, The University of Melbourne, Melbourne, Victoria 3010, Australia
| | - Brendan F. Abrahams
- School
of Chemistry, The University of Melbourne, Melbourne, Victoria 3010, Australia
| | - Stuart R. Batten
- School
of Chemistry, Monash University, Clayton, Victoria 3800, Australia
| | - David R. Turner
- School
of Chemistry, Monash University, Clayton, Victoria 3800, Australia
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12
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Hawes CS, Hamilton SE, Hicks J, Knowles GP, Chaffee AL, Turner DR, Batten SR. Coordination Chemistry and Structural Dynamics of a Long and Flexible Piperazine-Derived Ligand. Inorg Chem 2016; 55:6692-702. [DOI: 10.1021/acs.inorgchem.6b00933] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Chris S. Hawes
- School
of Chemistry, Monash University, Clayton, Victoria 3800, Australia
| | - Sophie E. Hamilton
- School
of Chemistry, Monash University, Clayton, Victoria 3800, Australia
| | - Jamie Hicks
- School
of Chemistry, Monash University, Clayton, Victoria 3800, Australia
| | - Gregory P. Knowles
- School
of Chemistry, Monash University, Clayton, Victoria 3800, Australia
| | - Alan L. Chaffee
- School
of Chemistry, Monash University, Clayton, Victoria 3800, Australia
| | - David R. Turner
- School
of Chemistry, Monash University, Clayton, Victoria 3800, Australia
| | - Stuart R. Batten
- School
of Chemistry, Monash University, Clayton, Victoria 3800, Australia
- Department
of Chemistry, Faculty of Science, King Abdulaziz University, Jeddah 21589, Saudi Arabia
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13
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Wang K, Qi XY, Wang QL, Ren HX, Ma Y, Cheng P, Liao DZ. 3D nickel(II) and cobalt(II) complexes based on 1,4-bis(1,2,4-triazol-1-yl)butane (btb) and PF6− synthons. Inorganica Chim Acta 2016. [DOI: 10.1016/j.ica.2015.11.014] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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14
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Fanna DJ, Zhang Y, Li L, Karatchevtseva I, Shepherd ND, Azim A, Price JR, Aldrich-Wright J, Reynolds JK, Li F. 3d transition metal complexes with a julolidine–quinoline based ligand: structures, spectroscopy and optical properties. Inorg Chem Front 2016. [DOI: 10.1039/c5qi00200a] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Five new complexes of a julolidine–quinoline based ligand with 3d transition metals have been synthesised and structurally characterised.
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Affiliation(s)
- Daniel J. Fanna
- School of Science and Health
- Western Sydney University
- Penrith
- Australia
| | - Yingjie Zhang
- Australian Nuclear Science and Technology Organisation
- Kirrawee DC
- Australia
| | - Li Li
- School of Science and Health
- Western Sydney University
- Penrith
- Australia
| | | | - Nicholas D. Shepherd
- School of Science and Health
- Western Sydney University
- Penrith
- Australia
- Australian Nuclear Science and Technology Organisation
| | - Abdul Azim
- School of Science and Health
- Western Sydney University
- Penrith
- Australia
| | | | | | - Jason K. Reynolds
- School of Science and Health
- Western Sydney University
- Penrith
- Australia
| | - Feng Li
- School of Science and Health
- Western Sydney University
- Penrith
- Australia
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15
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Hou X, Tang SF. Four new silver phosphonates constructed from semi-rigid phosphonate ligands: synthesis, structure and properties. RSC Adv 2016. [DOI: 10.1039/c6ra21382k] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022] Open
Abstract
Four new silver phosphonates with interesting structures and luminescent properties have been hydrothermally synthesized and systematically characterized.
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Affiliation(s)
- Xiaomin Hou
- College of Life Science
- Qingdao Agriculture University
- Qingdao 266109
- China
| | - Si-Fu Tang
- Qingdao Institute of Bioenergy and Bioprocess Technology
- Chinese Academy of Sciences
- Qingdao 266101
- China
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16
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Hawes CS, White KF, Abrahams BF, Knowles GP, Chaffee AL, Batten SR, Turner DR. Structural chemistry and selective CO2uptake of a piperazine-derived porous coordination polymer. CrystEngComm 2015. [DOI: 10.1039/c4ce02547d] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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