Crystal structure of (Z)-2-(tert-butyl)-5-((5-(tert- butyl)-2H-pyrrol-2-ylidene)(mesityl)methyl)-1H-pyrrole, C26H34N2

C26H34N2, orthorhombic, Pbca (no. 61), a = 14.8062(2) Å, b = 15.8918(2) Å, c = 20.0121(3) Å, V = 4708.79(11) Å3, Z = 8, Rgt (F) = 0.0548, wRref (F 2) = 0.1701, T = 296.2 K.

Crystal structure of 2-phenylethynyl-1,3,6,8-tetramethylBOPHY (BOPHY = bis(difluoroboron)-1,2-bis((1H-pyrrol-2-yl)methylene)hydrazine), C22H20B2F4N4

C22H20B2F4N4, orthorhombic, Pbca (no. 61), a = 9.2506(2) Å, b = 36.1677(13) Å, c = 12.9475(3) Å, V = 4331.9 Å3, Z = 8, R gt (F) = 0.0729, wR ref (F 2) = 0.1992, T = 294.4 K.

BOSHPY Fluorophores: BODIPY Analogues with Single Atom Controlled Aggregation

The reaction of diiminoisoindoline and iminoxoisoindoline with aminoazoles results in the formation of bidentate chelates that can be considered a semihemiporphyrazine. These chelates react with BF₃ to produce fluorescent compounds that are structurally analogous to the BODIPY dyes. These difluoroboron semihemiporphyrazines (BOSHPYs) aggregate, and the type of aggregation (H or J) is determined by a single atom at the periphery of the ligand (O or N). Notably, the imine terminated compounds remain fluorescent upon aggregation.

Crystal structure of 2-bromo-1,3,6,8-tetramethylBOPHY (BOPHY = bis(difluoroboron)-1,2-bis((1H-pyrrol-2-yl)methylene)hydrazine), C14H15B2BrF4N4

C14H15B2BrF4N4, orthorhombic, Pbca (no. 61), a = 11.970(1) Å, b = 10.049(1) Å, c = 27.847(1) Å, V = 3349.6 Å3, Z = 8, R gt(F) = 0.0697, wR ref(F 2) = 0.1585, T = 296 K.

CCDC no.: 2080820

The effect of hydrogen bonds on the ultrafast relaxation dynamics of a BODIPY dimer

The influence of hydrogen bonds (H-bonds) in the structure, dynamics, and functionality of biological and artificial complex systems is the subject of intense investigation. In this broad context, particular attention has recently been focused on the ultrafast H-bond dependent dynamical properties in the electronic excited state because of their potentially dramatic consequences on the mechanism, dynamics, and efficiency of photochemical reactions and photophysical processes of crucial importance for life and technology. Excited-state H-bond dynamics generally occur on ultrafast time scales of hundreds of femtoseconds or less, making the characterization of associated mechanisms particularly challenging with conventional time-resolved techniques. Here, 2D electronic spectroscopy is exploited to shed light on this still largely unexplored dynamic mechanism. An H-bonded molecular dimer prepared by self-assembly of two boron-dipyrromethene dyes has been specifically designed and synthesized for this aim. The obtained results confirm that upon formation of H-bonds and the dimer, a new ultrafast relaxation channel is activated in the ultrafast dynamics, mediated by the vibrational motions of the hydrogen donor and acceptor groups. This relaxation channel also involves, beyond intra-molecular relaxations, an inter-molecular transfer process. This is particularly significant considering the long distance between the centers of mass of the two molecules. These findings suggest that the design of H-bonded structures is a particularly powerful tool to drive the ultrafast dynamics in complex materials.

Fundamental studies to emerging applications of pyrrole-BF2 (BOPHY) fluorophores

This review highlights the up-and-coming pyrrole-BF₂ (BOPHY) fluorophores, with a focus on synthetic procedures, photophysical properties – including structure–property analyses – as well as emerging applications.

Synthesis pathways for the preparation of the BODIPY analogues: aza-BODIPYs, BOPHYs and some other pyrrole-based acyclic chromophores

This mini-review summarizes the synthesis strategies for the preparation and post-functionalization of aza-BODIPYs, BOPHYs, “half-Pcs”, biliazines, MB-DIPYs, semihemiporphyrazines, BOIMPYs, BOPPYs, BOPYPYs, BOAHYs, and BOAPYs.

Crystal structure of 2,7-diiodo-1,3,6,8-tetramethyl-bis(difluoroboron)-1,2-bis((1H-pyrrol-2-yl)methylene)hydrazine, C14H14B2F4I2N4

C14H15B2F4I2N4, triclinic, P1̄ (no. 2), a = 7.5458(7) Å, b = 8.5659(6) Å, c = 8.6089(5) Å, α = 108.189(6)°, β = 110.492(7)°, γ = 98.678(7)°, V = 473.6 Å3, Z = 1, R gt(F) = 0.0334, wR ref(F 2) = 0.0831, T = 296.5 K.

Optical spectroscopic properties recorded for simple BOPHY dyes in condensed media: The mirror-symmetry factor

The BOPHY structural scaffold provides opportunities for the synthesis of innumerable derivatives with linear geometries and well-controlled π-conjugation pathways. The simpler BOPHY chromophores are highly fluorescent but exhibit poor mirror symmetry between absorption and fluorescence spectra at ambient temperature. In particular, the absorption (and excitation) spectra are broad and appear as two overlapping bands of comparable intensity. In constrained media, such as low-temperature rigid glasses or stretched poly(ethylene) films, mirror symmetry is restored. Analysis of the temperature dependence recorded for simple BOPHY derivatives indicates that the vibronic envelope accompanying the electronic transitions can be well described in terms of low- and medium-frequency modes. Whereas the fluorescence spectral profile is only weakly dependent on temperature, the excitation spectrum is far more affected. The magnitude of the low-frequency mode, and the associated electron-phonon coupling, increase substantially with increasing temperature and is responsible for temperature broadening and distortion of the excitation spectrum in solution. This critical low-frequency vibronic mode is associated with out-of-plane torsional bending of the BOPHY unit. Variable temperature NMR studies failed to provide unequivocal evidence for conformational changes of one of the derivatives over the temperature range 193-353 K.

Ultrafast Transient Absorption Spectra of Photoexcited YOYO-1 molecules call for additional investigations of their fluorescence quenching mechanism

In this report, we observed that YOYO-1 immobilized on a glass surface is much brighter when dried (quantum yield 16±4% in the ambient air) or in hexane than in water (quantum yield ~%).YOYO-1 is a typical cyanine dye that has a photo-isomerization reaction upon light illumination. In order to understand this quenching mechanism, we use femtosecond transient absorption spectroscopy to measure YOYO-1's electron dynamics after excitation directly. By deconvoluting the hot-ground-state absorption and the stimulated emission, the dynamics of electronic relaxation and balance are revealed. The results support the intermolecular charge transfer mechanism better than the intramolecular relaxation mechanism that has been widely believed before. We believe that the first step of the relaxation involves a Dexter charge transfer between the photo-excited YOYO-1 molecule and another guest molecule that is directly bound to the YOYO-1 giving two radicals with opposite signs of charges. The charges are recombined either directly between these two molecules, or both molecules start to rotate and separate from each other. Eventually, the two charges recombined non-radiatively via various pathways. These pathways are reflected on the complicated multi-exponential decay curves of YOYO-1 fluorescence lifetime measurements. This charge transfer mechanism suggests that (1) electrical insulation may help improve the quantum yield of YOYO-1 in polar solutions significantly and (2) a steric hindrance for the intramolecular rotation may have a less significant effect.

Disentanglement of excited-state dynamics with implications for FRET measurements: two-dimensional electronic spectroscopy of a BODIPY-functionalized cavitand

Two-dimensional electronic spectroscopy of energy transfer and competing dynamics highlights how conformational changes create issues with lifetime-based FRET measurements.

Förster Resonance Energy Transfer (FRET) is the incoherent transfer of an electronic excitation from a donor fluorophore to a nearby acceptor. FRET has been applied as a probe of local chromophore environments and distances on the nanoscale by extrapolating transfer efficiencies from standard experimental parameters, such as fluorescence intensities or lifetimes. Competition from nonradiative relaxation processes is often assumed to be constant in these extrapolations, but in actuality, this competition depends on the donor and acceptor environments and can, therefore, be affected by conformational changes. To study the effects of nonradiative relaxation on FRET dynamics, we perform two-dimensional electronic spectroscopy (2DES) on a pair of azaboraindacene (BODIPY) dyes, attached to opposite arms of a resorcin[4]arene cavitand. Temperature-induced switching between two equilibrium conformations, vase at 294 K to kite at 193 K, increases the donor–acceptor distance from 0.5 nm to 3 nm, affecting both FRET efficiency and nonradiative relaxation. By disentangling different dynamics based on lifetimes extracted from a series of 2D spectra, we independently observe nonradiative relaxation, FRET, and residual fluorescence from the donor in both vase to kite conformations. We observe changes in both FRET rate and nonradiative relaxation when the molecule switches from vase to kite, and measure a significantly greater difference in transfer efficiency between conformations than would be determined by standard lifetime-based measurements. These observations show that changes in competing nonradiative processes must be taken into account when highly accurate measurements of FRET efficiency are desired.

A turn-on fluorescent BOPHY probe for Cu2+ ion detection

A novel D–π–A type fluorine–boron compound BOPHY-PTZ was synthesized and employed as a “turn on” fluorescent probe for the sensitive detection of Cu²⁺ ions.

A Ratiometric Fluorescent Sensor for Cd2+ Based on Internal Charge Transfer

This work reports on a novel fluorescent sensor 1 for Cd²⁺ ion based on the fluorophore of tetramethyl substituted bis(difluoroboron)-1,2-bis[(1H-pyrrol-2-yl)methylene]hydrazine (Me₄BOPHY), which is modified with an electron donor moiety of N,N-bis(pyridin-2-ylmethyl)benzenamine. Sensor 1 has absorption and emission in visible region, at 550 nm and 675 nm, respectively. The long wavelength spectral response makes it easier to fabricate the fluorescence detector. The sensor mechanism is based on the tunable internal charge transfer (ICT) transition of molecule 1. Binding of Cd²⁺ ion quenches the ICT transition, but turns on the π − π transition of the fluorophore, thus enabling ratiometric fluorescence sensing. The limit of detection (LOD) was projected down to 0.77 ppb, which is far below the safety value (3 ppb) set for drinking water by World Health Organization. The sensor also demonstrates a high selectivity towards Cd²⁺ in comparison to other interferent metal ions.

Investigating the optical properties of BOIMPY dyes using ab initio tools

Using a computational approach combining Time-Dependent Density Functional Theory (TD-DFT) and second-order Coupled Cluster (CC2) approaches, we investigate the spectral properties of a large panel of BOIMPY dyes.

Using Hydrazine to Link Ferrocene with Re(CO)3: A Modular Approach

Acetyl ferrocene and diacetyl ferrocene both readily react with an excess of hydrazine to afford the corresponding hydrazone compounds. These compounds can then be linked to Re(CO)₃ via a metal-mediated Schiff base reaction, resulting in a series of ferrocene-Re(CO)₃ conjugates with different stoichiometries. Conjugates with 1:1, 1:2, and 2:1 ferrocene: Re(CO)₃ ratios can be produced via this "modular" type synthesis approach. Several examples of these conjugates were structurally characterized, and their spectroscopic, electrochemical, and spectroelectrochemical behaviors were investigated. The electronic structures of these compounds were also probed using DFT and TDDFT calculations.

Boron templated synthesis of a BODIPY analogue from a phthalocyanine precursor

The synthesis of aza(dibenzopyrro)methenes (ADBMs) using aryl boron compounds as templates is described. Compounds (1–3) are structurally related to the BODIPYs and were isolated with terminal imine, oxo, or mixed imine-oxo groups. Compounds 1–3 were investigated for their absorption/emission properties, and were probed by DFT and TDDFT methods.

Synthesis and characterization of conjugated/cross-conjugated benzene-bridged boron difluoride formazanate dimers

A study designed to probe the effect of electronic conjugation and cross-conjugation on the optical and electrochemical properties of benzene-bridged boron difluoride formazanate dimers is presented.

Thienyl-BOPHY dyes as promising templates for bulk heterojunction solar cells

BOPHY dyes absorbing in the 400–800 nm range give a PCE as high as 4.3% with an EQE higher than 70%.